Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183221624

Identifier: 183221624

GI number: 183221624

Start: 2323637

End: 2324053

Strand: Direct

Name: 183221624

Synonym: LEPBI_I2248

Alternate gene names: NA

Gene position: 2323637-2324053 (Clockwise)

Preceding gene: 183221623

Following gene: 183221625

Centisome position: 64.55

GC content: 27.34

Gene sequence:

>417_bases
ATGTTAAAAGTTCTATTAGATACAAATATTTATATTTCCGCAATTTTGTTTAATGGTAAACCCAAAGTTGTTTTACAAGA
TTTAATAGATGAGATTTTTATTGGATTTATCTCAAATGAAATTATCGATGAAATAGAGGAAACTTTATCAAAACCTAAAT
TCAAACTTCCAAATGATTTTATCCAGTATACAATTTCTGAAATCAGAAGTTCCACCACAATTATCAAAAATAAACCACTG
AAAGAATATCTGAATTTAAGAGATCGAGATGATTTTCACATTCTTGAAACTGCTTTTTCCGCAGATGTTGATTTTTTAAT
CACTGGTGATAAAGACCTTCTAGCTTTAGAAAAAATAAAAGAATTCAGAATCATAACTCCAGACGAGTATTTGAGAATAA
AAGAGGAACTAAGTTAA

Upstream 100 bases:

>100_bases
TCTTTGATTTCGGTGTTAAATCTTCTGAAAAATCGAATCTTACTGAAAATGATATTTTCGCAGAAATTAAAAATGTTAGA
AGAAGTAAAAAAGCTTCTTA

Downstream 100 bases:

>100_bases
GATTGCGACATCCGTGTCGCTCCCCGCAACGTCGCATAACACCGACTTACCGCTACGCTTCGGGACTAGCCCTCGCTCGG
CCTCCGGCAAATTCCCTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MLKVLLDTNIYISAILFNGKPKVVLQDLIDEIFIGFISNEIIDEIEETLSKPKFKLPNDFIQYTISEIRSSTTIIKNKPL
KEYLNLRDRDDFHILETAFSADVDFLITGDKDLLALEKIKEFRIITPDEYLRIKEELS

Sequences:

>Translated_138_residues
MLKVLLDTNIYISAILFNGKPKVVLQDLIDEIFIGFISNEIIDEIEETLSKPKFKLPNDFIQYTISEIRSSTTIIKNKPL
KEYLNLRDRDDFHILETAFSADVDFLITGDKDLLALEKIKEFRIITPDEYLRIKEELS
>Mature_138_residues
MLKVLLDTNIYISAILFNGKPKVVLQDLIDEIFIGFISNEIIDEIEETLSKPKFKLPNDFIQYTISEIRSSTTIIKNKPL
KEYLNLRDRDDFHILETAFSADVDFLITGDKDLLALEKIKEFRIITPDEYLRIKEELS

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16083; Mature: 16083

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKVLLDTNIYISAILFNGKPKVVLQDLIDEIFIGFISNEIIDEIEETLSKPKFKLPNDF
CEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IQYTISEIRSSTTIIKNKPLKEYLNLRDRDDFHILETAFSADVDFLITGDKDLLALEKIK
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHH
EFRIITPDEYLRIKEELS
HCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MLKVLLDTNIYISAILFNGKPKVVLQDLIDEIFIGFISNEIIDEIEETLSKPKFKLPNDF
CEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
IQYTISEIRSSTTIIKNKPLKEYLNLRDRDDFHILETAFSADVDFLITGDKDLLALEKIK
HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHH
EFRIITPDEYLRIKEELS
HCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA