| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221746
Identifier: 183221746
GI number: 183221746
Start: 2446711
End: 2447880
Strand: Reverse
Name: 183221746
Synonym: LEPBI_I2375
Alternate gene names: NA
Gene position: 2447880-2446711 (Counterclockwise)
Preceding gene: 183221747
Following gene: 183221744
Centisome position: 68.0
GC content: 34.96
Gene sequence:
>1170_bases ATGAGTCGAGTGATCGTTTCCTTAGCAGGTTTGTTATTCATTGTAGCTGGCCTATCCACTGCCTATTACCAAACCAATAT TTCTGCGAAAGAAGACCAATCTCAATTGGTTTTGGAAAGAATTGCAGAAGGAGAAGAGTATTTAAAACAAACCAACTCAC ATAGCAAAGAAAAGGCGATTGCTATTTTTTCTGAGTTAGCGGGAAAACGTGGTTTGGAAAAATTCGAGTTTCAAATCAAA TACAACCAAGCAAGAGCACTTGAAAAAAATTCAGATTTTTACCCTGCACTTGATATATACAAAGATCTTAAAAAAAACTC AAATTGGAAACCGGAAGAAAAAGATAAACTCAGTTATTCTCTTGGAAATTTACTCTTAAAAATTGGAAATGAATCCGAAG GGAAAGCGCACTTAGAGTCTGTATTACAATCCAGTTCCGATAATAAACTTAGATCAAAGTCATTTATGGCTTTAGGTGAT CATTATTATAAAATCGCTCAGTATGAAACTGCCCGTAAGAATTATGTATTGGCCTTACAAGAAGATCCAAACCATACAGA ATCTCGAATTGGTTGGGGAAGGACATTACGTAAGTTAGGAAAAGATTGGGCTTCATTTGATGTTTTTGATGAATACATTG AAACACAAGATGGACTTGCGGGTGCTGATGAAAAAGTAGTCGGTGAGTATAAAGATTCAGTTTTCAAAGATGCAAAAGAG AGTTTTACCAAAAAACAATATTTTAAGTCGATTGAACTATTTCAAAAGTCGTTATCAGTGAATCCAAGTCCCAAAAAAGA GGAAGAAGCATTATATTACATAGCTCTCTCTTACGATGCTTTAGGGAAACAAACCGAATCTCTTACTTATATCAATAAAG TTTTGAATAACAGTGATTATTCCCTCGACCAAGCATCTCTTTACAAAAAGGGAACAATTTATTTCAGACAAGGGAAATTT GAAAAAGCAGCAGGTATCTTTCAGACGATTGTAGACAAATACCCTAAAAACCAGATTACCGACAAGGCGATTGCATGGAA AAAAGAATCACTAGATCAGTTCACTGACCACAATGATTTAGATGATTCGGATGTATCGTCAGATTCTAATTCTAACAAAC CCAATTCGTTTTCACAGAAACCAGAATCGGGGAATGATTTAGAATTTTAG
Upstream 100 bases:
>100_bases CTTTAAAGTGTTTTTTGAAAAAGGAAACCAAATCCTATTCTCCGTCAAGAGTTGAATTTTGGACGAATCAAACCCTGAGT CAAGCGGGTAGAGGTAATTT
Downstream 100 bases:
>100_bases TTGGTTTCCATTAGAAACTCATTCGTGTGGGTATTGTAAAGAGCTTCCTCTAATCCGAAAGTTTTATAAATTTCCGGTAC AATATCAGCTAACGAATGTA
Product: hemolysin
Products: NA
Alternate protein names: Hemolysin
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSRVIVSLAGLLFIVAGLSTAYYQTNISAKEDQSQLVLERIAEGEEYLKQTNSHSKEKAIAIFSELAGKRGLEKFEFQIK YNQARALEKNSDFYPALDIYKDLKKNSNWKPEEKDKLSYSLGNLLLKIGNESEGKAHLESVLQSSSDNKLRSKSFMALGD HYYKIAQYETARKNYVLALQEDPNHTESRIGWGRTLRKLGKDWASFDVFDEYIETQDGLAGADEKVVGEYKDSVFKDAKE SFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQTESLTYINKVLNNSDYSLDQASLYKKGTIYFRQGKF EKAAGIFQTIVDKYPKNQITDKAIAWKKESLDQFTDHNDLDDSDVSSDSNSNKPNSFSQKPESGNDLEF
Sequences:
>Translated_389_residues MSRVIVSLAGLLFIVAGLSTAYYQTNISAKEDQSQLVLERIAEGEEYLKQTNSHSKEKAIAIFSELAGKRGLEKFEFQIK YNQARALEKNSDFYPALDIYKDLKKNSNWKPEEKDKLSYSLGNLLLKIGNESEGKAHLESVLQSSSDNKLRSKSFMALGD HYYKIAQYETARKNYVLALQEDPNHTESRIGWGRTLRKLGKDWASFDVFDEYIETQDGLAGADEKVVGEYKDSVFKDAKE SFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQTESLTYINKVLNNSDYSLDQASLYKKGTIYFRQGKF EKAAGIFQTIVDKYPKNQITDKAIAWKKESLDQFTDHNDLDDSDVSSDSNSNKPNSFSQKPESGNDLEF >Mature_388_residues SRVIVSLAGLLFIVAGLSTAYYQTNISAKEDQSQLVLERIAEGEEYLKQTNSHSKEKAIAIFSELAGKRGLEKFEFQIKY NQARALEKNSDFYPALDIYKDLKKNSNWKPEEKDKLSYSLGNLLLKIGNESEGKAHLESVLQSSSDNKLRSKSFMALGDH YYKIAQYETARKNYVLALQEDPNHTESRIGWGRTLRKLGKDWASFDVFDEYIETQDGLAGADEKVVGEYKDSVFKDAKES FTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQTESLTYINKVLNNSDYSLDQASLYKKGTIYFRQGKFE KAAGIFQTIVDKYPKNQITDKAIAWKKESLDQFTDHNDLDDSDVSSDSNSNKPNSFSQKPESGNDLEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44310; Mature: 44179
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRVIVSLAGLLFIVAGLSTAYYQTNISAKEDQSQLVLERIAEGEEYLKQTNSHSKEKAI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHH AIFSELAGKRGLEKFEFQIKYNQARALEKNSDFYPALDIYKDLKKNSNWKPEEKDKLSYS HHHHHHHHHCCCCCEEEEEEECHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH LGNLLLKIGNESEGKAHLESVLQSSSDNKLRSKSFMALGDHYYKIAQYETARKNYVLALQ HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC EDPNHTESRIGWGRTLRKLGKDWASFDVFDEYIETQDGLAGADEKVVGEYKDSVFKDAKE CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQTESLTYINKVLNNSDY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCC SLDQASLYKKGTIYFRQGKFEKAAGIFQTIVDKYPKNQITDKAIAWKKESLDQFTDHNDL CCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC DDSDVSSDSNSNKPNSFSQKPESGNDLEF CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SRVIVSLAGLLFIVAGLSTAYYQTNISAKEDQSQLVLERIAEGEEYLKQTNSHSKEKAI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHH AIFSELAGKRGLEKFEFQIKYNQARALEKNSDFYPALDIYKDLKKNSNWKPEEKDKLSYS HHHHHHHHHCCCCCEEEEEEECHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHH LGNLLLKIGNESEGKAHLESVLQSSSDNKLRSKSFMALGDHYYKIAQYETARKNYVLALQ HHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC EDPNHTESRIGWGRTLRKLGKDWASFDVFDEYIETQDGLAGADEKVVGEYKDSVFKDAKE CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH SFTKKQYFKSIELFQKSLSVNPSPKKEEEALYYIALSYDALGKQTESLTYINKVLNNSDY HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHCCCCC SLDQASLYKKGTIYFRQGKFEKAAGIFQTIVDKYPKNQITDKAIAWKKESLDQFTDHNDL CCCHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCC DDSDVSSDSNSNKPNSFSQKPESGNDLEF CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA