Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221557
Identifier: 183221557
GI number: 183221557
Start: 2265168
End: 2265836
Strand: Direct
Name: 183221557
Synonym: LEPBI_I2178
Alternate gene names: NA
Gene position: 2265168-2265836 (Clockwise)
Preceding gene: 183221556
Following gene: 183221558
Centisome position: 62.93
GC content: 26.91
Gene sequence:
>669_bases ATGAAAATGAAAAATATAACAAAATATAAATTTATAATCCTATTCTTTATCTTTTCGAATATATTCAGATGTACCATACC TATCCGAGAAATATACCAAGAGGATCTAGTTTTTCTATTTTCAATTCGTGAATTATCAAATCTTGAACTTATTAAAAAAT TTAACTTGAATAAAAACGAAAGTAATTCTATCGATTACTTCTTATTGTCAAGTGCATACAAAGAAGACACAAAAATTGAC GAAGCCGGAGGATTCCTGATTGAATTAATAGGAAAAGCTCAAATTAGGAAATTCGGAAGCGAGCAAAATTACAAAAGTGC ATTTATAATTGATATATTCAAAACCAAAATAGACTCAAGCTATGCTACTTTTGATTTTCTTGTGGCATTCTCAAAACTTG AAACACTTAATTTTAAAGAAAGACTACAAAAAATAGAATACAAATTTGATTCGAGATTAAACGAGAAGATAATGGAGCGT GTTTTTTTTGAAACCTATAATGAAACGGAAAGGCAAGAATGCATTTTAATGATAAAAAAAGAAATTGAGACAGAATTTTT AGAAAAATATCCAAATGCTATTCCAGATTTTATTTCCCAAAATTTGTATTATACAATATATAATAGGCAGTTACGCTGCT GGTTTCTCAATAAAAAAAATGAACAATAA
Upstream 100 bases:
>100_bases TTCGCAAGTGTCGTTCCAGTCCCTAACGTCCCGTTTCCGGGACTCAGGGCCAGCCTACGTCGGTTAGTCTAGTTCGTTAT GCGAAATGTTTTAAAAAAAA
Downstream 100 bases:
>100_bases AAATATTAGTTTATTTATAATAGCGACAATAAGCTTAAATTGTTTCCTTTCATCTATTCGAGAAAAATATTGGGATGATA CGGTCTTCATCTATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKMKNITKYKFIILFFIFSNIFRCTIPIREIYQEDLVFLFSIRELSNLELIKKFNLNKNESNSIDYFLLSSAYKEDTKID EAGGFLIELIGKAQIRKFGSEQNYKSAFIIDIFKTKIDSSYATFDFLVAFSKLETLNFKERLQKIEYKFDSRLNEKIMER VFFETYNETERQECILMIKKEIETEFLEKYPNAIPDFISQNLYYTIYNRQLRCWFLNKKNEQ
Sequences:
>Translated_222_residues MKMKNITKYKFIILFFIFSNIFRCTIPIREIYQEDLVFLFSIRELSNLELIKKFNLNKNESNSIDYFLLSSAYKEDTKID EAGGFLIELIGKAQIRKFGSEQNYKSAFIIDIFKTKIDSSYATFDFLVAFSKLETLNFKERLQKIEYKFDSRLNEKIMER VFFETYNETERQECILMIKKEIETEFLEKYPNAIPDFISQNLYYTIYNRQLRCWFLNKKNEQ >Mature_222_residues MKMKNITKYKFIILFFIFSNIFRCTIPIREIYQEDLVFLFSIRELSNLELIKKFNLNKNESNSIDYFLLSSAYKEDTKID EAGGFLIELIGKAQIRKFGSEQNYKSAFIIDIFKTKIDSSYATFDFLVAFSKLETLNFKERLQKIEYKFDSRLNEKIMER VFFETYNETERQECILMIKKEIETEFLEKYPNAIPDFISQNLYYTIYNRQLRCWFLNKKNEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26852; Mature: 26852
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKNITKYKFIILFFIFSNIFRCTIPIREIYQEDLVFLFSIRELSNLELIKKFNLNKNE CCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC SNSIDYFLLSSAYKEDTKIDEAGGFLIELIGKAQIRKFGSEQNYKSAFIIDIFKTKIDSS CCCCEEEEEHHHHHCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCC YATFDFLVAFSKLETLNFKERLQKIEYKFDSRLNEKIMERVFFETYNETERQECILMIKK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EIETEFLEKYPNAIPDFISQNLYYTIYNRQLRCWFLNKKNEQ HHHHHHHHHCCCHHHHHHHCCCEEEEECCEEEEEEECCCCCC >Mature Secondary Structure MKMKNITKYKFIILFFIFSNIFRCTIPIREIYQEDLVFLFSIRELSNLELIKKFNLNKNE CCCCCHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCC SNSIDYFLLSSAYKEDTKIDEAGGFLIELIGKAQIRKFGSEQNYKSAFIIDIFKTKIDSS CCCCEEEEEHHHHHCCCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHCCC YATFDFLVAFSKLETLNFKERLQKIEYKFDSRLNEKIMERVFFETYNETERQECILMIKK HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH EIETEFLEKYPNAIPDFISQNLYYTIYNRQLRCWFLNKKNEQ HHHHHHHHHCCCHHHHHHHCCCEEEEECCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA