Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 183221459

GI number: 183221459

Start: 2169954

End: 2172464

Strand: Direct

Name: trg [C]

Synonym: LEPBI_I2077

Alternate gene names: 183221459

Gene position: 2169954-2172464 (Clockwise)

Preceding gene: 183221454

Following gene: 183221460

Centisome position: 60.28

GC content: 37.24

Gene sequence:

>2511_bases
ATGGACATACGGAAAATGATCAAATTTATAATTTTTGGTCTTGAAGGTTTTAACTACTTAATTGGATTCCCGATTTTACT
GTCATATATTTATTTTTTTACGCAATGGACAACCGAAGAACTTCAAATCATTCTAATTTCCACAGCGATTATCGTCGTCT
TTTTACTTAGTTTTTGTATCACATTTTATTGGATTCGGTTTTCAAGCGTTTACCGTATTTTTAATGGAACTGCGACAAAT
AAGGACAACCACAAAGCTTACTTCTGGCTCGACCATCTCGAAAAGGTATCCATGATTGATATCATCATTCGGTATTCGGT
TGGGTATCTATTTGTCCTTGTGGCCCTTCTTGTGTTCCAAAAGTCCATAAATTTTGTCCTTCTCAGTGAACTTGCCATTG
GACTTGGAATGACGGTTGCCTTTACGATTTTATTCCAATCGATTTTCATTGGATATGTAGAAACCAAATTCAATACCAAA
GGCATTCTTCTTTCCATACGATTGGATAAAAACTCAAGGATCAATACCAGAAGGTTATCACGAAACTTAGGTTTCCAAAC
TGTCCTTGCCTTTTTAGCGGCGATTCTACTTTTGTTTATCATCAATTATCGTATGAACTTCAAACAAGAGTTAGATCTTG
TGAATACAACGATGCAACAATCGGTGATGGATTCGGAATCTTTGATGCGACTGACCCTTGTTGATTTTCGAGACAAATTG
ACAATTTCCATTTTTACGGAAAACAAACTGAAAGACCAAATCGTAAAACGGAACTTAAATGGAATACGGAATGTTCTAAA
TGAAATCCAACTAAGAAGTACAAATCATGCCGTGGAAGCATTATTTTATTATAAACCAGAAGATGGAATTTTTATTTCTA
CCAATGAATATGACAAATCCAAAACAGGTGGGATTTTTTACATTGAGGATGGTGATTTAGCAAGACAAGGGCCACTCCGA
CATACAAGCATTCGTTCTCGGATTTCAGGAGATATTGTTTCCCCATACACTCTACCTGTTTATGAAAACAACCAGTTCCA
AGGTTATGTGGGGGGATTTCTGAATATCGGAAAACTTTCCAGTTTTATCTTAGGCAATTTAAAGATCGGAAATTCAGGAA
AAGTTGGGTTTTTTGACGGTGACGGAACCATTGTTTATTTTACCGATAAAAAAGAAATTGGGAACAACGCCAAAACAATG
TTAGTCTTTGATACGCCTTACCAAAGTAAGGAGGCTCTTGGATTTGTAGATTCCACAGAAGACGGATCCCAAAAACGAAT
CTTTTTTGTCAAAAACCCAGAATTCAATTATATCATCTATTGTATTTTTGAAAATGCAGAATTGTATGAAAAAACACTCA
CTAGCCTACTCATGACTCTTGGGATTTCCATTTTGGTCGTACTCATGATCGGTATTGTCACAGTGCTTGTGATTGAATCT
AAACTGAAACCATTGGAACGCATCAAAGTTCGCATCAGTGAGATGGTCAAAGGAAACTTAAAATCAGATTTTTATGATGC
CAGTCGGGATGAAATTGGTAGTATGGCCAACGCTATGTTTGAATTCCAAACCAAACTACGCCAAATTGTCAACCAAACTC
AAAATGTATCCACAGAACTAACCAATACAAGTTCCGAAATTTATGAATCTATGTTAACACTTTCGGATGCAGCACAAAAC
CAAGCAGCCAGTAGCGAAGAAATTTCAGCATCCATTGAAGAAATCACAGCAGGCATTGAAAGTGTGGCGCAAAGAACAGA
AACACAATCTTTCACATTAGCATCACTTATGAAAAAAATGACTGAGTTAAATCATGCAGTTTCAGAGATCGATAAAAAGT
TCCAAATTGCAGATGTCCGAGTGGAAGAAATCACAAAAGATGCGAAAAAAGGAGAATCTTCACTTGGTGAAATGAAACTC
TCCATGGACAAAATTTATCAGTCCTCGTCAGAAATGACAAATGTTGTCGAAATCATTCATAATATTTCAGAACAAATCAA
CTTACTTGCACTGAATGCCGCCATCGAAGCAGCAAGAGCGGGTGCCAGTGGCCGAGGGTTTGCCGTTGTCGCAGATGAAA
TTTCCAAACTCGCCGATAAAACAGCCAAATCGATCGATGACATTGAAGAACTCATCAAACAGAACGAAGTCGAAATCAAC
CAAGGCCAAGAAAAAATTGACCAATCCATTTCCATTTTGAGTGAGACCATCACTGGAGTGAATTCAATCAATCAAATGAC
GAAAGAAATCCGAACTGTGGTACAAAAACAAATTGAGACAAATGAAGAAGTGAATGAAGGTGTCACTCAAATTCGAGAAC
TTTCGGAAATGATCAGAGAGGCCACAGAAGAACAAAAAACGGCAATGATGGAAATCTCACGTTCGATCGCCGAAATCAAT
AACCATGCCCAAACCACAGCGATTTCAAGTGATGGCACAAAGTCAAATTCACAAAACATGAACCAACTCACAGAAAGTTT
ACGTAAAGAGATTAACTATTTCCATGTCTAA

Upstream 100 bases:

>100_bases
ATTTTTTCTTGGATGGTTTTTAGTACAAGTGAGTCTTTCATAAAGAGTTGATTCAGGAATTTTACGTTTACAATTCTTAG
ACAATCTGTATCCCTATGGT

Downstream 100 bases:

>100_bases
ACAAAAAAGTAAAGTACCACTCAAAACAAAACTCATCGCCATTCTTTTACCGATGTCCATCGGATTAATGGGTGCGCTGT
TTGTGAAATATAAGGTTCTA

Product: putative methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 836; Mature: 836

Protein sequence:

>836_residues
MDIRKMIKFIIFGLEGFNYLIGFPILLSYIYFFTQWTTEELQIILISTAIIVVFLLSFCITFYWIRFSSVYRIFNGTATN
KDNHKAYFWLDHLEKVSMIDIIIRYSVGYLFVLVALLVFQKSINFVLLSELAIGLGMTVAFTILFQSIFIGYVETKFNTK
GILLSIRLDKNSRINTRRLSRNLGFQTVLAFLAAILLLFIINYRMNFKQELDLVNTTMQQSVMDSESLMRLTLVDFRDKL
TISIFTENKLKDQIVKRNLNGIRNVLNEIQLRSTNHAVEALFYYKPEDGIFISTNEYDKSKTGGIFYIEDGDLARQGPLR
HTSIRSRISGDIVSPYTLPVYENNQFQGYVGGFLNIGKLSSFILGNLKIGNSGKVGFFDGDGTIVYFTDKKEIGNNAKTM
LVFDTPYQSKEALGFVDSTEDGSQKRIFFVKNPEFNYIIYCIFENAELYEKTLTSLLMTLGISILVVLMIGIVTVLVIES
KLKPLERIKVRISEMVKGNLKSDFYDASRDEIGSMANAMFEFQTKLRQIVNQTQNVSTELTNTSSEIYESMLTLSDAAQN
QAASSEEISASIEEITAGIESVAQRTETQSFTLASLMKKMTELNHAVSEIDKKFQIADVRVEEITKDAKKGESSLGEMKL
SMDKIYQSSSEMTNVVEIIHNISEQINLLALNAAIEAARAGASGRGFAVVADEISKLADKTAKSIDDIEELIKQNEVEIN
QGQEKIDQSISILSETITGVNSINQMTKEIRTVVQKQIETNEEVNEGVTQIRELSEMIREATEEQKTAMMEISRSIAEIN
NHAQTTAISSDGTKSNSQNMNQLTESLRKEINYFHV

Sequences:

>Translated_836_residues
MDIRKMIKFIIFGLEGFNYLIGFPILLSYIYFFTQWTTEELQIILISTAIIVVFLLSFCITFYWIRFSSVYRIFNGTATN
KDNHKAYFWLDHLEKVSMIDIIIRYSVGYLFVLVALLVFQKSINFVLLSELAIGLGMTVAFTILFQSIFIGYVETKFNTK
GILLSIRLDKNSRINTRRLSRNLGFQTVLAFLAAILLLFIINYRMNFKQELDLVNTTMQQSVMDSESLMRLTLVDFRDKL
TISIFTENKLKDQIVKRNLNGIRNVLNEIQLRSTNHAVEALFYYKPEDGIFISTNEYDKSKTGGIFYIEDGDLARQGPLR
HTSIRSRISGDIVSPYTLPVYENNQFQGYVGGFLNIGKLSSFILGNLKIGNSGKVGFFDGDGTIVYFTDKKEIGNNAKTM
LVFDTPYQSKEALGFVDSTEDGSQKRIFFVKNPEFNYIIYCIFENAELYEKTLTSLLMTLGISILVVLMIGIVTVLVIES
KLKPLERIKVRISEMVKGNLKSDFYDASRDEIGSMANAMFEFQTKLRQIVNQTQNVSTELTNTSSEIYESMLTLSDAAQN
QAASSEEISASIEEITAGIESVAQRTETQSFTLASLMKKMTELNHAVSEIDKKFQIADVRVEEITKDAKKGESSLGEMKL
SMDKIYQSSSEMTNVVEIIHNISEQINLLALNAAIEAARAGASGRGFAVVADEISKLADKTAKSIDDIEELIKQNEVEIN
QGQEKIDQSISILSETITGVNSINQMTKEIRTVVQKQIETNEEVNEGVTQIRELSEMIREATEEQKTAMMEISRSIAEIN
NHAQTTAISSDGTKSNSQNMNQLTESLRKEINYFHV
>Mature_836_residues
MDIRKMIKFIIFGLEGFNYLIGFPILLSYIYFFTQWTTEELQIILISTAIIVVFLLSFCITFYWIRFSSVYRIFNGTATN
KDNHKAYFWLDHLEKVSMIDIIIRYSVGYLFVLVALLVFQKSINFVLLSELAIGLGMTVAFTILFQSIFIGYVETKFNTK
GILLSIRLDKNSRINTRRLSRNLGFQTVLAFLAAILLLFIINYRMNFKQELDLVNTTMQQSVMDSESLMRLTLVDFRDKL
TISIFTENKLKDQIVKRNLNGIRNVLNEIQLRSTNHAVEALFYYKPEDGIFISTNEYDKSKTGGIFYIEDGDLARQGPLR
HTSIRSRISGDIVSPYTLPVYENNQFQGYVGGFLNIGKLSSFILGNLKIGNSGKVGFFDGDGTIVYFTDKKEIGNNAKTM
LVFDTPYQSKEALGFVDSTEDGSQKRIFFVKNPEFNYIIYCIFENAELYEKTLTSLLMTLGISILVVLMIGIVTVLVIES
KLKPLERIKVRISEMVKGNLKSDFYDASRDEIGSMANAMFEFQTKLRQIVNQTQNVSTELTNTSSEIYESMLTLSDAAQN
QAASSEEISASIEEITAGIESVAQRTETQSFTLASLMKKMTELNHAVSEIDKKFQIADVRVEEITKDAKKGESSLGEMKL
SMDKIYQSSSEMTNVVEIIHNISEQINLLALNAAIEAARAGASGRGFAVVADEISKLADKTAKSIDDIEELIKQNEVEIN
QGQEKIDQSISILSETITGVNSINQMTKEIRTVVQKQIETNEEVNEGVTQIRELSEMIREATEEQKTAMMEISRSIAEIN
NHAQTTAISSDGTKSNSQNMNQLTESLRKEINYFHV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=334, Percent_Identity=28.4431137724551, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI1788194, Length=334, Percent_Identity=27.2455089820359, Blast_Score=116, Evalue=5e-27,
Organism=Escherichia coli, GI2367378, Length=374, Percent_Identity=25.4010695187166, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788195, Length=299, Percent_Identity=27.0903010033445, Blast_Score=106, Evalue=5e-24,
Organism=Escherichia coli, GI1789453, Length=330, Percent_Identity=23.3333333333333, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 94548; Mature: 94548

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRKMIKFIIFGLEGFNYLIGFPILLSYIYFFTQWTTEELQIILISTAIIVVFLLSFCI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TFYWIRFSSVYRIFNGTATNKDNHKAYFWLDHLEKVSMIDIIIRYSVGYLFVLVALLVFQ
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSINFVLLSELAIGLGMTVAFTILFQSIFIGYVETKFNTKGILLSIRLDKNSRINTRRLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCHHHHHH
RNLGFQTVLAFLAAILLLFIINYRMNFKQELDLVNTTMQQSVMDSESLMRLTLVDFRDKL
HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCE
TISIFTENKLKDQIVKRNLNGIRNVLNEIQLRSTNHAVEALFYYKPEDGIFISTNEYDKS
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEEECCCCCCC
KTGGIFYIEDGDLARQGPLRHTSIRSRISGDIVSPYTLPVYENNQFQGYVGGFLNIGKLS
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCHHHHHHHH
SFILGNLKIGNSGKVGFFDGDGTIVYFTDKKEIGNNAKTMLVFDTPYQSKEALGFVDSTE
HHHHCCEEECCCCCEEEEECCCEEEEEECHHHHCCCCCEEEEEECCCCCCHHCCCCCCCC
DGSQKRIFFVKNPEFNYIIYCIFENAELYEKTLTSLLMTLGISILVVLMIGIVTVLVIES
CCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKPLERIKVRISEMVKGNLKSDFYDASRDEIGSMANAMFEFQTKLRQIVNQTQNVSTEL
HCCHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TNTSSEIYESMLTLSDAAQNQAASSEEISASIEEITAGIESVAQRTETQSFTLASLMKKM
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TELNHAVSEIDKKFQIADVRVEEITKDAKKGESSLGEMKLSMDKIYQSSSEMTNVVEIIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
NISEQINLLALNAAIEAARAGASGRGFAVVADEISKLADKTAKSIDDIEELIKQNEVEIN
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGQEKIDQSISILSETITGVNSINQMTKEIRTVVQKQIETNEEVNEGVTQIRELSEMIRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ATEEQKTAMMEISRSIAEINNHAQTTAISSDGTKSNSQNMNQLTESLRKEINYFHV
HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIRKMIKFIIFGLEGFNYLIGFPILLSYIYFFTQWTTEELQIILISTAIIVVFLLSFCI
CCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
TFYWIRFSSVYRIFNGTATNKDNHKAYFWLDHLEKVSMIDIIIRYSVGYLFVLVALLVFQ
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSINFVLLSELAIGLGMTVAFTILFQSIFIGYVETKFNTKGILLSIRLDKNSRINTRRLS
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEEECCCCCCHHHHHH
RNLGFQTVLAFLAAILLLFIINYRMNFKQELDLVNTTMQQSVMDSESLMRLTLVDFRDKL
HCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCE
TISIFTENKLKDQIVKRNLNGIRNVLNEIQLRSTNHAVEALFYYKPEDGIFISTNEYDKS
EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCEEEECCCCCCC
KTGGIFYIEDGDLARQGPLRHTSIRSRISGDIVSPYTLPVYENNQFQGYVGGFLNIGKLS
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHCCHHHHHHHH
SFILGNLKIGNSGKVGFFDGDGTIVYFTDKKEIGNNAKTMLVFDTPYQSKEALGFVDSTE
HHHHCCEEECCCCCEEEEECCCEEEEEECHHHHCCCCCEEEEEECCCCCCHHCCCCCCCC
DGSQKRIFFVKNPEFNYIIYCIFENAELYEKTLTSLLMTLGISILVVLMIGIVTVLVIES
CCCCCEEEEEECCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLKPLERIKVRISEMVKGNLKSDFYDASRDEIGSMANAMFEFQTKLRQIVNQTQNVSTEL
HCCHHHHHHHHHHHHHHCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
TNTSSEIYESMLTLSDAAQNQAASSEEISASIEEITAGIESVAQRTETQSFTLASLMKKM
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
TELNHAVSEIDKKFQIADVRVEEITKDAKKGESSLGEMKLSMDKIYQSSSEMTNVVEIIH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
NISEQINLLALNAAIEAARAGASGRGFAVVADEISKLADKTAKSIDDIEELIKQNEVEIN
HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGQEKIDQSISILSETITGVNSINQMTKEIRTVVQKQIETNEEVNEGVTQIRELSEMIRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ATEEQKTAMMEISRSIAEINNHAQTTAISSDGTKSNSQNMNQLTESLRKEINYFHV
HHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA