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The map label for this gene is yjjU [H]

Identifier: 183222079

GI number: 183222079

Start: 2815619

End: 2816554

Strand: Reverse

Name: yjjU [H]

Synonym: LEPBI_I2721

Alternate gene names: 183222079

Gene position: 2816554-2815619 (Counterclockwise)

Preceding gene: 183222082

Following gene: 183222077

Centisome position: 78.24

GC content: 43.7

Gene sequence:

>936_bases
ATGAGTCAAAAACAGGTCGTTCCAAACCACCCACCCAAAATTCCAAAAGCAAAGGGAACCAAACGCGCCCTACTTGTGGA
AGGAGGCGGAATGAAAGGAGCCTTTTCAAGTGGGGTTTTGTACGCATGGAATCGGTTCTTACGGCCAAATTACTTTGATT
TGGTGGTGGGTGTTTCGTCTGGGGCTTGTGCTGCTGCCTATTATGTGTCGATGCCAAAGGAAGAACCGATCAAAAGTGAA
AAAGCTCTCGCCGTTTGGTACAGAGATTTATCTGGGAGAAAACTCATTTCGTTTTTCCATCCCTTCCAAGGGAAAACCCT
TCTCAACCAAGAATACCTCATTGATTTTATTTTTCGGAAAAAAGTCCGTTTGGAATCCGAAACCCTCGATTCCAAAAAAC
TCCCGCATTTTGTGATTGCTGTGAGTAATTTGCACACTCATTCCATTGAATACATCAAAGCCACATCTTCGAATATTTTT
GATTTATTAAAGGCGGCCACTTCCCTCCCCATCGCGACCCGCGGAAAACATATGTTAGATGGGATTTTGTATTCGGATGC
TGCCATCCTGAATCCACTTCCTATCCAAGATATCATTGAAGCTGGTTACAAAGAAATTGTAGTGATCATGAATTCACCCA
TTCGGCATATTTCAGGTCCACTCACAAGGCTCACTAGTTTTTTTGCCTTCCCGAAACACAGAACCATCCGGCGTATGATG
CGGAAGTTCCACCATTTTCATTTTAACTTAGGGCGTGAAATTGCAGTCAAACCACCAAAAGGTGTGAAGATCATCACGGT
CGCTCCCGATGAACCACTTCCAGTGAAACTCACAACCACCATCCGCACCAAATTGTACAAAACGGCCTTACTCGGTGTGA
AAAAAGGGGAGGAAGCGATCCAAAAGATTTTAAAACGGAAACTTAAATCCAGATAA

Upstream 100 bases:

>100_bases
TACAAATCAATTGCTTACGTAGCGAATTTTATTGTCCTCTTTCCAATTTTTTTGAATCCTTTTTGCAACGAAAACTAGGG
AGTGAGACTCTGACAGTGAG

Downstream 100 bases:

>100_bases
AAATGGAACCGAGTGAAACGTGATGCATCGTTTTTTCATTCATACAAGTTGGTTCGAACCAAACCACCGTTACTACGCCT
AAGTGCCACATTGAAGATTC

Product: putative hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSQKQVVPNHPPKIPKAKGTKRALLVEGGGMKGAFSSGVLYAWNRFLRPNYFDLVVGVSSGACAAAYYVSMPKEEPIKSE
KALAVWYRDLSGRKLISFFHPFQGKTLLNQEYLIDFIFRKKVRLESETLDSKKLPHFVIAVSNLHTHSIEYIKATSSNIF
DLLKAATSLPIATRGKHMLDGILYSDAAILNPLPIQDIIEAGYKEIVVIMNSPIRHISGPLTRLTSFFAFPKHRTIRRMM
RKFHHFHFNLGREIAVKPPKGVKIITVAPDEPLPVKLTTTIRTKLYKTALLGVKKGEEAIQKILKRKLKSR

Sequences:

>Translated_311_residues
MSQKQVVPNHPPKIPKAKGTKRALLVEGGGMKGAFSSGVLYAWNRFLRPNYFDLVVGVSSGACAAAYYVSMPKEEPIKSE
KALAVWYRDLSGRKLISFFHPFQGKTLLNQEYLIDFIFRKKVRLESETLDSKKLPHFVIAVSNLHTHSIEYIKATSSNIF
DLLKAATSLPIATRGKHMLDGILYSDAAILNPLPIQDIIEAGYKEIVVIMNSPIRHISGPLTRLTSFFAFPKHRTIRRMM
RKFHHFHFNLGREIAVKPPKGVKIITVAPDEPLPVKLTTTIRTKLYKTALLGVKKGEEAIQKILKRKLKSR
>Mature_310_residues
SQKQVVPNHPPKIPKAKGTKRALLVEGGGMKGAFSSGVLYAWNRFLRPNYFDLVVGVSSGACAAAYYVSMPKEEPIKSEK
ALAVWYRDLSGRKLISFFHPFQGKTLLNQEYLIDFIFRKKVRLESETLDSKKLPHFVIAVSNLHTHSIEYIKATSSNIFD
LLKAATSLPIATRGKHMLDGILYSDAAILNPLPIQDIIEAGYKEIVVIMNSPIRHISGPLTRLTSFFAFPKHRTIRRMMR
KFHHFHFNLGREIAVKPPKGVKIITVAPDEPLPVKLTTTIRTKLYKTALLGVKKGEEAIQKILKRKLKSR

Specific function: Probable lipid hydrolase [H]

COG id: COG4667

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Escherichia coli, GI1790837, Length=261, Percent_Identity=24.5210727969349, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 35085; Mature: 34954

Theoretical pI: Translated: 10.84; Mature: 10.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQKQVVPNHPPKIPKAKGTKRALLVEGGGMKGAFSSGVLYAWNRFLRPNYFDLVVGVSS
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHCCCCCEEEEEECCC
GACAAAYYVSMPKEEPIKSEKALAVWYRDLSGRKLISFFHPFQGKTLLNQEYLIDFIFRK
CCCHHHHEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEECCHHHHHHHHHHH
KVRLESETLDSKKLPHFVIAVSNLHTHSIEYIKATSSNIFDLLKAATSLPIATRGKHMLD
HHHHHHHHCCCCCCCEEEEEEECCCHHCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHH
GILYSDAAILNPLPIQDIIEAGYKEIVVIMNSPIRHISGPLTRLTSFFAFPKHRTIRRMM
HHHHCCHHHCCCCCHHHHHHCCHHEEEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHH
RKFHHFHFNLGREIAVKPPKGVKIITVAPDEPLPVKLTTTIRTKLYKTALLGVKKGEEAI
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHH
QKILKRKLKSR
HHHHHHHHHCC
>Mature Secondary Structure 
SQKQVVPNHPPKIPKAKGTKRALLVEGGGMKGAFSSGVLYAWNRFLRPNYFDLVVGVSS
CCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHCCHHHHHHHHCCCCCEEEEEECCC
GACAAAYYVSMPKEEPIKSEKALAVWYRDLSGRKLISFFHPFQGKTLLNQEYLIDFIFRK
CCCHHHHEEECCCCCCCCCCCEEEEEECCCCCCCHHHHHCCCCCCEECCHHHHHHHHHHH
KVRLESETLDSKKLPHFVIAVSNLHTHSIEYIKATSSNIFDLLKAATSLPIATRGKHMLD
HHHHHHHHCCCCCCCEEEEEEECCCHHCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHH
GILYSDAAILNPLPIQDIIEAGYKEIVVIMNSPIRHISGPLTRLTSFFAFPKHRTIRRMM
HHHHCCHHHCCCCCHHHHHHCCHHEEEEEECCCHHHHCCHHHHHHHHHHCCCHHHHHHHH
RKFHHFHFNLGREIAVKPPKGVKIITVAPDEPLPVKLTTTIRTKLYKTALLGVKKGEEAI
HHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHH
QKILKRKLKSR
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]