Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221562
Identifier: 183221562
GI number: 183221562
Start: 2269241
End: 2269894
Strand: Direct
Name: 183221562
Synonym: LEPBI_I2183
Alternate gene names: NA
Gene position: 2269241-2269894 (Clockwise)
Preceding gene: 183221561
Following gene: 183221563
Centisome position: 63.04
GC content: 29.36
Gene sequence:
>654_bases ATGAAAATAGAGATAATCGCAAAAGAAGATAAATTTACTGAAATACGTTGTTTATTGGAATTCGACAATAAAAAAGGAAA CTTTTCTGGATCAAGAGGAGTAAACATTAGTGATAATATAGTTTCTCTAATAGAGTTGATTGAATCACATGACCCGAAAA CAATAAGTTCCGCATCAGCACCTCAATTAAGAGACTACTTATACAAAATTAAAATACCCTATGATTCAACGCCTATTTCA AATATGTACCGTTCATTCGCAGTAATCTCTGTATTTCTTCACTTAAATATCTTGATTGAAATATTAAATGAAAAAGACCC AAAATACAGACAACAAAGATTGAATAATTACCAATATCCGAATAAAGCGTTAAATGATTTTATGTGTTTCGAAAAAACTG GCCATACTGGCGGACAACCTACATTATATGTAATTCATAACGATATCATTGAAAATAATGGTGAGGATCTTGAAATATTA TTTGAACACGGATTAATTTTTAAAATAAAAACTGCATTGGTTGAGAATAAAAATTCATTCTTTGTACCTTTTGATATCCC CGATATCCGAAAAATTAACATCCCTGCTAAAGGAACTTGGAATAAAATAATTGAATTTAGAGAGAAATCAATAGAAAGAT TCGTATCCAAATGA
Upstream 100 bases:
>100_bases TACGTGCCAGCCCCTAACGTCCCTTCAGGGACTCAGGGTCAGCCTACGTCGGTTAGCCTAGTTCGTTATGCGCAACTATT ATAATTATAAAGGAGAATAT
Downstream 100 bases:
>100_bases ACTATTGTATGATTTTGTTTCAAAATTTTCTATTGGCCTTCATTATACCAATGGCCTTACCTATACTAAGTGCAGTTTTA GAAAAAGAAGAAAAAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKIEIIAKEDKFTEIRCLLEFDNKKGNFSGSRGVNISDNIVSLIELIESHDPKTISSASAPQLRDYLYKIKIPYDSTPIS NMYRSFAVISVFLHLNILIEILNEKDPKYRQQRLNNYQYPNKALNDFMCFEKTGHTGGQPTLYVIHNDIIENNGEDLEIL FEHGLIFKIKTALVENKNSFFVPFDIPDIRKINIPAKGTWNKIIEFREKSIERFVSK
Sequences:
>Translated_217_residues MKIEIIAKEDKFTEIRCLLEFDNKKGNFSGSRGVNISDNIVSLIELIESHDPKTISSASAPQLRDYLYKIKIPYDSTPIS NMYRSFAVISVFLHLNILIEILNEKDPKYRQQRLNNYQYPNKALNDFMCFEKTGHTGGQPTLYVIHNDIIENNGEDLEIL FEHGLIFKIKTALVENKNSFFVPFDIPDIRKINIPAKGTWNKIIEFREKSIERFVSK >Mature_217_residues MKIEIIAKEDKFTEIRCLLEFDNKKGNFSGSRGVNISDNIVSLIELIESHDPKTISSASAPQLRDYLYKIKIPYDSTPIS NMYRSFAVISVFLHLNILIEILNEKDPKYRQQRLNNYQYPNKALNDFMCFEKTGHTGGQPTLYVIHNDIIENNGEDLEIL FEHGLIFKIKTALVENKNSFFVPFDIPDIRKINIPAKGTWNKIIEFREKSIERFVSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25191; Mature: 25191
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEIIAKEDKFTEIRCLLEFDNKKGNFSGSRGVNISDNIVSLIELIESHDPKTISSASA CEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PQLRDYLYKIKIPYDSTPISNMYRSFAVISVFLHLNILIEILNEKDPKYRQQRLNNYQYP HHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC NKALNDFMCFEKTGHTGGQPTLYVIHNDIIENNGEDLEILFEHGLIFKIKTALVENKNSF HHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCEEEEECCCCEEEEEEHHHCCCCCE FVPFDIPDIRKINIPAKGTWNKIIEFREKSIERFVSK EEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKIEIIAKEDKFTEIRCLLEFDNKKGNFSGSRGVNISDNIVSLIELIESHDPKTISSASA CEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC PQLRDYLYKIKIPYDSTPISNMYRSFAVISVFLHLNILIEILNEKDPKYRQQRLNNYQYP HHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCC NKALNDFMCFEKTGHTGGQPTLYVIHNDIIENNGEDLEILFEHGLIFKIKTALVENKNSF HHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCEEEEECCCCEEEEEEHHHCCCCCE FVPFDIPDIRKINIPAKGTWNKIIEFREKSIERFVSK EEEECCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA