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The map label for this gene is 183221626

Identifier: 183221626

GI number: 183221626

Start: 2324566

End: 2324964

Strand: Direct

Name: 183221626

Synonym: LEPBI_I2250

Alternate gene names: NA

Gene position: 2324566-2324964 (Clockwise)

Preceding gene: 183221625

Following gene: 183221627

Centisome position: 64.58

GC content: 26.57

Gene sequence:

>399_bases
ATGTATCTAATTGATACAAATATTTGCATTTACCTTATTAAAAAGAAAAATATTAAACTCTTACAGAAATTTCAAAAGAA
TTATAGTAAAGGCATTTTTATTTCTTCACTCACTTTAGCTGAACTAGAATTTGGGGTAGAAAATAGTGAACATAAAGAGA
AAAATAGAATTTCTTTAATTGAATTTCTTACTATTTTTGAAGTTTTAAGCTTCGAGCAAAAAGACACTTTTGCATTCGGG
AAAATTAAAAGCGATTTAAGAAAATCAGGAAAAATGATTGGAACTATGGATGCATTATTAGCAGCCCAATCAGTTTCACG
AAACCTTATTTTTGTTACAAATAACACAAAAGAATTCGAAAGAATTAACAACTTGAAAATTGAGGATTGGACTATTTAA

Upstream 100 bases:

>100_bases
AAGCATGGAATACGTTTTTAGATGGATTAAATGGTTTTACAGATGATTTTCTAAGTGACGGAAGGATTGATTTAACGGAA
TCAGAAAGAGAACAATTTTA

Downstream 100 bases:

>100_bases
TCTCGCCACGTCGTATAACAGCGCATTAACGTTCCGGGAAGGTCTTGCGCCTTCCCTCCAGGCTTCGCCACATTGGTCTC
CGTCACACTCCTTGCAAGGC

Product: PilT protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MYLIDTNICIYLIKKKNIKLLQKFQKNYSKGIFISSLTLAELEFGVENSEHKEKNRISLIEFLTIFEVLSFEQKDTFAFG
KIKSDLRKSGKMIGTMDALLAAQSVSRNLIFVTNNTKEFERINNLKIEDWTI

Sequences:

>Translated_132_residues
MYLIDTNICIYLIKKKNIKLLQKFQKNYSKGIFISSLTLAELEFGVENSEHKEKNRISLIEFLTIFEVLSFEQKDTFAFG
KIKSDLRKSGKMIGTMDALLAAQSVSRNLIFVTNNTKEFERINNLKIEDWTI
>Mature_132_residues
MYLIDTNICIYLIKKKNIKLLQKFQKNYSKGIFISSLTLAELEFGVENSEHKEKNRISLIEFLTIFEVLSFEQKDTFAFG
KIKSDLRKSGKMIGTMDALLAAQSVSRNLIFVTNNTKEFERINNLKIEDWTI

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 15349; Mature: 15349

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLIDTNICIYLIKKKNIKLLQKFQKNYSKGIFISSLTLAELEFGVENSEHKEKNRISLI
CEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
EFLTIFEVLSFEQKDTFAFGKIKSDLRKSGKMIGTMDALLAAQSVSRNLIFVTNNTKEFE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHH
RINNLKIEDWTI
HHCCCCEEECCC
>Mature Secondary Structure
MYLIDTNICIYLIKKKNIKLLQKFQKNYSKGIFISSLTLAELEFGVENSEHKEKNRISLI
CEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHH
EFLTIFEVLSFEQKDTFAFGKIKSDLRKSGKMIGTMDALLAAQSVSRNLIFVTNNTKEFE
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHH
RINNLKIEDWTI
HHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]