| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221867
Identifier: 183221867
GI number: 183221867
Start: 2586304
End: 2586804
Strand: Reverse
Name: 183221867
Synonym: LEPBI_I2501
Alternate gene names: NA
Gene position: 2586804-2586304 (Counterclockwise)
Preceding gene: 183221869
Following gene: 183221866
Centisome position: 71.86
GC content: 37.13
Gene sequence:
>501_bases ATGAAGGGATTTGTATATCTTACATGGTTTATGATTGGGAGTAGTTTGTTTTTTTTCGCCTGTTCATCACCATCCACCCA AGTGGCAGAAAACCTATCCTCTGAAACCGAACTGGTCACCAAACGTAACTGGAGTATGAACCCTAAGTGTTGTGAATTGA AAGCTGAGTTTTTAGGAGTGGTTGTTCTTGACCAAATTTGTATCACAGACTCAGAAACCAAATTGAAACTACACACGAAG GATTGGAAACGAGTTTGTGTGTTAAAAGAAGGTATGGTCTTCCGAGATGATTTAGGCACTCATTATTCATTTTTAAAATC AGATGGTGTGGATCTTTGCCCAAAAAGAACCAAAATGAAAGACACTTCCTTCTATTTGAGTTTTGAGTCTATGTCAAACC TTGCTACATCGTTTGATTTGATAGAAGACAAAAATGCAAAACATGCACACAAACCTTGGGTGTTTGAAAAAGTGGATCTT ATGAATTGTCAATGGAAATGA
Upstream 100 bases:
>100_bases CAAAATCTGATGTTGAAAGAAAATATTTTTTAAAAAAAGATAGAATTTTGGGTTTTCGTATGGGGTAATCGTATGAAATT TCAATGGGATTGGTGATTGT
Downstream 100 bases:
>100_bases ATGTCTTAGATTCCAACGGAAACGACCTGAGTTTTAAACATGATTTTATAAACAAATTGCACAAACATTAGGCACGTTAT GCGAAGCATTGGAATATCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MKGFVYLTWFMIGSSLFFFACSSPSTQVAENLSSETELVTKRNWSMNPKCCELKAEFLGVVVLDQICITDSETKLKLHTK DWKRVCVLKEGMVFRDDLGTHYSFLKSDGVDLCPKRTKMKDTSFYLSFESMSNLATSFDLIEDKNAKHAHKPWVFEKVDL MNCQWK
Sequences:
>Translated_166_residues MKGFVYLTWFMIGSSLFFFACSSPSTQVAENLSSETELVTKRNWSMNPKCCELKAEFLGVVVLDQICITDSETKLKLHTK DWKRVCVLKEGMVFRDDLGTHYSFLKSDGVDLCPKRTKMKDTSFYLSFESMSNLATSFDLIEDKNAKHAHKPWVFEKVDL MNCQWK >Mature_166_residues MKGFVYLTWFMIGSSLFFFACSSPSTQVAENLSSETELVTKRNWSMNPKCCELKAEFLGVVVLDQICITDSETKLKLHTK DWKRVCVLKEGMVFRDDLGTHYSFLKSDGVDLCPKRTKMKDTSFYLSFESMSNLATSFDLIEDKNAKHAHKPWVFEKVDL MNCQWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19180; Mature: 19180
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.4 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGFVYLTWFMIGSSLFFFACSSPSTQVAENLSSETELVTKRNWSMNPKCCELKAEFLGV CCCEEEEHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHH VVLDQICITDSETKLKLHTKDWKRVCVLKEGMVFRDDLGTHYSFLKSDGVDLCPKRTKMK HHHHHHHCCCCCCEEEEECCCHHEEEEHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCC DTSFYLSFESMSNLATSFDLIEDKNAKHAHKPWVFEKVDLMNCQWK CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC >Mature Secondary Structure MKGFVYLTWFMIGSSLFFFACSSPSTQVAENLSSETELVTKRNWSMNPKCCELKAEFLGV CCCEEEEHHHHHCCCEEEEEECCCCHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHH VVLDQICITDSETKLKLHTKDWKRVCVLKEGMVFRDDLGTHYSFLKSDGVDLCPKRTKMK HHHHHHHCCCCCCEEEEECCCHHEEEEHHCCEEEECCCCCHHHHHHCCCCCCCCCCCCCC DTSFYLSFESMSNLATSFDLIEDKNAKHAHKPWVFEKVDLMNCQWK CCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA