Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221547
Identifier: 183221547
GI number: 183221547
Start: 2254911
End: 2255354
Strand: Direct
Name: 183221547
Synonym: LEPBI_I2166
Alternate gene names: NA
Gene position: 2254911-2255354 (Clockwise)
Preceding gene: 183221546
Following gene: 183221548
Centisome position: 62.64
GC content: 30.63
Gene sequence:
>444_bases ATGGATAAATTGGAAGAGAAAGCTTTATCAGATATTAATGAATATGGATGTCATATTCTACATGTAATGGAGGATGAGGA GAATCCCTGCTTTAGTTACTCAATAGGAATTCAAAAAGTATCGAACCAGTCTGAAATTATCATTACCGGGTTAAAATTTG AACTTACACATAGTATTATTAACAATTATAACAACCAAATCAAGTTAGGTAAAAGTTTCAAAACAGATACCTTTTACAGT GGTTTTTTAGAAAACTTTGATGTTATGTTCAAAAACGTTAACAAGATATACTTTAAAGAATATTTTGGTTGGGCTAGATG GCTATATAAAGGAGATAATTTTAATGCTCTTCAATTAATTTATCCCGATGTAGATGGTATCTGGCCTTGGCAGGAAAATG CCTCTACCGATTTTAAATGGTTTATTCCGAATCTATATGATTGA
Upstream 100 bases:
>100_bases AGTGTCGTTCCAGTCCCTAACGTCCCGTTCGGGACTCAGGGCCAGCCTACGTCGTTAAGGCTAGTTCGTTATTTGCAATG GCCTAAAAAATTAATTATTT
Downstream 100 bases:
>100_bases AATAATAAAACAGATTAATGATAGCTGGAGTTTGACAGGACTTTCGGCCTATCAAATTATACAAATCAATGATTTTGGAA ATATAATTATTTAAGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MDKLEEKALSDINEYGCHILHVMEDEENPCFSYSIGIQKVSNQSEIIITGLKFELTHSIINNYNNQIKLGKSFKTDTFYS GFLENFDVMFKNVNKIYFKEYFGWARWLYKGDNFNALQLIYPDVDGIWPWQENASTDFKWFIPNLYD
Sequences:
>Translated_147_residues MDKLEEKALSDINEYGCHILHVMEDEENPCFSYSIGIQKVSNQSEIIITGLKFELTHSIINNYNNQIKLGKSFKTDTFYS GFLENFDVMFKNVNKIYFKEYFGWARWLYKGDNFNALQLIYPDVDGIWPWQENASTDFKWFIPNLYD >Mature_147_residues MDKLEEKALSDINEYGCHILHVMEDEENPCFSYSIGIQKVSNQSEIIITGLKFELTHSIINNYNNQIKLGKSFKTDTFYS GFLENFDVMFKNVNKIYFKEYFGWARWLYKGDNFNALQLIYPDVDGIWPWQENASTDFKWFIPNLYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17442; Mature: 17442
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKLEEKALSDINEYGCHILHVMEDEENPCFSYSIGIQKVSNQSEIIITGLKFELTHSII CCHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECEEECCCCCEEEEEECHHHHHHHHH NNYNNQIKLGKSFKTDTFYSGFLENFDVMFKNVNKIYFKEYFGWARWLYKGDNFNALQLI HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE YPDVDGIWPWQENASTDFKWFIPNLYD ECCCCCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MDKLEEKALSDINEYGCHILHVMEDEENPCFSYSIGIQKVSNQSEIIITGLKFELTHSII CCHHHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECEEECCCCCEEEEEECHHHHHHHHH NNYNNQIKLGKSFKTDTFYSGFLENFDVMFKNVNKIYFKEYFGWARWLYKGDNFNALQLI HCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEE YPDVDGIWPWQENASTDFKWFIPNLYD ECCCCCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA