| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221847
Identifier: 183221847
GI number: 183221847
Start: 2560732
End: 2561109
Strand: Reverse
Name: 183221847
Synonym: LEPBI_I2479
Alternate gene names: NA
Gene position: 2561109-2560732 (Counterclockwise)
Preceding gene: 183221848
Following gene: 183221846
Centisome position: 71.15
GC content: 35.71
Gene sequence:
>378_bases TTGACGGATTCAAATTTTTCACTGATTCTTGATTCCCTGAGGTATTGTATGAAAACAATTTTGAAGTTGGTTTTGGGAGC ATGTTTGCTCCTTTCTTTCTCCGTATTTGCTCATGATAAAGATGGTCATGGGAAAAAGTTAATGGCAGTTGACAATTTTC AAAAAATGGATGCTGACAGTGATAAAAAAGTATCAAAAGAAGAATGGCTCAAATTCCACGATACGATGTTCGCAGATATG GACAAAGACGGTGATGGGATGATTTCTTTGGAAGAGTTGAAAGGAAAACAAATGGAAAAAAGAGACAAAATGAAAGAAAA AGCCAAGGAAAACCAAAAACAAGGAAAGAAGAAAAACCAAACGACAACTACGGAGTGA
Upstream 100 bases:
>100_bases GTCCTATGTTGTGGACAGTGCGGCAACGGCCCAATCTAGCCTTTATCGCATCCAACATTTTGGAAAAGGATAAAGATTTC ATCTCTGATCATAAGAGGGA
Downstream 100 bases:
>100_bases TTTCGTTCCTTACGATTTTTGATCTCATTCACTCCGAATTGAATCCAGAGTGGTGAAAGGTCCAATGGTTCTCCTAAGGA TTACAATCCGAAAGGGGAAC
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 124
Protein sequence:
>125_residues MTDSNFSLILDSLRYCMKTILKLVLGACLLLSFSVFAHDKDGHGKKLMAVDNFQKMDADSDKKVSKEEWLKFHDTMFADM DKDGDGMISLEELKGKQMEKRDKMKEKAKENQKQGKKKNQTTTTE
Sequences:
>Translated_125_residues MTDSNFSLILDSLRYCMKTILKLVLGACLLLSFSVFAHDKDGHGKKLMAVDNFQKMDADSDKKVSKEEWLKFHDTMFADM DKDGDGMISLEELKGKQMEKRDKMKEKAKENQKQGKKKNQTTTTE >Mature_124_residues TDSNFSLILDSLRYCMKTILKLVLGACLLLSFSVFAHDKDGHGKKLMAVDNFQKMDADSDKKVSKEEWLKFHDTMFADMD KDGDGMISLEELKGKQMEKRDKMKEKAKENQKQGKKKNQTTTTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14360; Mature: 14229
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00018 EF_HAND_1 ; PS50222 EF_HAND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 7.2 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSNFSLILDSLRYCMKTILKLVLGACLLLSFSVFAHDKDGHGKKLMAVDNFQKMDADS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCC DKKVSKEEWLKFHDTMFADMDKDGDGMISLEELKGKQMEKRDKMKEKAKENQKQGKKKNQ CCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC TTTTE CCCCC >Mature Secondary Structure TDSNFSLILDSLRYCMKTILKLVLGACLLLSFSVFAHDKDGHGKKLMAVDNFQKMDADS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCC DKKVSKEEWLKFHDTMFADMDKDGDGMISLEELKGKQMEKRDKMKEKAKENQKQGKKKNQ CCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCC TTTTE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA