| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pgk
Identifier: 183221463
GI number: 183221463
Start: 2175861
End: 2177051
Strand: Direct
Name: pgk
Synonym: LEPBI_I2081
Alternate gene names: 183221463
Gene position: 2175861-2177051 (Clockwise)
Preceding gene: 183221462
Following gene: 183221464
Centisome position: 60.45
GC content: 45.26
Gene sequence:
>1191_bases ATGAAATTACCTCTTCTCGAAGAACAAAATCTAAAAGGAAAACGAGTCTTTGTTCGTGTGGATTTCAATGTCCCTGTGGA AAACGGAAAAGCAACGGACAGAACTCGGATTGAAAAAACCCTCCCTACTTTGGAACTTCTGATTTCCAAAGGTGCTAAAA TCATTTTGGGAAGCCACTTAGGTCGCCCGAAAGGTGGACCGGAACCGAAGTATTCCATGAAACCGGTGTTTGATGTTCTT TCCGAACTTGTCAAAACCAAAGTGAGTTTCTCGGAATCTGTGATTGGTTCCGATGTGGTGAAAATGACGAATGCGCTTGG GGAAGGTGAAATCCTACTTTTAGAAAACCTTCGGTTCCATAAGGAAGAAGAGGAAAATGTTGCCAGTTTCTGTAAGGAAC TGGCAAAACTCGCTGATGTTTATGTCAATGATGCGTTCGGAACGGCACACAGAGCACATGCTTCGACAGAAGGTGTGGCC CACCTACTCCCTGCCTTTGCGGGACTACTCATGCGAAAAGAAATTGAAGTCCTCAGTGGCCTACTCGCAAAACCTGAGCG TCCTTTTGTGGCTATTGTGGGTGGATCCAAAGTCAGTTCCAAATTTGCCATTTTAAAAAACCTCCTCGAGAAGGTAGACC ACCTCCTCATTGGTGGGGGTATGGCATACACGTTTTTAAAATCAAGAGCGGTTCCTGTGGGAAAATCCCTTGTGGAACCA GAATTTGAATCCCAAGCCTTCCAACTCATTGACCGAGCTGGGATCCAAGGGGTTGACCTGCAAATTCCAGTGGACCACAT CATTGCGGATGCCTTTGATCCCAATGCCAAAACAAAGTCTGTGGACAAAATGGGAATCATCGATGGTTGGATGGGAATGG ACATTGGACCAAAGACCATCGACAACTATGTCAAAGCGATAAAAGATGCCAAAACCATTTTATGGAACGGCCCAATGGGT GTCTTTGAAATGGATAAGTTCTCAAAAGGAACCATCGAAATCGCCAAAGCCATCAGTAAATCCAAGGCCAAAACCGTTGT GGGTGGTGGTGATTCCATTGCCGCTGTGAACAAAGCGGGAGTAGCGGACAAAATCACTCATATTTCCACAGGTGGAGGTG CTTCCTTAGAATTTTTGGAAGGACGAACTCTCCCTGGCGTACAATGTTTACTCCCAAAGGAAGAAAAATAA
Upstream 100 bases:
>100_bases AGCCCTACTTTTTTCAAACTCGTATCTTGGTATGACAATGAAATGGGATACTCCAACCGAGTCCTCGACCTAGTTCGTTA TATGGCAAAAAAAGGCTAAG
Downstream 100 bases:
>100_bases AATGAGAAAGAAGATCATCGCAGGGAATTGGAAAATGAACCTCACGCTAGCGGAGGCAAAAGAAATCACCAAAGGTTTAC TCTCGGCTTGTGACTCTTCT
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKLPLLEEQNLKGKRVFVRVDFNVPVENGKATDRTRIEKTLPTLELLISKGAKIILGSHLGRPKGGPEPKYSMKPVFDVL SELVKTKVSFSESVIGSDVVKMTNALGEGEILLLENLRFHKEEEENVASFCKELAKLADVYVNDAFGTAHRAHASTEGVA HLLPAFAGLLMRKEIEVLSGLLAKPERPFVAIVGGSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEP EFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTIDNYVKAIKDAKTILWNGPMG VFEMDKFSKGTIEIAKAISKSKAKTVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCLLPKEEK
Sequences:
>Translated_396_residues MKLPLLEEQNLKGKRVFVRVDFNVPVENGKATDRTRIEKTLPTLELLISKGAKIILGSHLGRPKGGPEPKYSMKPVFDVL SELVKTKVSFSESVIGSDVVKMTNALGEGEILLLENLRFHKEEEENVASFCKELAKLADVYVNDAFGTAHRAHASTEGVA HLLPAFAGLLMRKEIEVLSGLLAKPERPFVAIVGGSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEP EFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTIDNYVKAIKDAKTILWNGPMG VFEMDKFSKGTIEIAKAISKSKAKTVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCLLPKEEK >Mature_396_residues MKLPLLEEQNLKGKRVFVRVDFNVPVENGKATDRTRIEKTLPTLELLISKGAKIILGSHLGRPKGGPEPKYSMKPVFDVL SELVKTKVSFSESVIGSDVVKMTNALGEGEILLLENLRFHKEEEENVASFCKELAKLADVYVNDAFGTAHRAHASTEGVA HLLPAFAGLLMRKEIEVLSGLLAKPERPFVAIVGGSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEP EFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTIDNYVKAIKDAKTILWNGPMG VFEMDKFSKGTIEIAKAISKSKAKTVVGGGDSIAAVNKAGVADKITHISTGGGASLEFLEGRTLPGVQCLLPKEEK
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=407, Percent_Identity=44.4717444717445, Blast_Score=338, Evalue=6e-93, Organism=Homo sapiens, GI31543397, Length=407, Percent_Identity=44.2260442260442, Blast_Score=335, Evalue=3e-92, Organism=Escherichia coli, GI1789294, Length=401, Percent_Identity=42.8927680798005, Blast_Score=298, Evalue=4e-82, Organism=Caenorhabditis elegans, GI17508823, Length=410, Percent_Identity=46.0975609756098, Blast_Score=358, Evalue=3e-99, Organism=Saccharomyces cerevisiae, GI6319857, Length=409, Percent_Identity=44.7432762836186, Blast_Score=330, Evalue=3e-91, Organism=Drosophila melanogaster, GI17136394, Length=406, Percent_Identity=44.0886699507389, Blast_Score=310, Evalue=8e-85, Organism=Drosophila melanogaster, GI24581203, Length=407, Percent_Identity=41.031941031941, Blast_Score=293, Evalue=2e-79,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_LEPBA (B0SB21)
Other databases:
- EMBL: CP000777 - RefSeq: YP_001963105.1 - ProteinModelPortal: B0SB21 - SMR: B0SB21 - GeneID: 6388573 - GenomeReviews: CP000777_GR - KEGG: lbf:LBF_2027 - HOGENOM: HBG453500 - OMA: NCAIILP - ProtClustDB: PRK00073 - BioCyc: LBIF355278:LBF_2027-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 42739; Mature: 42739
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 36-36 BINDING 118-118 BINDING 151-151 BINDING 201-201 BINDING 292-292 BINDING 323-323
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPLLEEQNLKGKRVFVRVDFNVPVENGKATDRTRIEKTLPTLELLISKGAKIILGSHL CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC GRPKGGPEPKYSMKPVFDVLSELVKTKVSFSESVIGSDVVKMTNALGEGEILLLENLRFH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC KEEEENVASFCKELAKLADVYVNDAFGTAHRAHASTEGVAHLLPAFAGLLMRKEIEVLSG CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LLAKPERPFVAIVGGSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEP HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCC EFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTI CHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHHH DNYVKAIKDAKTILWNGPMGVFEMDKFSKGTIEIAKAISKSKAKTVVGGGDSIAAVNKAG HHHHHHHHHCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEHHHHCC VADKITHISTGGGASLEFLEGRTLPGVQCLLPKEEK CHHHHHEEECCCCCCEEEECCCCCCCEEECCCCCCC >Mature Secondary Structure MKLPLLEEQNLKGKRVFVRVDFNVPVENGKATDRTRIEKTLPTLELLISKGAKIILGSHL CCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCC GRPKGGPEPKYSMKPVFDVLSELVKTKVSFSESVIGSDVVKMTNALGEGEILLLENLRFH CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCC KEEEENVASFCKELAKLADVYVNDAFGTAHRAHASTEGVAHLLPAFAGLLMRKEIEVLSG CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH LLAKPERPFVAIVGGSKVSSKFAILKNLLEKVDHLLIGGGMAYTFLKSRAVPVGKSLVEP HHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHCCC EFESQAFQLIDRAGIQGVDLQIPVDHIIADAFDPNAKTKSVDKMGIIDGWMGMDIGPKTI CHHHHHHHHHHHCCCCCCEEECCHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCHHHH DNYVKAIKDAKTILWNGPMGVFEMDKFSKGTIEIAKAISKSKAKTVVGGGDSIAAVNKAG HHHHHHHHHCCEEEECCCCCCEECCCCCCCHHHHHHHHHHHHCCEEECCCCCEEHHHHCC VADKITHISTGGGASLEFLEGRTLPGVQCLLPKEEK CHHHHHEEECCCCCCEEEECCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA