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The map label for this gene is scpA [H]

Identifier: 183221759

GI number: 183221759

Start: 2460716

End: 2461459

Strand: Reverse

Name: scpA [H]

Synonym: LEPBI_I2389

Alternate gene names: 183221759

Gene position: 2461459-2460716 (Counterclockwise)

Preceding gene: 183221760

Following gene: 183221758

Centisome position: 68.38

GC content: 41.26

Gene sequence:

>744_bases
GTGTCCCAAACGCCGGAGTTCATCGTCCGGTGGCAAAATCAGGACGGTGGATTGACTGAAGGACCTTTAACGGTTTTATG
GTCTCTGATTGATAGTTATAAGGTTGATATTTTTGAAGTCTCCCTTTCGCGTATCACATCCGATTTCATTCAATTTTTGA
GAACAAGTCAATCCTTGTCCATCGAGCTTACCTCTGAGTTTGCTGTGATGGCCGCCCATTTGGTGTATTTAAAATCGAAG
GCACTTCTCCCTGACCCAGGTTTTGAAGAAGAAGACTATGAGCCACCTCTCCCGAAAGAACTTGTGGATAAACTATTGGA
ACATAAAAAATTCCAAATGGCAGGCCAACGTTTGGCAGAACTGGACAGATTGACCGCCGGGATGTTTACCAGGGAAACCA
ACCAAGTTTTAGATGAAACGGAAGTTTGGCTTGATGTCAGTCTTGTGGACTTGATTTCTGCCTTTAATTCTATTTTGGAA
CAGGAAAGTTCCAATGAGGAAGAGGAACAAATCCCAATTTACGAAGGGGTTTCCCAGTATTCCGTAGAAGATAAAATGGC
TTACCTCCAGAATTTATTAGAAAAAACGGGCGAAATTCATTTTATGGATTTGTTTGAAAATGACAAACCAGAAAAAAAAG
AAATCGTCGCAGCCTTCCTTGCTGTATTAGAAGTTGTTAAAATCCGGGTTTGCAAAGTGATCCAACACGCAGTTTTCGGA
GAAATCAAAATAGTCAAGGTTTAG

Upstream 100 bases:

>100_bases
AGCTAAGGCAATCAAAATGGGTGTAAAGGATTTTGTTGTGAAACCATTTCCTCCGGAAAGATTGCAACAAGCAGCTGCTA
AAGCACTAGGTTTATAAATC

Downstream 100 bases:

>100_bases
ATCAATTTGGAAGAAAGAAACTATACAAAGGGCCTTCTTGAGGCACTTCTCTTTTTGTCTTCAGATCCAATCAAATTATC
TGCTCTTGCGAAGTCTTGTG

Product: chromosome segregation and condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSQTPEFIVRWQNQDGGLTEGPLTVLWSLIDSYKVDIFEVSLSRITSDFIQFLRTSQSLSIELTSEFAVMAAHLVYLKSK
ALLPDPGFEEEDYEPPLPKELVDKLLEHKKFQMAGQRLAELDRLTAGMFTRETNQVLDETEVWLDVSLVDLISAFNSILE
QESSNEEEEQIPIYEGVSQYSVEDKMAYLQNLLEKTGEIHFMDLFENDKPEKKEIVAAFLAVLEVVKIRVCKVIQHAVFG
EIKIVKV

Sequences:

>Translated_247_residues
MSQTPEFIVRWQNQDGGLTEGPLTVLWSLIDSYKVDIFEVSLSRITSDFIQFLRTSQSLSIELTSEFAVMAAHLVYLKSK
ALLPDPGFEEEDYEPPLPKELVDKLLEHKKFQMAGQRLAELDRLTAGMFTRETNQVLDETEVWLDVSLVDLISAFNSILE
QESSNEEEEQIPIYEGVSQYSVEDKMAYLQNLLEKTGEIHFMDLFENDKPEKKEIVAAFLAVLEVVKIRVCKVIQHAVFG
EIKIVKV
>Mature_246_residues
SQTPEFIVRWQNQDGGLTEGPLTVLWSLIDSYKVDIFEVSLSRITSDFIQFLRTSQSLSIELTSEFAVMAAHLVYLKSKA
LLPDPGFEEEDYEPPLPKELVDKLLEHKKFQMAGQRLAELDRLTAGMFTRETNQVLDETEVWLDVSLVDLISAFNSILEQ
ESSNEEEEQIPIYEGVSQYSVEDKMAYLQNLLEKTGEIHFMDLFENDKPEKKEIVAAFLAVLEVVKIRVCKVIQHAVFGE
IKIVKV

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 28265; Mature: 28133

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQTPEFIVRWQNQDGGLTEGPLTVLWSLIDSYKVDIFEVSLSRITSDFIQFLRTSQSLS
CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IELTSEFAVMAAHLVYLKSKALLPDPGFEEEDYEPPLPKELVDKLLEHKKFQMAGQRLAE
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDRLTAGMFTRETNQVLDETEVWLDVSLVDLISAFNSILEQESSNEEEEQIPIYEGVSQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCHHHH
SVEDKMAYLQNLLEKTGEIHFMDLFENDKPEKKEIVAAFLAVLEVVKIRVCKVIQHAVFG
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EIKIVKV
CEEEEEC
>Mature Secondary Structure 
SQTPEFIVRWQNQDGGLTEGPLTVLWSLIDSYKVDIFEVSLSRITSDFIQFLRTSQSLS
CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
IELTSEFAVMAAHLVYLKSKALLPDPGFEEEDYEPPLPKELVDKLLEHKKFQMAGQRLAE
EEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LDRLTAGMFTRETNQVLDETEVWLDVSLVDLISAFNSILEQESSNEEEEQIPIYEGVSQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCHHHH
SVEDKMAYLQNLLEKTGEIHFMDLFENDKPEKKEIVAAFLAVLEVVKIRVCKVIQHAVFG
HHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EIKIVKV
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA