Click here to switch to the map view.

The map label for this gene is pdtaS [H]

Identifier: 183222136

GI number: 183222136

Start: 2877444

End: 2878382

Strand: Reverse

Name: pdtaS [H]

Synonym: LEPBI_I2779

Alternate gene names: 183222136

Gene position: 2878382-2877444 (Counterclockwise)

Preceding gene: 183222137

Following gene: 183222130

Centisome position: 79.96

GC content: 31.63

Gene sequence:

>939_bases
ATGAACGTCATTGTCATTTTGAATGTATTGTCGCTTCTGGTCTACTTAGTTGCTGCTTTACAAATTACAGTATTACTTTT
CAAAAAACCTAATTTTCGTGGAGAAGGCACATTCTTAATCCTATTAGCGTTAATTCCATGTTATGTGAATATTTCAAATA
TATTTGAACATGGATTTATGATGGATTATTTTGATGATTACGAAGGTTTTTTTAAAGATTTGTATGCAATGTTCATTTTA
ATCTTTTTGTATGTTCATACGATAAAAAAAGAACAAAAAACGAGAACTGAGCACGAGTTCCAAATCAAATCTGATTTAAA
GTTAAAATCAAAATTACTCACAGAAATTCATCACCGAGTGAACAATAACTTACAAATCATTTCTGGATTGATGGCCCTTC
AAATCGAATCTGAAAATGATGAAAAATTGACAACTTCGCTTAACTTAATTCAGAATCGTATCAAAGCGATAGCTTCTGTT
CATAAATTGATTTATGGATCACCTAACTTACTATTTGTAAATTTAAACCAAATTTTTAATTCAATTTTGAGTAATTTGAA
AATTACATACTTAAAAGAACATGCTGAAATAGAGTTTCGTGAACTGATCGAAGAAGGACTTGAGATGGATCTGGATCGAG
CCATTCCCATTGGGTTGATTTTGAACGAACTTGTTTCCAATTGTTTTCGCCATGCGTTTAAGTATGGAAAACAAGGGTTT
ATCGAAGTTAGTATGGGTCGACTGAATGATGAATTTGTATTGATCGTTCGAGATAATGGAATCGGGATGGAAATTGATCC
AGATGGCAAAGGGATTGGATTGATGTTAGTGAGAAATTTAGTCAAACAATTACGTGGAAATCTTGTCATTGGAAGTAATC
AAGGTGTGAGTTTTGAAATTAGATTTCCAATTATCAATGCTAACCCGATACAAATATAA

Upstream 100 bases:

>100_bases
CCAGAAATTTTTAACCTTCTCGAACATAGCTTTTATTTTTTATCTTCCATATGTTTTCTCTTTAGTATCAAGATGGAAAT
TCTCGGTAATCACTAGTAAT

Downstream 100 bases:

>100_bases
TTTTCTATTTAGAGCAACAAAATCTCTTCGAGCTTTGTAATTTGGTAGTTTGATTGTTGTCGGAAAGGAAACGATCCGGA
TGGATCGATATAAATTGTGT

Product: putative two-component sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MNVIVILNVLSLLVYLVAALQITVLLFKKPNFRGEGTFLILLALIPCYVNISNIFEHGFMMDYFDDYEGFFKDLYAMFIL
IFLYVHTIKKEQKTRTEHEFQIKSDLKLKSKLLTEIHHRVNNNLQIISGLMALQIESENDEKLTTSLNLIQNRIKAIASV
HKLIYGSPNLLFVNLNQIFNSILSNLKITYLKEHAEIEFRELIEEGLEMDLDRAIPIGLILNELVSNCFRHAFKYGKQGF
IEVSMGRLNDEFVLIVRDNGIGMEIDPDGKGIGLMLVRNLVKQLRGNLVIGSNQGVSFEIRFPIINANPIQI

Sequences:

>Translated_312_residues
MNVIVILNVLSLLVYLVAALQITVLLFKKPNFRGEGTFLILLALIPCYVNISNIFEHGFMMDYFDDYEGFFKDLYAMFIL
IFLYVHTIKKEQKTRTEHEFQIKSDLKLKSKLLTEIHHRVNNNLQIISGLMALQIESENDEKLTTSLNLIQNRIKAIASV
HKLIYGSPNLLFVNLNQIFNSILSNLKITYLKEHAEIEFRELIEEGLEMDLDRAIPIGLILNELVSNCFRHAFKYGKQGF
IEVSMGRLNDEFVLIVRDNGIGMEIDPDGKGIGLMLVRNLVKQLRGNLVIGSNQGVSFEIRFPIINANPIQI
>Mature_312_residues
MNVIVILNVLSLLVYLVAALQITVLLFKKPNFRGEGTFLILLALIPCYVNISNIFEHGFMMDYFDDYEGFFKDLYAMFIL
IFLYVHTIKKEQKTRTEHEFQIKSDLKLKSKLLTEIHHRVNNNLQIISGLMALQIESENDEKLTTSLNLIQNRIKAIASV
HKLIYGSPNLLFVNLNQIFNSILSNLKITYLKEHAEIEFRELIEEGLEMDLDRAIPIGLILNELVSNCFRHAFKYGKQGF
IEVSMGRLNDEFVLIVRDNGIGMEIDPDGKGIGLMLVRNLVKQLRGNLVIGSNQGVSFEIRFPIINANPIQI

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 35746; Mature: 35746

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIVILNVLSLLVYLVAALQITVLLFKKPNFRGEGTFLILLALIPCYVNISNIFEHGFM
CCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCH
MDYFDDYEGFFKDLYAMFILIFLYVHTIKKEQKTRTEHEFQIKSDLKLKSKLLTEIHHRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHH
NNNLQIISGLMALQIESENDEKLTTSLNLIQNRIKAIASVHKLIYGSPNLLFVNLNQIFN
CCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
SILSNLKITYLKEHAEIEFRELIEEGLEMDLDRAIPIGLILNELVSNCFRHAFKYGKQGF
HHHHCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
IEVSMGRLNDEFVLIVRDNGIGMEIDPDGKGIGLMLVRNLVKQLRGNLVIGSNQGVSFEI
EEEEECCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEE
RFPIINANPIQI
EEEEECCCCCCC
>Mature Secondary Structure
MNVIVILNVLSLLVYLVAALQITVLLFKKPNFRGEGTFLILLALIPCYVNISNIFEHGFM
CCEEEHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCH
MDYFDDYEGFFKDLYAMFILIFLYVHTIKKEQKTRTEHEFQIKSDLKLKSKLLTEIHHRV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHH
NNNLQIISGLMALQIESENDEKLTTSLNLIQNRIKAIASVHKLIYGSPNLLFVNLNQIFN
CCCHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHH
SILSNLKITYLKEHAEIEFRELIEEGLEMDLDRAIPIGLILNELVSNCFRHAFKYGKQGF
HHHHCCEEEEEHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCE
IEVSMGRLNDEFVLIVRDNGIGMEIDPDGKGIGLMLVRNLVKQLRGNLVIGSNQGVSFEI
EEEEECCCCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCEEEEE
RFPIINANPIQI
EEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]