| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221575
Identifier: 183221575
GI number: 183221575
Start: 2282333
End: 2282761
Strand: Direct
Name: 183221575
Synonym: LEPBI_I2196
Alternate gene names: NA
Gene position: 2282333-2282761 (Clockwise)
Preceding gene: 183221574
Following gene: 183221576
Centisome position: 63.4
GC content: 23.78
Gene sequence:
>429_bases TTGTATAAAATTCAAGTAAGAGTAAAATTCACCAACATGAACCAATTTTTAAATCAAACAATTGTATCGAACAAAATATT TAATTTACTGATACTAGCTTGCCCTATTTATCTAATTATCGCAAATATTGCCTTAAATGATAAAAATGTATTCTCTATAA TACTTCCTAACCTCATTCCTTTCTTTATATTTTTAGCAATTCTCTTCAAAATTAAAAATCTAGAAATTGTTTTACAAATA TGGTTTGGTTTAATAGCTTTGCTAAGTGTTATTTCGTTTATAATTGTACTTACTAATCTAATAAAAATTGACTTTGAAAA TACATTAGTTGATAAAAATACATATATAAGTTTGGCGAGAGATTTACTCAATACCATCATTTTCTTTCCGCTATTTCTTT CGGTTAAAAAGTATATAAAGAAAATTTAA
Upstream 100 bases:
>100_bases AGTTCGTTATACGTAATTGCGGAAAATCATTAATAATAAGATTAACGAAAAAAAAATATCAAGAAATTTTCCATAGAAAT TTCTAAGTTCAAACATTAGA
Downstream 100 bases:
>100_bases ACGACTAAATCTTTATCTTTTACTAAATAATTCAAAAATCATTATGCTATCTAAAATAGAACATATTTCGATTCCAATTC TTATATCAATAATCTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MYKIQVRVKFTNMNQFLNQTIVSNKIFNLLILACPIYLIIANIALNDKNVFSIILPNLIPFFIFLAILFKIKNLEIVLQI WFGLIALLSVISFIIVLTNLIKIDFENTLVDKNTYISLARDLLNTIIFFPLFLSVKKYIKKI
Sequences:
>Translated_142_residues MYKIQVRVKFTNMNQFLNQTIVSNKIFNLLILACPIYLIIANIALNDKNVFSIILPNLIPFFIFLAILFKIKNLEIVLQI WFGLIALLSVISFIIVLTNLIKIDFENTLVDKNTYISLARDLLNTIIFFPLFLSVKKYIKKI >Mature_142_residues MYKIQVRVKFTNMNQFLNQTIVSNKIFNLLILACPIYLIIANIALNDKNVFSIILPNLIPFFIFLAILFKIKNLEIVLQI WFGLIALLSVISFIIVLTNLIKIDFENTLVDKNTYISLARDLLNTIIFFPLFLSVKKYIKKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16513; Mature: 16513
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIQVRVKFTNMNQFLNQTIVSNKIFNLLILACPIYLIIANIALNDKNVFSIILPNLIP CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FFIFLAILFKIKNLEIVLQIWFGLIALLSVISFIIVLTNLIKIDFENTLVDKNTYISLAR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHH DLLNTIIFFPLFLSVKKYIKKI HHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYKIQVRVKFTNMNQFLNQTIVSNKIFNLLILACPIYLIIANIALNDKNVFSIILPNLIP CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FFIFLAILFKIKNLEIVLQIWFGLIALLSVISFIIVLTNLIKIDFENTLVDKNTYISLAR HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHH DLLNTIIFFPLFLSVKKYIKKI HHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA