| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mrp [H]
Identifier: 183221720
GI number: 183221720
Start: 2419330
End: 2420382
Strand: Reverse
Name: mrp [H]
Synonym: LEPBI_I2349
Alternate gene names: 183221720
Gene position: 2420382-2419330 (Counterclockwise)
Preceding gene: 183221721
Following gene: 183221719
Centisome position: 67.24
GC content: 44.54
Gene sequence:
>1053_bases ATGGCAAATGATAAAATTGATTTAACCTCCATCCAACGGCAACTCATGCAAGTGAAACACCCGGAACTCAAAAAAGACAT TGTGAGTCTCGGAATGGTAGCACAAGTCACACCAACTGATGATGGAATTGAAATCCTCATCAAAACTCCCAATGCAGATC GTCGTTTGCAAATTGGACTTGAAGCACAAACAAGACAACTCATCTCCAAAATCGAAGGTGCTGGGAAAGTTAAGATTAAA TTTGAAGTCGACCAAAACCTCAAAATGGAAGATGGGAACCGAATCTTTGGTGTGAAAAAAGTCATCGCTGTTGGTTCGGG AAAAGGTGGGGTCGGTAAGTCCACTGTCACTGCGAACTTAGCGAGTACCCTTGCAATGAGTGGCAAAAAAGTGGGAATCT TAGATGCCGATATCTATGGACCTTCCCTCGGAAAGATGTTTGGGATCAATGGCCGAGTGGCATTAAAATCCGAAGAAGAT AAAATTTATCCAATCGAAAAACATGGAATCAAACTCATTTCCTTTTCCTTCCTTGTGACAGAAGACCAACCTGTTGTTTG GCGTGGACCAATGCTTGGGAAAGCCATCGAACAGTTCTTATACGATGTGGTTTGGGGGGAACTAGATTACCTTTTCATTG ACCTACCACCAGGAACAGGAGACGTCCAACTCTCTCTTGCCCAACTCATTGACCTTGATGGTGCTGTGATTGTCACCACT CCACAAGAAGTGGCAGTACTCGATGCAGGTCGTGCTGCTGCGATGTTCAAACAAGTGAAAGTTCCCATCCTCGGGATTGT GGAAAACATGAGTGGCTTTGCTTGTCCGAAATGTGGGCATGTCACCGATGTTTTTTCCAAAGGGGGAGGGGAAAAACTTT CCAAACAAGTCGGAGTCCCGGAACTGGGAGCAGTCCCTCTCACACTTGATGTCATGAGTTCGGGAGAATCGGGGAAACCA GCCTTACTTGACGCAAAAGACTCTCCTTTGAAAGAGGCATATTTTTTGATCGCAAAGAATTTAGAAGAACAAATTGCGAA TTGGGAAGAGTAA
Upstream 100 bases:
>100_bases CAAACCCATTACCGTCGTTTTATATATTCAGAAAACAAATTCACAGAGACAAATCCCATTCTTTACGAAGAGACTGAGGG AGTTGTCTAAAGGACATACC
Downstream 100 bases:
>100_bases AAATCACTTGTTTCTTCTCTGGCTTTTCTTAGTCTAAAGGATACACTATGAATTTTGAACGCGGTTCCAAACCAAATCCA ACAGGGAATTTAATCGCATA
Product: Mrp family ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MANDKIDLTSIQRQLMQVKHPELKKDIVSLGMVAQVTPTDDGIEILIKTPNADRRLQIGLEAQTRQLISKIEGAGKVKIK FEVDQNLKMEDGNRIFGVKKVIAVGSGKGGVGKSTVTANLASTLAMSGKKVGILDADIYGPSLGKMFGINGRVALKSEED KIYPIEKHGIKLISFSFLVTEDQPVVWRGPMLGKAIEQFLYDVVWGELDYLFIDLPPGTGDVQLSLAQLIDLDGAVIVTT PQEVAVLDAGRAAAMFKQVKVPILGIVENMSGFACPKCGHVTDVFSKGGGEKLSKQVGVPELGAVPLTLDVMSSGESGKP ALLDAKDSPLKEAYFLIAKNLEEQIANWEE
Sequences:
>Translated_350_residues MANDKIDLTSIQRQLMQVKHPELKKDIVSLGMVAQVTPTDDGIEILIKTPNADRRLQIGLEAQTRQLISKIEGAGKVKIK FEVDQNLKMEDGNRIFGVKKVIAVGSGKGGVGKSTVTANLASTLAMSGKKVGILDADIYGPSLGKMFGINGRVALKSEED KIYPIEKHGIKLISFSFLVTEDQPVVWRGPMLGKAIEQFLYDVVWGELDYLFIDLPPGTGDVQLSLAQLIDLDGAVIVTT PQEVAVLDAGRAAAMFKQVKVPILGIVENMSGFACPKCGHVTDVFSKGGGEKLSKQVGVPELGAVPLTLDVMSSGESGKP ALLDAKDSPLKEAYFLIAKNLEEQIANWEE >Mature_349_residues ANDKIDLTSIQRQLMQVKHPELKKDIVSLGMVAQVTPTDDGIEILIKTPNADRRLQIGLEAQTRQLISKIEGAGKVKIKF EVDQNLKMEDGNRIFGVKKVIAVGSGKGGVGKSTVTANLASTLAMSGKKVGILDADIYGPSLGKMFGINGRVALKSEEDK IYPIEKHGIKLISFSFLVTEDQPVVWRGPMLGKAIEQFLYDVVWGELDYLFIDLPPGTGDVQLSLAQLIDLDGAVIVTTP QEVAVLDAGRAAAMFKQVKVPILGIVENMSGFACPKCGHVTDVFSKGGGEKLSKQVGVPELGAVPLTLDVMSSGESGKPA LLDAKDSPLKEAYFLIAKNLEEQIANWEE
Specific function: Not Known. [C]
COG id: COG0489
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the Mrp/NBP35 ATP-binding proteins family [H]
Homologues:
Organism=Homo sapiens, GI157384956, Length=285, Percent_Identity=45.2631578947368, Blast_Score=241, Evalue=7e-64, Organism=Homo sapiens, GI6912540, Length=258, Percent_Identity=44.1860465116279, Blast_Score=205, Evalue=6e-53, Organism=Homo sapiens, GI118572611, Length=254, Percent_Identity=42.9133858267717, Blast_Score=192, Evalue=4e-49, Organism=Escherichia coli, GI87082045, Length=333, Percent_Identity=40.2402402402402, Blast_Score=250, Evalue=1e-67, Organism=Caenorhabditis elegans, GI25143050, Length=262, Percent_Identity=40.4580152671756, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6322188, Length=260, Percent_Identity=43.0769230769231, Blast_Score=200, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6321347, Length=262, Percent_Identity=38.1679389312977, Blast_Score=168, Evalue=1e-42, Organism=Drosophila melanogaster, GI24667611, Length=256, Percent_Identity=41.40625, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI221511043, Length=262, Percent_Identity=37.7862595419847, Blast_Score=181, Evalue=6e-46, Organism=Drosophila melanogaster, GI19921440, Length=257, Percent_Identity=38.5214007782101, Blast_Score=145, Evalue=3e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019591 - InterPro: IPR002744 - InterPro: IPR000808 [H]
Pfam domain/function: PF01883 DUF59; PF10609 ParA [H]
EC number: NA
Molecular weight: Translated: 37684; Mature: 37553
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANDKIDLTSIQRQLMQVKHPELKKDIVSLGMVAQVTPTDDGIEILIKTPNADRRLQIGL CCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCCCEEEEEECCCCCCEEEECC EAQTRQLISKIEGAGKVKIKFEVDQNLKMEDGNRIFGVKKVIAVGSGKGGVGKSTVTANL CHHHHHHHHHHCCCCEEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHH ASTLAMSGKKVGILDADIYGPSLGKMFGINGRVALKSEEDKIYPIEKHGIKLISFSFLVT HHHHHHCCCEEEEEECCCCCCCCHHEECCCCEEEEECCCCCEEEEHHCCEEEEEEEEEEE EDQPVVWRGPMLGKAIEQFLYDVVWGELDYLFIDLPPGTGDVQLSLAQLIDLDGAVIVTT CCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEEEC PQEVAVLDAGRAAAMFKQVKVPILGIVENMSGFACPKCGHVTDVFSKGGGEKLSKQVGVP CCCEEEEECCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCC ELGAVPLTLDVMSSGESGKPALLDAKDSPLKEAYFLIAKNLEEQIANWEE CCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure ANDKIDLTSIQRQLMQVKHPELKKDIVSLGMVAQVTPTDDGIEILIKTPNADRRLQIGL CCCCCHHHHHHHHHHHHCCCHHHHHHHHHCEEEEECCCCCCEEEEEECCCCCCEEEECC EAQTRQLISKIEGAGKVKIKFEVDQNLKMEDGNRIFGVKKVIAVGSGKGGVGKSTVTANL CHHHHHHHHHHCCCCEEEEEEEECCCCEECCCCEEEEEEEEEEECCCCCCCCCCHHHHHH ASTLAMSGKKVGILDADIYGPSLGKMFGINGRVALKSEEDKIYPIEKHGIKLISFSFLVT HHHHHHCCCEEEEEECCCCCCCCHHEECCCCEEEEECCCCCEEEEHHCCEEEEEEEEEEE EDQPVVWRGPMLGKAIEQFLYDVVWGELDYLFIDLPPGTGDVQLSLAQLIDLDGAVIVTT CCCCEEEECCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEHHHHHCCCCEEEEEC PQEVAVLDAGRAAAMFKQVKVPILGIVENMSGFACPKCGHVTDVFSKGGGEKLSKQVGVP CCCEEEEECCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHCCCC ELGAVPLTLDVMSSGESGKPALLDAKDSPLKEAYFLIAKNLEEQIANWEE CCCCCEEEEEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]