| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221879
Identifier: 183221879
GI number: 183221879
Start: 2597076
End: 2598089
Strand: Reverse
Name: 183221879
Synonym: LEPBI_I2514
Alternate gene names: NA
Gene position: 2598089-2597076 (Counterclockwise)
Preceding gene: 183221880
Following gene: 183221874
Centisome position: 72.18
GC content: 38.36
Gene sequence:
>1014_bases ATGTTTAAGGCAATGGATCACGTTAGCCGTTCGTTCCCCTTTCAAAAAAATAAAAGTTTGGAACATATGTTTTATTTAAC ATTTTTCTACCTTATTCTATTTGTTTCGTTATTGTTTCTCAATTGTGCAAAAGAAGAACAAAAATCAAAGCAAACCAATA CCCTTGGTTTATTGGGTTTGGCATCTGGAAATCAAAACTCATCAAATTCAGACACAGGTCAGCCAGAGGGAGGATTGTTA CCTCCGATCCCACCCGTTGTGGGTCCACCTGCCAATCCTGGCCAACCTCTGAATGCTCCGATCCTAAATGACCCTCAAAC ACAAGTGAACAATGCACCACAAGCTGAAGACCAATATGGACTTTATGGTAAAATTCTAATTGATCAAATTAGTTTCCAAC TACCAGTCCATGACCAAACAACGATTACAGCCTATATTGGGAAGCGAAATTTGAGATTGGAACCTGACGGAACTGTTGTG AATGCAACAGATTTTAGAACCTTCACTCCTGCCAATCCAAATCAGGGAGGAACTGTTTGGTTTAGTTTTATCCACCGTTC CAATCAAAAACAAAAACTAATTCTAGTAGCAAGGAATGAATTTGGTTCGTCTTCGAAAGAAATCGATTTTAGTCACATCC GGGACTGCGGTGGAGTGGCTCTTGCTCCCACTACTTATGGTAATTGCAACGATCATTGTATTGAAGTTACGAAAGTAGCC GGACAATGGAATTTTACAACAAAATACAAACATGGTCCAGGTGTCACTTTTGCTAATATATCTCTCTCAGGAGTTTCACA TACCGCATATCCATTTGGCTACGATGAATTCCTTTATCTATGGGATCCAGCGAATGGACTTCCATTGCCTGACGGAATTT TTTCGTTTTCATCAACGCTAAATCCTATAGTGAATGAATATTCTTGTATATTATTAAGAAGTGATGTATTCATCGAAGAC GAAAATGGCAATTTTCATATTTTTTATTTAGAAAAAAGCGCTCGGTTCGAATAA
Upstream 100 bases:
>100_bases CTGATTCCCGTCCCAGGAAGACAGAAACTCCAAAACAGATTAGAATCATTCAGATTCGATGGTAAATCGAATTCTATCAT GTTGTTCAGGAGACTCACTC
Downstream 100 bases:
>100_bases TCGGGATTAAAGCATCGGAATTCAATACTAAAGGAGTAAAACTCCAATGGTGTTTTTTCCGATGTCGACTTGGAATCTTT TTATAAAGAAAAATATCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MFKAMDHVSRSFPFQKNKSLEHMFYLTFFYLILFVSLLFLNCAKEEQKSKQTNTLGLLGLASGNQNSSNSDTGQPEGGLL PPIPPVVGPPANPGQPLNAPILNDPQTQVNNAPQAEDQYGLYGKILIDQISFQLPVHDQTTITAYIGKRNLRLEPDGTVV NATDFRTFTPANPNQGGTVWFSFIHRSNQKQKLILVARNEFGSSSKEIDFSHIRDCGGVALAPTTYGNCNDHCIEVTKVA GQWNFTTKYKHGPGVTFANISLSGVSHTAYPFGYDEFLYLWDPANGLPLPDGIFSFSSTLNPIVNEYSCILLRSDVFIED ENGNFHIFYLEKSARFE
Sequences:
>Translated_337_residues MFKAMDHVSRSFPFQKNKSLEHMFYLTFFYLILFVSLLFLNCAKEEQKSKQTNTLGLLGLASGNQNSSNSDTGQPEGGLL PPIPPVVGPPANPGQPLNAPILNDPQTQVNNAPQAEDQYGLYGKILIDQISFQLPVHDQTTITAYIGKRNLRLEPDGTVV NATDFRTFTPANPNQGGTVWFSFIHRSNQKQKLILVARNEFGSSSKEIDFSHIRDCGGVALAPTTYGNCNDHCIEVTKVA GQWNFTTKYKHGPGVTFANISLSGVSHTAYPFGYDEFLYLWDPANGLPLPDGIFSFSSTLNPIVNEYSCILLRSDVFIED ENGNFHIFYLEKSARFE >Mature_337_residues MFKAMDHVSRSFPFQKNKSLEHMFYLTFFYLILFVSLLFLNCAKEEQKSKQTNTLGLLGLASGNQNSSNSDTGQPEGGLL PPIPPVVGPPANPGQPLNAPILNDPQTQVNNAPQAEDQYGLYGKILIDQISFQLPVHDQTTITAYIGKRNLRLEPDGTVV NATDFRTFTPANPNQGGTVWFSFIHRSNQKQKLILVARNEFGSSSKEIDFSHIRDCGGVALAPTTYGNCNDHCIEVTKVA GQWNFTTKYKHGPGVTFANISLSGVSHTAYPFGYDEFLYLWDPANGLPLPDGIFSFSSTLNPIVNEYSCILLRSDVFIED ENGNFHIFYLEKSARFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37460; Mature: 37460
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKAMDHVSRSFPFQKNKSLEHMFYLTFFYLILFVSLLFLNCAKEEQKSKQTNTLGLLGL CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE ASGNQNSSNSDTGQPEGGLLPPIPPVVGPPANPGQPLNAPILNDPQTQVNNAPQAEDQYG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC LYGKILIDQISFQLPVHDQTTITAYIGKRNLRLEPDGTVVNATDFRTFTPANPNQGGTVW CEEEEEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCEEECCCCEEECCCCCCCCCEEE FSFIHRSNQKQKLILVARNEFGSSSKEIDFSHIRDCGGVALAPTTYGNCNDHCIEVTKVA EEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEEEC GQWNFTTKYKHGPGVTFANISLSGVSHTAYPFGYDEFLYLWDPANGLPLPDGIFSFSSTL CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH NPIVNEYSCILLRSDVFIEDENGNFHIFYLEKSARFE HHHHCCEEEEEEECCEEEECCCCCEEEEEEECCCCCC >Mature Secondary Structure MFKAMDHVSRSFPFQKNKSLEHMFYLTFFYLILFVSLLFLNCAKEEQKSKQTNTLGLLGL CCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE ASGNQNSSNSDTGQPEGGLLPPIPPVVGPPANPGQPLNAPILNDPQTQVNNAPQAEDQYG ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCC LYGKILIDQISFQLPVHDQTTITAYIGKRNLRLEPDGTVVNATDFRTFTPANPNQGGTVW CEEEEEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCEEECCCCEEECCCCCCCCCEEE FSFIHRSNQKQKLILVARNEFGSSSKEIDFSHIRDCGGVALAPTTYGNCNDHCIEVTKVA EEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCEEEEEEEC GQWNFTTKYKHGPGVTFANISLSGVSHTAYPFGYDEFLYLWDPANGLPLPDGIFSFSSTL CCCCEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHH NPIVNEYSCILLRSDVFIEDENGNFHIFYLEKSARFE HHHHCCEEEEEEECCEEEECCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA