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The map label for this gene is 183222175

Identifier: 183222175

GI number: 183222175

Start: 2913268

End: 2914365

Strand: Reverse

Name: 183222175

Synonym: LEPBI_I2820

Alternate gene names: NA

Gene position: 2914365-2913268 (Counterclockwise)

Preceding gene: 183222176

Following gene: 183222168

Centisome position: 80.96

GC content: 32.42

Gene sequence:

>1098_bases
ATGAATTTGATTCCAATTGTAGGGGCGGTGGTATCTTTTTTATTGGCCATTTCGTATTGGATTGAATCGATTCAGAAAGA
GATTGGAAAAAACAAAAACTATTTTCAATTGGTTTTCCATGATTCGCCACCTATATTTTTATTTCTCTCTGTGACGGTTT
TGTTACTTCATATCTATTGTGAATTGACAAACCAAATTCATTCCATTCCATTTTTCTATGGAATTCATGTTCCGAGTATT
TTTCTCATAGGACCTCTTAGTTATCTTTTTTTTGAAGAAATGAGTGGCGAAACTTTTTTTAAAATCCGATTTTTACATTT
TATCCCAAGCATTTGGTGTCTCTTTTTGGTTTATAGTTTTAAACCAGATGGATATCAGCTTTCTACTTTGACCTCTGATC
ATCCGAATCTAAAATCTTTTACTGATTGGATCAACTTTCTCCTAGGGTTCGGAGTTGTATCGATTTTGATTTATATTCTG
ATGATATTGGTTCGGGTACTCCGTTGGAAATTGCAATCGAAGGGAAAAATCGAATCTTCATTCCACCCATTTTTATTTTT
ACTGATTTATTCCCTTTTTGTAATAGTTTTGTTTGTTTTGGCTCAATTGGCTTTTATGGATCTTTTTTTACCTGCTTGTT
TTGCATTCACCTTACTTTTGGTTACGTTACTGATCGTAAGAATGAATTTTAGAGATTACCTAGGTCATTTTAAAGCAGAA
ATACGTGATGCACGTTATAAAGAAAGTAGGTTGAAGGGAGTTGATATTCCTATGGTTTTACAACGTATGGAAGAATTAAT
GAAATTGGATCGACTGTATTTGAATGATCGATTGACATTAACAAGTTTGGCAAAACGATTAGAAATCAATACTCATCAAC
TTTCAGAGATATTAAATACGAAGTTAGGTTGTTCTTTTCGTAATTATATCAATCAATTCCGATTGTTGGAAGCAGAGAAA
ATGCTTTTGGAAAAACGTGAGATGACAATTCTAAATATCATCTATGCTTCTGGATTTAATTCTAAATCATCGTTTCATAA
ACTCTTTCAAGATCGGTATGGAGTTTCTCCTCAAATCTATCGATCAAAATCCAAATGA

Upstream 100 bases:

>100_bases
ATTTTGAAATTTGTCGTCCGTTTGGATACAGATGGAACAAATTTACCTAAGATTCGATTAAAAAAATAGACAATCTTCTT
TTCGATTCCTGTATAGTGTT

Downstream 100 bases:

>100_bases
AAATGTGTGAATCCATCCTTCGGGTCTTGGATTCCCATCTAACGTTAGGGATACGCAGGGTTTAGTCGCCTGCCATCGTT
AGATGGCTGGGGACGGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Arac Family; RhaRS Operon Positive Regulator; Regulatory Helix-Turn-Helix Protein AraC Family; AraC Family Transcription Regulator; Transcriptional Regulator AraC Family Domain Protein; Helix-Turn-Helix- Domain Containing Protein AraC Type; Helix-Turn-Helix AraC Type; Transcription Regulator

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLSVTVLLLHIYCELTNQIHSIPFFYGIHVPSI
FLIGPLSYLFFEEMSGETFFKIRFLHFIPSIWCLFLVYSFKPDGYQLSTLTSDHPNLKSFTDWINFLLGFGVVSILIYIL
MILVRVLRWKLQSKGKIESSFHPFLFLLIYSLFVIVLFVLAQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAE
IRDARYKESRLKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNTKLGCSFRNYINQFRLLEAEK
MLLEKREMTILNIIYASGFNSKSSFHKLFQDRYGVSPQIYRSKSK

Sequences:

>Translated_365_residues
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLSVTVLLLHIYCELTNQIHSIPFFYGIHVPSI
FLIGPLSYLFFEEMSGETFFKIRFLHFIPSIWCLFLVYSFKPDGYQLSTLTSDHPNLKSFTDWINFLLGFGVVSILIYIL
MILVRVLRWKLQSKGKIESSFHPFLFLLIYSLFVIVLFVLAQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAE
IRDARYKESRLKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNTKLGCSFRNYINQFRLLEAEK
MLLEKREMTILNIIYASGFNSKSSFHKLFQDRYGVSPQIYRSKSK
>Mature_365_residues
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLSVTVLLLHIYCELTNQIHSIPFFYGIHVPSI
FLIGPLSYLFFEEMSGETFFKIRFLHFIPSIWCLFLVYSFKPDGYQLSTLTSDHPNLKSFTDWINFLLGFGVVSILIYIL
MILVRVLRWKLQSKGKIESSFHPFLFLLIYSLFVIVLFVLAQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAE
IRDARYKESRLKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNTKLGCSFRNYINQFRLLEAEK
MLLEKREMTILNIIYASGFNSKSSFHKLFQDRYGVSPQIYRSKSK

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42826; Mature: 42826

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure
MNLIPIVGAVVSFLLAISYWIESIQKEIGKNKNYFQLVFHDSPPIFLFLSVTVLLLHIYC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
ELTNQIHSIPFFYGIHVPSIFLIGPLSYLFFEEMSGETFFKIRFLHFIPSIWCLFLVYSF
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
KPDGYQLSTLTSDHPNLKSFTDWINFLLGFGVVSILIYILMILVRVLRWKLQSKGKIESS
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FHPFLFLLIYSLFVIVLFVLAQLAFMDLFLPACFAFTLLLVTLLIVRMNFRDYLGHFKAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRDARYKESRLKGVDIPMVLQRMEELMKLDRLYLNDRLTLTSLAKRLEINTHQLSEILNT
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHH
KLGCSFRNYINQFRLLEAEKMLLEKREMTILNIIYASGFNSKSSFHKLFQDRYGVSPQIY
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
RSKSK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA