Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221807
Identifier: 183221807
GI number: 183221807
Start: 2511985
End: 2512635
Strand: Reverse
Name: 183221807
Synonym: LEPBI_I2438
Alternate gene names: NA
Gene position: 2512635-2511985 (Counterclockwise)
Preceding gene: 183221808
Following gene: 183221806
Centisome position: 69.8
GC content: 39.02
Gene sequence:
>651_bases ATGGATTTAAACTCAAAAACTGAATCTGGAAATCGGCAATGGATGCGTCCATTGGTAGGTGTCCTACTGATGTTACTTCC TATTTTATTCTTTTATCTCAATGGAGTCGGCGCGACCATCCTTTGTTCCAAAAACCATTGCCAATTGGATCGTAAAAGTT TTCTCGGTGGATCCCATGATGAATTTTTCATATCGGAGATTCTTCGGATCGGATACAATTCGGAAGGTGCTTCCCAAATT CGAACCGGACCAAGTTCCTATGGTGATTCTGGCTCGGATTTAGAAATCCATTTGAATGATGGATCTAGTCTTCGGGTCTT TGGAACACCTGTCGGGTATTCATTTGGCAATTTGGAGTTTCGTAGTTTGGATTCTCTTAGAACCAATCCGATCGATCAGG AGATCCATCTAGAAAGTTATAGTTATGGCGGTAAACTATTGTTCATCGGTCCTACAATGGGTTTTATTGGTTATATTTTG ATACTCATCGGATTGGTTCGCCCTGTGACACCGGACTTGCAACCGAAGCAACTCCAAAAAAATCGAATTTATAATCTTAC TTTATTCTCTTTCACATTAACAATTGTCATCTTTTCGTATTATATCCTTTGGAATTTAGGCAAATCCTACTTACTCAGCC ATTTTTTTTAA
Upstream 100 bases:
>100_bases TGGATCTTCGAAGGACATCGGTAAAAAAATCTCTGATTTATAAATTTTTCATTCGATTCTCATTTTAAATAATGGTATCA TTTGTATCCCCGAGGATCTG
Downstream 100 bases:
>100_bases AAATGTTTTACCTTTTTTGAGAATGTGATTCCTTTGAACTGTTGAAAAGGATACCAACACATTCGGAAAATCATATGAAA AAAATCTTACTCTTAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MDLNSKTESGNRQWMRPLVGVLLMLLPILFFYLNGVGATILCSKNHCQLDRKSFLGGSHDEFFISEILRIGYNSEGASQI RTGPSSYGDSGSDLEIHLNDGSSLRVFGTPVGYSFGNLEFRSLDSLRTNPIDQEIHLESYSYGGKLLFIGPTMGFIGYIL ILIGLVRPVTPDLQPKQLQKNRIYNLTLFSFTLTIVIFSYYILWNLGKSYLLSHFF
Sequences:
>Translated_216_residues MDLNSKTESGNRQWMRPLVGVLLMLLPILFFYLNGVGATILCSKNHCQLDRKSFLGGSHDEFFISEILRIGYNSEGASQI RTGPSSYGDSGSDLEIHLNDGSSLRVFGTPVGYSFGNLEFRSLDSLRTNPIDQEIHLESYSYGGKLLFIGPTMGFIGYIL ILIGLVRPVTPDLQPKQLQKNRIYNLTLFSFTLTIVIFSYYILWNLGKSYLLSHFF >Mature_216_residues MDLNSKTESGNRQWMRPLVGVLLMLLPILFFYLNGVGATILCSKNHCQLDRKSFLGGSHDEFFISEILRIGYNSEGASQI RTGPSSYGDSGSDLEIHLNDGSSLRVFGTPVGYSFGNLEFRSLDSLRTNPIDQEIHLESYSYGGKLLFIGPTMGFIGYIL ILIGLVRPVTPDLQPKQLQKNRIYNLTLFSFTLTIVIFSYYILWNLGKSYLLSHFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24339; Mature: 24339
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLNSKTESGNRQWMRPLVGVLLMLLPILFFYLNGVGATILCSKNHCQLDRKSFLGGSHD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCC EFFISEILRIGYNSEGASQIRTGPSSYGDSGSDLEIHLNDGSSLRVFGTPVGYSFGNLEF HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEH RSLDSLRTNPIDQEIHLESYSYGGKLLFIGPTMGFIGYILILIGLVRPVTPDLQPKQLQK HHHHHHCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH NRIYNLTLFSFTLTIVIFSYYILWNLGKSYLLSHFF CCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure MDLNSKTESGNRQWMRPLVGVLLMLLPILFFYLNGVGATILCSKNHCQLDRKSFLGGSHD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCCCCC EFFISEILRIGYNSEGASQIRTGPSSYGDSGSDLEIHLNDGSSLRVFGTPVGYSFGNLEF HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCCCCEEH RSLDSLRTNPIDQEIHLESYSYGGKLLFIGPTMGFIGYILILIGLVRPVTPDLQPKQLQK HHHHHHCCCCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH NRIYNLTLFSFTLTIVIFSYYILWNLGKSYLLSHFF CCCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA