| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222167
Identifier: 183222167
GI number: 183222167
Start: 2906149
End: 2907621
Strand: Reverse
Name: 183222167
Synonym: LEPBI_I2812
Alternate gene names: NA
Gene position: 2907621-2906149 (Counterclockwise)
Preceding gene: 183222168
Following gene: 183222166
Centisome position: 80.77
GC content: 37.61
Gene sequence:
>1473_bases ATGAAAATCAAATCCAACCTACTTTTAGTTTTGATCCTATTGACAGCATTTGTTGTCAATTGTGGGAAAAAACTTCATTT TTCAATGGTGACTTCTACTTCCATGGAGAATGGACTTCCCTTTCTCCTGTTAGATGGAAGTGAATGGAAAGCGGAACCGG GTGCTGAATTTGTCAAAGTACATTTTTATGCAGACAATGCTTTTCCTTTGACCAAGGTTTCGATTGAATCATGTGGTGGC CAGTTCAAAGATCGGATCGCAGCGTATGTTAACTTTGATGAAGTGTATGCGAGTACGGACATTGAAAAATCGAATTCAGA AGTTTTATTTGATCCAGTTGTGCAAGCGCGTTCGGTGACATTGAATTTTCAAAGGAATCAGAATATTTGTCTAAAATCTG TAAAGTTTTACGATGAAAGCAAAAAAGCATATCGAACCTTCACTCCTGAAGTCATTTCGGGTTCTGTCACTGCTTCTGAG ACCGCATCTCCGGAACCAACTTATTCTGTTATGAATCTCTTTGATTCCAAGTATGAAAACGGATATGCTTCCGTGAAAGG TGGAGTTGGAGTTTCGTTTAACTTTAATTTTGCGAAATCTAAAAAGATATCAGTAATCAAAATTTGGAACGGTTATCAAA GATCAGATGTTCACTGCATCAAAAATGGTAGGGTAAAATCTTTTTTAATCACTGGCGATGATGGTTATTCCGCAAAAATC AATGTGGAGGATACAATGGGAAGCCAAGAGATCCAACTTCCAACGACATTCCAAGGCAAAAATCTAACCATGAAAGTGGA AGAGATTTATCCAGGATATTCGGAAAAAGGAATTGTACTATCAGAGCTTCGATTTGGGCATGATGGGGATTGGTTTGTTT TGGACACTCTCCCTAAATCAAAAGACACAGCTTCTAAAAATTTTGAATCTTTTACAAAAGCATCTCTCCGGATGGTATTG AATCGTGGATTGACAGGAAGGGAAGTGTATGCAGTGTCAGGTGACGAAGTTGTCACAGACCAACCTGCGGGAGCTGAGAA CCAAGTCCCTATTGAAGAGAATATGGATCCACCTACATCTTCTGATTGGACCATTCGATTCAGGTCGGACGGAACCTTCT TTTTAGAAGGTTCAACCGCAAGAACCAATTATGATGCGGGTGAAGAAAGTTCGAATCGTTTTTATGGACTTGGTAATTAT GAAGTAAAAGAAATGACTCCTGGCAAAATTCAACTTCGCATCTTTGGATTTTTAAGGAAACAAACATTCACAAACTTTTT AGATTACGGTGGTGGCGATTGTAATGGATGTGGTAGGGATTGTAATATGGTAAAAAATCCTGACCCAAACAATACTGAGA AAATATTCCAAGAATTTGTTACCTTACAAATCAAAGGAAAACAGTTTTATCTCATCAATTCTAAAAAAACAAATAACTTA GATTTTTCAACGTTAGAACTGAATTTAGAGTAA
Upstream 100 bases:
>100_bases AAACTTGGGAAAGAGTCTTGGAAGACACAAAACCTTAAAAAAATTCCTTGCGTTTTTCCGTACATTCGGTTCATTAAATG CACATTTTAAAGGACCAACA
Downstream 100 bases:
>100_bases AACGAAATGATCAGTTTTTGGATTCGAAATTCGGTTGTTCGTTTCGTAGTATTGGCGTTCTGTTTTTTTATCTTTTCTTG TGATGAAAAAGAAAAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 490; Mature: 490
Protein sequence:
>490_residues MKIKSNLLLVLILLTAFVVNCGKKLHFSMVTSTSMENGLPFLLLDGSEWKAEPGAEFVKVHFYADNAFPLTKVSIESCGG QFKDRIAAYVNFDEVYASTDIEKSNSEVLFDPVVQARSVTLNFQRNQNICLKSVKFYDESKKAYRTFTPEVISGSVTASE TASPEPTYSVMNLFDSKYENGYASVKGGVGVSFNFNFAKSKKISVIKIWNGYQRSDVHCIKNGRVKSFLITGDDGYSAKI NVEDTMGSQEIQLPTTFQGKNLTMKVEEIYPGYSEKGIVLSELRFGHDGDWFVLDTLPKSKDTASKNFESFTKASLRMVL NRGLTGREVYAVSGDEVVTDQPAGAENQVPIEENMDPPTSSDWTIRFRSDGTFFLEGSTARTNYDAGEESSNRFYGLGNY EVKEMTPGKIQLRIFGFLRKQTFTNFLDYGGGDCNGCGRDCNMVKNPDPNNTEKIFQEFVTLQIKGKQFYLINSKKTNNL DFSTLELNLE
Sequences:
>Translated_490_residues MKIKSNLLLVLILLTAFVVNCGKKLHFSMVTSTSMENGLPFLLLDGSEWKAEPGAEFVKVHFYADNAFPLTKVSIESCGG QFKDRIAAYVNFDEVYASTDIEKSNSEVLFDPVVQARSVTLNFQRNQNICLKSVKFYDESKKAYRTFTPEVISGSVTASE TASPEPTYSVMNLFDSKYENGYASVKGGVGVSFNFNFAKSKKISVIKIWNGYQRSDVHCIKNGRVKSFLITGDDGYSAKI NVEDTMGSQEIQLPTTFQGKNLTMKVEEIYPGYSEKGIVLSELRFGHDGDWFVLDTLPKSKDTASKNFESFTKASLRMVL NRGLTGREVYAVSGDEVVTDQPAGAENQVPIEENMDPPTSSDWTIRFRSDGTFFLEGSTARTNYDAGEESSNRFYGLGNY EVKEMTPGKIQLRIFGFLRKQTFTNFLDYGGGDCNGCGRDCNMVKNPDPNNTEKIFQEFVTLQIKGKQFYLINSKKTNNL DFSTLELNLE >Mature_490_residues MKIKSNLLLVLILLTAFVVNCGKKLHFSMVTSTSMENGLPFLLLDGSEWKAEPGAEFVKVHFYADNAFPLTKVSIESCGG QFKDRIAAYVNFDEVYASTDIEKSNSEVLFDPVVQARSVTLNFQRNQNICLKSVKFYDESKKAYRTFTPEVISGSVTASE TASPEPTYSVMNLFDSKYENGYASVKGGVGVSFNFNFAKSKKISVIKIWNGYQRSDVHCIKNGRVKSFLITGDDGYSAKI NVEDTMGSQEIQLPTTFQGKNLTMKVEEIYPGYSEKGIVLSELRFGHDGDWFVLDTLPKSKDTASKNFESFTKASLRMVL NRGLTGREVYAVSGDEVVTDQPAGAENQVPIEENMDPPTSSDWTIRFRSDGTFFLEGSTARTNYDAGEESSNRFYGLGNY EVKEMTPGKIQLRIFGFLRKQTFTNFLDYGGGDCNGCGRDCNMVKNPDPNNTEKIFQEFVTLQIKGKQFYLINSKKTNNL DFSTLELNLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54846; Mature: 54846
Theoretical pI: Translated: 5.43; Mature: 5.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKSNLLLVLILLTAFVVNCGKKLHFSMVTSTSMENGLPFLLLDGSEWKAEPGAEFVKV CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCEEEECCCCCCCCCCCEEEEE HFYADNAFPLTKVSIESCGGQFKDRIAAYVNFDEVYASTDIEKSNSEVLFDPVVQARSVT EEEECCCCCEEEEEHHHCCCHHHHHEEEEEEHHHHHCCCCCCCCCCCEEECCCCCEEEEE LNFQRNQNICLKSVKFYDESKKAYRTFTPEVISGSVTASETASPEPTYSVMNLFDSKYEN EEEECCCCEEEEEEEHHCCCCHHHEECCHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCC GYASVKGGVGVSFNFNFAKSKKISVIKIWNGYQRSDVHCIKNGRVKSFLITGDDGYSAKI CEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEEEE NVEDTMGSQEIQLPTTFQGKNLTMKVEEIYPGYSEKGIVLSELRFGHDGDWFVLDTLPKS EEHHCCCCCEEECCCEECCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCC KDTASKNFESFTKASLRMVLNRGLTGREVYAVSGDEVVTDQPAGAENQVPIEENMDPPTS CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCHHCCCCCCCC SDWTIRFRSDGTFFLEGSTARTNYDAGEESSNRFYGLGNYEVKEMTPGKIQLRIFGFLRK CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEEHHHH QTFTNFLDYGGGDCNGCGRDCNMVKNPDPNNTEKIFQEFVTLQIKGKQFYLINSKKTNNL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCCC DFSTLELNLE CEEEEEEEEC >Mature Secondary Structure MKIKSNLLLVLILLTAFVVNCGKKLHFSMVTSTSMENGLPFLLLDGSEWKAEPGAEFVKV CCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCHHCCCCEEEECCCCCCCCCCCEEEEE HFYADNAFPLTKVSIESCGGQFKDRIAAYVNFDEVYASTDIEKSNSEVLFDPVVQARSVT EEEECCCCCEEEEEHHHCCCHHHHHEEEEEEHHHHHCCCCCCCCCCCEEECCCCCEEEEE LNFQRNQNICLKSVKFYDESKKAYRTFTPEVISGSVTASETASPEPTYSVMNLFDSKYEN EEEECCCCEEEEEEEHHCCCCHHHEECCHHHHCCCEECCCCCCCCCCHHHHHHHHHHCCC GYASVKGGVGVSFNFNFAKSKKISVIKIWNGYQRSDVHCIKNGRVKSFLITGDDGYSAKI CEEEECCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEECCCCEEEEEEECCCCCEEEE NVEDTMGSQEIQLPTTFQGKNLTMKVEEIYPGYSEKGIVLSELRFGHDGDWFVLDTLPKS EEHHCCCCCEEECCCEECCCCEEEEEHHHCCCCCCCCEEEEEEECCCCCCEEEEECCCCC KDTASKNFESFTKASLRMVLNRGLTGREVYAVSGDEVVTDQPAGAENQVPIEENMDPPTS CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCCCCCCCHHCCCCCCCC SDWTIRFRSDGTFFLEGSTARTNYDAGEESSNRFYGLGNYEVKEMTPGKIQLRIFGFLRK CCEEEEEECCCEEEEECCCCCCCCCCCCCCCCEEEECCCEEEEECCCCEEEEEEEEHHHH QTFTNFLDYGGGDCNGCGRDCNMVKNPDPNNTEKIFQEFVTLQIKGKQFYLINSKKTNNL HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCEEEEEECCCCCCC DFSTLELNLE CEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA