| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221631
Identifier: 183221631
GI number: 183221631
Start: 2327227
End: 2327754
Strand: Direct
Name: 183221631
Synonym: LEPBI_I2255
Alternate gene names: NA
Gene position: 2327227-2327754 (Clockwise)
Preceding gene: 183221630
Following gene: 183221632
Centisome position: 64.65
GC content: 24.05
Gene sequence:
>528_bases ATGTCTAAAAAAAAATTCATCGGAAAACTATTAGAATTTAAATATTCCGACAAAAAGGAAGTTTTTAAAGGAATCGTCTT AGATTATAATAATGATTGGACTTTTCTGTTATATAATCCAGTCGATTACGTAGCAGACGGATTCTTAATTCTCAAAAATT TACAGTCATTACGCTTTTCAAAGAATACCAATGACAATATGAATGAAAAAATTTTAAAAATTAAAATCGATAGTTTGGGT ATTCCCATTGATTTACCACTGCTTAAAATTGAAGATATTCTAAAATATATTTCTGAAAAATATGGAATTTTAGAAGTTCA AACTGATGCACTCAGTAAAAGTTATTTGGGAAAATTCAAGAAACTAGAAAATAATTGTATTATATTGAAAAATCTGACAC CAAAAGCGAAATGGAATGGTAATACTAAGTTGATCGAAAATAAAATTAGAATAATTAAATTTGATAACGATTACATAAAT TCAATAAAGTTGATTTTGAAAATAAAAACAAATAAATTCAATTTTTAA
Upstream 100 bases:
>100_bases GTGGCCAGTCCCTAACGTCCCGTTCGGGACTCAGGGCCAGCCTACGTCGGTTAGTCTAGTTCGTTAGTCGCAATCGCTCA AATTAATATTTAAAAGCATA
Downstream 100 bases:
>100_bases AATTCAAAATTCAAAAGAAGATTAAATCTGATTTAAATTTATAAAGGATTAGAATTCAAATTGGCTACAAATATTAATCT TTTATATTCGCGACTGCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSKKKFIGKLLEFKYSDKKEVFKGIVLDYNNDWTFLLYNPVDYVADGFLILKNLQSLRFSKNTNDNMNEKILKIKIDSLG IPIDLPLLKIEDILKYISEKYGILEVQTDALSKSYLGKFKKLENNCIILKNLTPKAKWNGNTKLIENKIRIIKFDNDYIN SIKLILKIKTNKFNF
Sequences:
>Translated_175_residues MSKKKFIGKLLEFKYSDKKEVFKGIVLDYNNDWTFLLYNPVDYVADGFLILKNLQSLRFSKNTNDNMNEKILKIKIDSLG IPIDLPLLKIEDILKYISEKYGILEVQTDALSKSYLGKFKKLENNCIILKNLTPKAKWNGNTKLIENKIRIIKFDNDYIN SIKLILKIKTNKFNF >Mature_174_residues SKKKFIGKLLEFKYSDKKEVFKGIVLDYNNDWTFLLYNPVDYVADGFLILKNLQSLRFSKNTNDNMNEKILKIKIDSLGI PIDLPLLKIEDILKYISEKYGILEVQTDALSKSYLGKFKKLENNCIILKNLTPKAKWNGNTKLIENKIRIIKFDNDYINS IKLILKIKTNKFNF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20508; Mature: 20376
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKKFIGKLLEFKYSDKKEVFKGIVLDYNNDWTFLLYNPVDYVADGFLILKNLQSLRFS CCHHHHHHHHHHCCCCCHHHHHCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCC KNTNDNMNEKILKIKIDSLGIPIDLPLLKIEDILKYISEKYGILEVQTDALSKSYLGKFK CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH KLENNCIILKNLTPKAKWNGNTKLIENKIRIIKFDNDYINSIKLILKIKTNKFNF HCCCCEEEEECCCCCCCCCCCCEEEECEEEEEEECCHHHCEEEEEEEEECCCCCC >Mature Secondary Structure SKKKFIGKLLEFKYSDKKEVFKGIVLDYNNDWTFLLYNPVDYVADGFLILKNLQSLRFS CHHHHHHHHHHCCCCCHHHHHCEEEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHCC KNTNDNMNEKILKIKIDSLGIPIDLPLLKIEDILKYISEKYGILEVQTDALSKSYLGKFK CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHH KLENNCIILKNLTPKAKWNGNTKLIENKIRIIKFDNDYINSIKLILKIKTNKFNF HCCCCEEEEECCCCCCCCCCCCEEEECEEEEEEECCHHHCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA