| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221933
Identifier: 183221933
GI number: 183221933
Start: 2659367
End: 2660146
Strand: Reverse
Name: 183221933
Synonym: LEPBI_I2572
Alternate gene names: NA
Gene position: 2660146-2659367 (Counterclockwise)
Preceding gene: 183221934
Following gene: 183221932
Centisome position: 73.9
GC content: 36.79
Gene sequence:
>780_bases ATGAAACATTTGATTCACATCACTGCTGTTATCTGTCTACTTGTATCTTCTTTGTATGCGCAAGAGAAAGAACAAGTTGG TTCTGCTTATTTCCAAGCGGTTGATGAATACAAAACTAAAAATTATGCTAAATCAATTGAACTTGTAAAAAGTTTACTTG TCGATGGAAAATCCTCTTACGAATTTTACGCCCTACTTGCTTTCAATTATGATAAATTAAACGATTTTGAAAATGCTTAC AAAAACATGTTGGAAGCTAGGAAACGAAAACCAGATGATGAGGACTTATTACAAGGAAGCCTTGCGATATTAACTCGTCA TAAAAAATGGAAACCTGCAATTGAACTGGCTGAAAAAGCCATTCCCCTTTACCCACAAAATCCAGAAATTCGATATTTTT ATGCCTTGGCCCTTTCCGAAAAAGGTGCTTCCAAAACAGCCCTTTCCCAAATCGAAAAAGCAAAGGCAGGCAGTCCGAGT GACGTCCGTATGCTTGAGTTAGAAGGGAAAATTTATTACCAACTGAAAAATTATGACAAAGCTGATATGAGCCTTCGTTG GGCATCTAGTATCAACCAAAACTCATCTGAGATTTGGAATAACCTAGCCCTCGTTCAAGAAGCTCTTTACAAATCGAATA AAAAGTTAGGGAAAAAAAATCAGGCGAATACCTACTTAGAAGAAGCAAAATCCTGCATTGAAAAAGCATCCTCACTCAAT GGTGAAAGTAATACCATCAAAGAAAATTCAAAAAGGATTTCTGCTCTCACTGCCCTGTGA
Upstream 100 bases:
>100_bases AAGGGGGAAGCGTTTTCCTATACCTGGACCCTATTGAGCCATACCATTCTAGGATCGATACGGTCAATTTGAACTCCATT ACGGTTTCCTCGGATTTATT
Downstream 100 bases:
>100_bases AAATTAAGTTCCACACACTTGGTTGTCGCTTAAACTTTTTTGAGACAGATGGTATGTATACTGTTCTCAAAGACAAAGGG TTTACTTTGGCAACACCAGA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKHLIHITAVICLLVSSLYAQEKEQVGSAYFQAVDEYKTKNYAKSIELVKSLLVDGKSSYEFYALLAFNYDKLNDFENAY KNMLEARKRKPDDEDLLQGSLAILTRHKKWKPAIELAEKAIPLYPQNPEIRYFYALALSEKGASKTALSQIEKAKAGSPS DVRMLELEGKIYYQLKNYDKADMSLRWASSINQNSSEIWNNLALVQEALYKSNKKLGKKNQANTYLEEAKSCIEKASSLN GESNTIKENSKRISALTAL
Sequences:
>Translated_259_residues MKHLIHITAVICLLVSSLYAQEKEQVGSAYFQAVDEYKTKNYAKSIELVKSLLVDGKSSYEFYALLAFNYDKLNDFENAY KNMLEARKRKPDDEDLLQGSLAILTRHKKWKPAIELAEKAIPLYPQNPEIRYFYALALSEKGASKTALSQIEKAKAGSPS DVRMLELEGKIYYQLKNYDKADMSLRWASSINQNSSEIWNNLALVQEALYKSNKKLGKKNQANTYLEEAKSCIEKASSLN GESNTIKENSKRISALTAL >Mature_259_residues MKHLIHITAVICLLVSSLYAQEKEQVGSAYFQAVDEYKTKNYAKSIELVKSLLVDGKSSYEFYALLAFNYDKLNDFENAY KNMLEARKRKPDDEDLLQGSLAILTRHKKWKPAIELAEKAIPLYPQNPEIRYFYALALSEKGASKTALSQIEKAKAGSPS DVRMLELEGKIYYQLKNYDKADMSLRWASSINQNSSEIWNNLALVQEALYKSNKKLGKKNQANTYLEEAKSCIEKASSLN GESNTIKENSKRISALTAL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29371; Mature: 29371
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLIHITAVICLLVSSLYAQEKEQVGSAYFQAVDEYKTKNYAKSIELVKSLLVDGKSSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFYALLAFNYDKLNDFENAYKNMLEARKRKPDDEDLLQGSLAILTRHKKWKPAIELAEKA EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHC IPLYPQNPEIRYFYALALSEKGASKTALSQIEKAKAGSPSDVRMLELEGKIYYQLKNYDK CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCC ADMSLRWASSINQNSSEIWNNLALVQEALYKSNKKLGKKNQANTYLEEAKSCIEKASSLN HHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GESNTIKENSKRISALTAL CCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MKHLIHITAVICLLVSSLYAQEKEQVGSAYFQAVDEYKTKNYAKSIELVKSLLVDGKSSY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC EFYALLAFNYDKLNDFENAYKNMLEARKRKPDDEDLLQGSLAILTRHKKWKPAIELAEKA EEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHC IPLYPQNPEIRYFYALALSEKGASKTALSQIEKAKAGSPSDVRMLELEGKIYYQLKNYDK CCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEECCEEEEEECCCCC ADMSLRWASSINQNSSEIWNNLALVQEALYKSNKKLGKKNQANTYLEEAKSCIEKASSLN HHHEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GESNTIKENSKRISALTAL CCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA