| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yheS [H]
Identifier: 183222089
GI number: 183222089
Start: 2823305
End: 2824801
Strand: Reverse
Name: yheS [H]
Synonym: LEPBI_I2731
Alternate gene names: 183222089
Gene position: 2824801-2823305 (Counterclockwise)
Preceding gene: 183222091
Following gene: 183222088
Centisome position: 78.47
GC content: 41.42
Gene sequence:
>1497_bases ATGATCAAAATATCTGGCTTAAACAAACAATTCAACGGCAATGTTTTATTCGATGACTTACAATTCAGTGTCAACCGTGG AGAAAGAGTGGGACTTGTGGGTCGTAATGGCCACGGAAAGTCTACTCTTGTTCAAATCATTTTAGGAAAAACAGAAGCTG ATTCTGGAAACATCACCATCCCGAAAGGTTACCGCATTGGCCACTTAGAACAACACTTAGTTTTTACGAAACCAACAGTT CTTGAAGAATGTGCCCTTGGTTTGCCTGAAGGGGATGAATACGAAACTTGGAAAGTGGAGCGGATTTTATTTGGACTTGG ATTTTCAGAAGGGGATATGGAAAGAAGCCCCAATGAATTTTCTGGTGGTTACCAAATTCGGATGAACTTGGCAAAACTCC TTGTGTCTGCTCCAGACATGCTCATCTTAGATGAACCAAACAACTATTTGGATATTGTCACCATACGTTGGTTAGAGGAG TTCCTTCGTGAATGGGAAGGGGAAATCATCCTCATCACACACGATAGAAGTTTTATGGACAGTGTTGTGACCCATACAGT CGCCATCCACCGTACCAAAGCCATCAAAGTACAAGGTGATACAGAAAAATTATACACCCAAATCAACCAGGCAGAAGAAA TTTACGAAAAAACGAGACTCAACGAAGCCAAAAAACGAAAACAAGAAGAAATGTTCATCGCCAAGTTCAAAGCCAAGGCT AGTTTTGCGAGCCGTACCCAATCCCGTGTGAAAAAATTAGAAAAACAAGGTGAGATGAAAGCTCTGGATTCCATCGAAGA TATGGAATTGTACTTTAACAGTGCCCCATTCTCCGCCAATCAAATGTTAAGCGTAGAAGATGTTTCTTTTTCCTATGATG GGAAGTCTCCTTTTTTGTTTGAAAATTTTTCTATCAGTGTCGGGCCAGAAGATCGGATTTGTATCATCGGAAAAAACGGA AAAGGAAAATCTACCCTTCTCAAACTCATTGCAGGGGAACTCTCACCTGTTTCTGGTGCCGTAAAAAAACACCCGATCTT AAAAGAAGGATACTTCGGACAAACAAACAAACTGAATATGACAGAAGGGAATACAGTCGTGCAGGAAATTATGAGTGCCG ATCCTAATTGTTCGGAAGGGAAAGCTCGTAATATTGCTGGTGGTTTGATGTTTTCAGAAGACCTTGCCTTAAAAAAAGTG AAGGTCCTTTCGGGGGGAGAAAAGAGCCGGGTATTACTTGGTAAAATTTTAGTGACCCCTTGCCACTTACTTTACTTAGA TGAACCGACAAACCACTTAGATATGCAGTCCTGCGACTCTCTGATTGAAGCCATCGATAATTTTGATGGATCTGTGATTA TGGTCACCCACAACGAAATGCACTTGCGTGCTGTGGCGACAAAACTAATTGTATTCGATGATGACCGAGTTTTTGTCTAT GATGGTGGTTATGACGACTTCCTCTCAGACATTGGCTGGAAGGATGAAACCGTTTGA
Upstream 100 bases:
>100_bases TAAAACCGTAAAAAACCCACAATTTTTCATTTCTTTCTACTCGTCCTTTCGGCTAGATTCTGCATCTTGGTTTTATACCT ACTCCCCCTTCGGAATTTAT
Downstream 100 bases:
>100_bases AACCAATCCTAACCGTAAAACAAGTTTCCAAGTCCTATGAAAATGGATTCCAAGCATTAAAAACTGTGAATTGGGTAGTG GCTGATGGGGAAATCCACGC
Product: ABC transporter ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MIKISGLNKQFNGNVLFDDLQFSVNRGERVGLVGRNGHGKSTLVQIILGKTEADSGNITIPKGYRIGHLEQHLVFTKPTV LEECALGLPEGDEYETWKVERILFGLGFSEGDMERSPNEFSGGYQIRMNLAKLLVSAPDMLILDEPNNYLDIVTIRWLEE FLREWEGEIILITHDRSFMDSVVTHTVAIHRTKAIKVQGDTEKLYTQINQAEEIYEKTRLNEAKKRKQEEMFIAKFKAKA SFASRTQSRVKKLEKQGEMKALDSIEDMELYFNSAPFSANQMLSVEDVSFSYDGKSPFLFENFSISVGPEDRICIIGKNG KGKSTLLKLIAGELSPVSGAVKKHPILKEGYFGQTNKLNMTEGNTVVQEIMSADPNCSEGKARNIAGGLMFSEDLALKKV KVLSGGEKSRVLLGKILVTPCHLLYLDEPTNHLDMQSCDSLIEAIDNFDGSVIMVTHNEMHLRAVATKLIVFDDDRVFVY DGGYDDFLSDIGWKDETV
Sequences:
>Translated_498_residues MIKISGLNKQFNGNVLFDDLQFSVNRGERVGLVGRNGHGKSTLVQIILGKTEADSGNITIPKGYRIGHLEQHLVFTKPTV LEECALGLPEGDEYETWKVERILFGLGFSEGDMERSPNEFSGGYQIRMNLAKLLVSAPDMLILDEPNNYLDIVTIRWLEE FLREWEGEIILITHDRSFMDSVVTHTVAIHRTKAIKVQGDTEKLYTQINQAEEIYEKTRLNEAKKRKQEEMFIAKFKAKA SFASRTQSRVKKLEKQGEMKALDSIEDMELYFNSAPFSANQMLSVEDVSFSYDGKSPFLFENFSISVGPEDRICIIGKNG KGKSTLLKLIAGELSPVSGAVKKHPILKEGYFGQTNKLNMTEGNTVVQEIMSADPNCSEGKARNIAGGLMFSEDLALKKV KVLSGGEKSRVLLGKILVTPCHLLYLDEPTNHLDMQSCDSLIEAIDNFDGSVIMVTHNEMHLRAVATKLIVFDDDRVFVY DGGYDDFLSDIGWKDETV >Mature_498_residues MIKISGLNKQFNGNVLFDDLQFSVNRGERVGLVGRNGHGKSTLVQIILGKTEADSGNITIPKGYRIGHLEQHLVFTKPTV LEECALGLPEGDEYETWKVERILFGLGFSEGDMERSPNEFSGGYQIRMNLAKLLVSAPDMLILDEPNNYLDIVTIRWLEE FLREWEGEIILITHDRSFMDSVVTHTVAIHRTKAIKVQGDTEKLYTQINQAEEIYEKTRLNEAKKRKQEEMFIAKFKAKA SFASRTQSRVKKLEKQGEMKALDSIEDMELYFNSAPFSANQMLSVEDVSFSYDGKSPFLFENFSISVGPEDRICIIGKNG KGKSTLLKLIAGELSPVSGAVKKHPILKEGYFGQTNKLNMTEGNTVVQEIMSADPNCSEGKARNIAGGLMFSEDLALKKV KVLSGGEKSRVLLGKILVTPCHLLYLDEPTNHLDMQSCDSLIEAIDNFDGSVIMVTHNEMHLRAVATKLIVFDDDRVFVY DGGYDDFLSDIGWKDETV
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=529, Percent_Identity=33.0812854442344, Blast_Score=281, Evalue=1e-75, Organism=Homo sapiens, GI10947137, Length=517, Percent_Identity=30.3675048355899, Blast_Score=215, Evalue=8e-56, Organism=Homo sapiens, GI27881506, Length=517, Percent_Identity=30.3675048355899, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=29.182156133829, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=29.182156133829, Blast_Score=189, Evalue=3e-48, Organism=Escherichia coli, GI1789751, Length=529, Percent_Identity=32.8922495274102, Blast_Score=288, Evalue=5e-79, Organism=Escherichia coli, GI1787041, Length=535, Percent_Identity=33.0841121495327, Blast_Score=263, Evalue=2e-71, Organism=Escherichia coli, GI1787182, Length=540, Percent_Identity=31.4814814814815, Blast_Score=221, Evalue=9e-59, Organism=Escherichia coli, GI2367384, Length=519, Percent_Identity=27.7456647398844, Blast_Score=181, Evalue=1e-46, Organism=Escherichia coli, GI48995001, Length=521, Percent_Identity=24.3761996161228, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87081791, Length=228, Percent_Identity=26.7543859649123, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=31.1881188118812, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1787370, Length=223, Percent_Identity=24.6636771300448, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788761, Length=210, Percent_Identity=28.0952380952381, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788225, Length=241, Percent_Identity=28.2157676348548, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786253, Length=230, Percent_Identity=30, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1787758, Length=204, Percent_Identity=27.9411764705882, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=25.1121076233184, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788450, Length=227, Percent_Identity=27.3127753303965, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1787500, Length=214, Percent_Identity=25.2336448598131, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=24.6511627906977, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787112, Length=231, Percent_Identity=27.7056277056277, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=29.4736842105263, Blast_Score=65, Evalue=7e-12, Organism=Escherichia coli, GI1787164, Length=186, Percent_Identity=27.4193548387097, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI87081834, Length=203, Percent_Identity=28.0788177339901, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17553372, Length=534, Percent_Identity=29.4007490636704, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=29.7989031078611, Blast_Score=223, Evalue=2e-58, Organism=Caenorhabditis elegans, GI17555318, Length=520, Percent_Identity=28.2692307692308, Blast_Score=218, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6321121, Length=533, Percent_Identity=30.3939962476548, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6320874, Length=519, Percent_Identity=28.5163776493256, Blast_Score=206, Evalue=9e-54, Organism=Saccharomyces cerevisiae, GI6325030, Length=349, Percent_Identity=28.6532951289398, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324314, Length=346, Percent_Identity=24.5664739884393, Blast_Score=109, Evalue=1e-24, Organism=Saccharomyces cerevisiae, GI6323278, Length=350, Percent_Identity=24.5714285714286, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6324985, Length=183, Percent_Identity=27.8688524590164, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI24666836, Length=533, Percent_Identity=33.3958724202627, Blast_Score=279, Evalue=4e-75, Organism=Drosophila melanogaster, GI24642252, Length=536, Percent_Identity=30.0373134328358, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI18859989, Length=536, Percent_Identity=30.0373134328358, Blast_Score=235, Evalue=7e-62, Organism=Drosophila melanogaster, GI24641342, Length=533, Percent_Identity=31.8949343339587, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI28574259, Length=178, Percent_Identity=29.7752808988764, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 55831; Mature: 55831
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKISGLNKQFNGNVLFDDLQFSVNRGERVGLVGRNGHGKSTLVQIILGKTEADSGNITI CEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHEEEEEECCCCCCCCCEEE PKGYRIGHLEQHLVFTKPTVLEECALGLPEGDEYETWKVERILFGLGFSEGDMERSPNEF CCCCEECCCHHCEEECCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC SGGYQIRMNLAKLLVSAPDMLILDEPNNYLDIVTIRWLEEFLREWEGEIILITHDRSFMD CCCEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHHHH SVVTHTVAIHRTKAIKVQGDTEKLYTQINQAEEIYEKTRLNEAKKRKQEEMFIAKFKAKA HHHHHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFASRTQSRVKKLEKQGEMKALDSIEDMELYFNSAPFSANQMLSVEDVSFSYDGKSPFLF HHHHHHHHHHHHHHHCCCHHHHCCHHHHHEEECCCCCCCCCEEEEEECEEEECCCCCEEE ENFSISVGPEDRICIIGKNGKGKSTLLKLIAGELSPVSGAVKKHPILKEGYFGQTNKLNM ECEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEC TEGNTVVQEIMSADPNCSEGKARNIAGGLMFSEDLALKKVKVLSGGEKSRVLLGKILVTP CCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEECCCCCCCEEEHHHHHCC CHLLYLDEPTNHLDMQSCDSLIEAIDNFDGSVIMVTHNEMHLRAVATKLIVFDDDRVFVY EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEEEEEEECCEEEEE DGGYDDFLSDIGWKDETV ECCHHHHHHHCCCCCCCC >Mature Secondary Structure MIKISGLNKQFNGNVLFDDLQFSVNRGERVGLVGRNGHGKSTLVQIILGKTEADSGNITI CEEECCCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCHHHEEEEEECCCCCCCCCEEE PKGYRIGHLEQHLVFTKPTVLEECALGLPEGDEYETWKVERILFGLGFSEGDMERSPNEF CCCCEECCCHHCEEECCCHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCC SGGYQIRMNLAKLLVSAPDMLILDEPNNYLDIVTIRWLEEFLREWEGEIILITHDRSFMD CCCEEEEEHHHHHHHCCCCEEEEECCCCEEEEEEHHHHHHHHHHHCCCEEEEECCHHHHH SVVTHTVAIHRTKAIKVQGDTEKLYTQINQAEEIYEKTRLNEAKKRKQEEMFIAKFKAKA HHHHHHHEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFASRTQSRVKKLEKQGEMKALDSIEDMELYFNSAPFSANQMLSVEDVSFSYDGKSPFLF HHHHHHHHHHHHHHHCCCHHHHCCHHHHHEEECCCCCCCCCEEEEEECEEEECCCCCEEE ENFSISVGPEDRICIIGKNGKGKSTLLKLIAGELSPVSGAVKKHPILKEGYFGQTNKLNM ECEEEEECCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCEEEC TEGNTVVQEIMSADPNCSEGKARNIAGGLMFSEDLALKKVKVLSGGEKSRVLLGKILVTP CCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCHHHHEEEEECCCCCCCEEEHHHHHCC CHLLYLDEPTNHLDMQSCDSLIEAIDNFDGSVIMVTHNEMHLRAVATKLIVFDDDRVFVY EEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEEEEEEEEECCEEEEE DGGYDDFLSDIGWKDETV ECCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]