| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221590
Identifier: 183221590
GI number: 183221590
Start: 2296326
End: 2297171
Strand: Direct
Name: 183221590
Synonym: LEPBI_I2212
Alternate gene names: NA
Gene position: 2296326-2297171 (Clockwise)
Preceding gene: 183221589
Following gene: 183221591
Centisome position: 63.79
GC content: 25.65
Gene sequence:
>846_bases ATGAGCATAAAAAATAATTTCGAATCATTATCAATAGCAATTGAAAAAACAAGCAAATTTCACTTGCAGTTATTAACGAT TGTAAATAAAGATCTCTTCCTAATTAATAATTATCTTTCAAGATCTAATGAACTATTAGAAATACGGGACGCAATCTATC TAATAAAAAAATGCTCAGATATATATAACACGACAATATCGTTAATTAAAAACAAAGAATTTTACCAATGTAAAATTTTA TATAGAAGTTTAATCGAACATTATCTTAAGGCGCAATACATTATATTCAGTTTAGATAAGGATATAAATTTCTCAAGAAA CTATCATTTGTATGGGCAAATTGAAGAATTTATAACTTACTTAAAAAACAAAAATATACACAACTTCCTAACGAAATCAC CCTTGCTTAATGAATGGGAAGAAGTTTATAAAAACTTTCACGTAATAAATCAATTGAATAAGAATCAAATTCAATCAGAA ATACAAAAATTTAATATAAAAACGATTATCAAAAAAATTGCAGAAATATTTGAGTCATTTCCACAAATACATGATCATTT CGAGGTTATTCTCGAAAGTTATGCAAGCTGTTCAATGTTCGTTCATGCAAGTCCAAGCGCCGGAGATTACTTTCAAGATA AAAATAATTATGAAGATGAAGAATTTTTTGATTTGATTAACATGGTAACAATGCCAATTTTAATGATTTTTGATACTTTA AAAACAATTATTATCTATTCTAGAATTAAATATAAAATCCAAACAGAGAGTTTCGATATTCTAAACACCTCACTACATGA AATTGCAGAAAACTTTAAGAACAAAGAGAGTTTTCTATCTGAATAA
Upstream 100 bases:
>100_bases CGCAAACTACGTGCCAGCCCCTAACGTCCCGGTCCGGGACTCAGGGTCAGCCTACGTTGATTAGCCTAGTTCGTTATGCG ACATGGAATAGTCTCAATTT
Downstream 100 bases:
>100_bases TTTCACGTCGCATAACAGCGACTTAACGCTACGCTTCGGGACAAGCCCTCGCTCGGGCTACGCCACATTCCTCTTCTGTC ACTCGCTTGCATATGCAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSIKNNFESLSIAIEKTSKFHLQLLTIVNKDLFLINNYLSRSNELLEIRDAIYLIKKCSDIYNTTISLIKNKEFYQCKIL YRSLIEHYLKAQYIIFSLDKDINFSRNYHLYGQIEEFITYLKNKNIHNFLTKSPLLNEWEEVYKNFHVINQLNKNQIQSE IQKFNIKTIIKKIAEIFESFPQIHDHFEVILESYASCSMFVHASPSAGDYFQDKNNYEDEEFFDLINMVTMPILMIFDTL KTIIIYSRIKYKIQTESFDILNTSLHEIAENFKNKESFLSE
Sequences:
>Translated_281_residues MSIKNNFESLSIAIEKTSKFHLQLLTIVNKDLFLINNYLSRSNELLEIRDAIYLIKKCSDIYNTTISLIKNKEFYQCKIL YRSLIEHYLKAQYIIFSLDKDINFSRNYHLYGQIEEFITYLKNKNIHNFLTKSPLLNEWEEVYKNFHVINQLNKNQIQSE IQKFNIKTIIKKIAEIFESFPQIHDHFEVILESYASCSMFVHASPSAGDYFQDKNNYEDEEFFDLINMVTMPILMIFDTL KTIIIYSRIKYKIQTESFDILNTSLHEIAENFKNKESFLSE >Mature_280_residues SIKNNFESLSIAIEKTSKFHLQLLTIVNKDLFLINNYLSRSNELLEIRDAIYLIKKCSDIYNTTISLIKNKEFYQCKILY RSLIEHYLKAQYIIFSLDKDINFSRNYHLYGQIEEFITYLKNKNIHNFLTKSPLLNEWEEVYKNFHVINQLNKNQIQSEI QKFNIKTIIKKIAEIFESFPQIHDHFEVILESYASCSMFVHASPSAGDYFQDKNNYEDEEFFDLINMVTMPILMIFDTLK TIIIYSRIKYKIQTESFDILNTSLHEIAENFKNKESFLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33512; Mature: 33381
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKNNFESLSIAIEKTSKFHLQLLTIVNKDLFLINNYLSRSNELLEIRDAIYLIKKCSD CCCCCCHHHHEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IYNTTISLIKNKEFYQCKILYRSLIEHYLKAQYIIFSLDKDINFSRNYHLYGQIEEFITY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHH LKNKNIHNFLTKSPLLNEWEEVYKNFHVINQLNKNQIQSEIQKFNIKTIIKKIAEIFESF HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PQIHDHFEVILESYASCSMFVHASPSAGDYFQDKNNYEDEEFFDLINMVTMPILMIFDTL HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KTIIIYSRIKYKIQTESFDILNTSLHEIAENFKNKESFLSE HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure SIKNNFESLSIAIEKTSKFHLQLLTIVNKDLFLINNYLSRSNELLEIRDAIYLIKKCSD CCCCCHHHHEEEEECCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH IYNTTISLIKNKEFYQCKILYRSLIEHYLKAQYIIFSLDKDINFSRNYHLYGQIEEFITY HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEHHHHHHHHHHH LKNKNIHNFLTKSPLLNEWEEVYKNFHVINQLNKNQIQSEIQKFNIKTIIKKIAEIFESF HHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH PQIHDHFEVILESYASCSMFVHASPSAGDYFQDKNNYEDEEFFDLINMVTMPILMIFDTL HHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KTIIIYSRIKYKIQTESFDILNTSLHEIAENFKNKESFLSE HHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA