Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221555
Identifier: 183221555
GI number: 183221555
Start: 2263315
End: 2263983
Strand: Direct
Name: 183221555
Synonym: LEPBI_I2176
Alternate gene names: NA
Gene position: 2263315-2263983 (Clockwise)
Preceding gene: 183221554
Following gene: 183221556
Centisome position: 62.88
GC content: 26.76
Gene sequence:
>669_bases ATGAAACAAATCATTAGCAAAAAAGATTTAACATATATAATAATCTTTCTAGTCATGGTAAATCTAGTAATATTCACACG TAATTTCTATCAAAATCAAAAAGTTTTTGAAGCGATTGGATTCCTTTCCTCTGTTGTTTCGATAATACTTTCCGTATTAG CTATTATTTATACATTCTTTCAGAATTTCCACTCAAGCACTGCTATAGAACAAATCAATAGCGCTTCTAAAAATTTGTCT GAAATTTCTACAAAAATAAAAGATGCAATGAGCAGTTTTGAAAAAGTTTCTGATAACCTAAACTCAGATCTTGAAATAAA ATTTTCTGGAGTAAAGAAAGACTTTGGGGATATAACACGGGATTTAATAAACGATATTTACAAGAAGACCTCCGAAGAAA GAAAAGAACCCGTACATATCATAAAGGCAGACCATAAAAACATAATATTAAATTTAATTAATTATAACAAAAATTATACT TTGAAAAATGTGCTAATCGAAATCGATAAATTTTCAAAGAAAGAACTCATTACAATCACGGATTTAATTATAATTATAAA CTCATTAAATATATTTAATGAAGCGGAGAAAGATGTAAATGCCGAGATAAACCTAGGATACTTTTTCTTTTTAATGGATG GATATATTAAGCATATTAGATATTTATGA
Upstream 100 bases:
>100_bases GCAAGCTACGTGCCAGTCCCTAACGTCCCGTTCTGGACTCAGGGTCGAGGAACGTCGTTAAGTCTAGTTCGTTATACGCA ATTTTTGAAAAGGATACAAA
Downstream 100 bases:
>100_bases ATTTACTAAAGTAGAAAAAGGATTTAAAATCAAAAAAGGAAACAACGATATTTCAGATATATTAATTTAAAATCAAAAAC TGCGTATAACAGCGACTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MKQIISKKDLTYIIIFLVMVNLVIFTRNFYQNQKVFEAIGFLSSVVSIILSVLAIIYTFFQNFHSSTAIEQINSASKNLS EISTKIKDAMSSFEKVSDNLNSDLEIKFSGVKKDFGDITRDLINDIYKKTSEERKEPVHIIKADHKNIILNLINYNKNYT LKNVLIEIDKFSKKELITITDLIIIINSLNIFNEAEKDVNAEINLGYFFFLMDGYIKHIRYL
Sequences:
>Translated_222_residues MKQIISKKDLTYIIIFLVMVNLVIFTRNFYQNQKVFEAIGFLSSVVSIILSVLAIIYTFFQNFHSSTAIEQINSASKNLS EISTKIKDAMSSFEKVSDNLNSDLEIKFSGVKKDFGDITRDLINDIYKKTSEERKEPVHIIKADHKNIILNLINYNKNYT LKNVLIEIDKFSKKELITITDLIIIINSLNIFNEAEKDVNAEINLGYFFFLMDGYIKHIRYL >Mature_222_residues MKQIISKKDLTYIIIFLVMVNLVIFTRNFYQNQKVFEAIGFLSSVVSIILSVLAIIYTFFQNFHSSTAIEQINSASKNLS EISTKIKDAMSSFEKVSDNLNSDLEIKFSGVKKDFGDITRDLINDIYKKTSEERKEPVHIIKADHKNIILNLINYNKNYT LKNVLIEIDKFSKKELITITDLIIIINSLNIFNEAEKDVNAEINLGYFFFLMDGYIKHIRYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25728; Mature: 25728
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQIISKKDLTYIIIFLVMVNLVIFTRNFYQNQKVFEAIGFLSSVVSIILSVLAIIYTFF CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNFHSSTAIEQINSASKNLSEISTKIKDAMSSFEKVSDNLNSDLEIKFSGVKKDFGDITR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH DLINDIYKKTSEERKEPVHIIKADHKNIILNLINYNKNYTLKNVLIEIDKFSKKELITIT HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEECCCCCCHHHHHHHHHHHCCCCHHHHHH DLIIIINSLNIFNEAEKDVNAEINLGYFFFLMDGYIKHIRYL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKQIISKKDLTYIIIFLVMVNLVIFTRNFYQNQKVFEAIGFLSSVVSIILSVLAIIYTFF CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QNFHSSTAIEQINSASKNLSEISTKIKDAMSSFEKVSDNLNSDLEIKFSGVKKDFGDITR HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHH DLINDIYKKTSEERKEPVHIIKADHKNIILNLINYNKNYTLKNVLIEIDKFSKKELITIT HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHEECCCCCCHHHHHHHHHHHCCCCHHHHHH DLIIIINSLNIFNEAEKDVNAEINLGYFFFLMDGYIKHIRYL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA