| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is hisZ [H]
Identifier: 183221318
GI number: 183221318
Start: 2022503
End: 2023549
Strand: Reverse
Name: hisZ [H]
Synonym: LEPBI_I1935
Alternate gene names: 183221318
Gene position: 2023549-2022503 (Counterclockwise)
Preceding gene: 183221320
Following gene: 183221317
Centisome position: 56.21
GC content: 36.96
Gene sequence:
>1047_bases TTGGGTGATCGAGATCCCGGTATGAATCATAAAAACAAACCAATTTCCTCGGAACAGAAATGGATACCCGATGGATTTCA TTTTTTAGGTCCGGAAGAAAGTAAAAACCGGCGAAATTTACTACAATCGTTTTCAGAACTTTTTGAAAAAGAAGGGTATT CTGAAATCACCTTACCCAGCTTCGATTATTCCAATTCGTTTCGTTCTCAATTACAGGATGGTTTGGAAAGTTTACTCGTC GCCAAAGATTGGGATGGGAATGAACTTTCGCCTGGTGTGGATTTAACACTCCAAGTGGTAAAAGGGATGGCGGCAAGGTC TCATTGGGAAGAAAACCAAAACGTCTATTACTTTGCCAAAAAAATTAGAGATCATAAAAAACGGAACGCATCACGGCGAG AAGTCCTCCAGGTAGGTGTGGAGAGTTTGGGAAATAGTGATACAAATCATTTGATTTCGCAAATTAAAATTCTAAAAAAA CTTTGGGACAATACATTGCCCAATAAAACCTTTACTCTCGTATTTGGGCATTCTTCCTTTTTTCGTACGATTTTGGAAAT CCTTGGTTGGAACGAAGAACAAACAAATGTTCTACGACAGTTTTTATACACTAAAAACTTACCAGAACTAGTTTCTTTGG CTGCTCGGGAGAATACTTCTGAGACTCATATGCAGATCATCCAATTATTACTAAAACCGATCCTATCTTCGGAAATGGGT GTTTTTAAAAAAACATTAGAAACTGTTTTATCAAAAGATGAATTATTAAAAGTAAAACATGATTTGGAATCCATTACTTC CTTTTTCGAAGTTTGGAACAAAGAAATGAAAGGGATTTTTTGCATCTTTGATCCTGCTCTCGTCCGAGATCTCTCGTATT ACACTGGTTTTATGTTCCAGGGATATGTGGAACAAGATCCGGAACCTGTGTTTGCGGGTGGTGTTTATAATGATTTATAT GCAAGTTTTACTGGAATTCAAAAGGATGCATGTGGTTTTGCACTGCATTTGGATGCAATCGAAGTTATGTTAAATAAGGA AAAATGA
Upstream 100 bases:
>100_bases TATCCCTCTAAACCGACATCAGCGTACTGAAAAGTTTCGATTTGTCTATTCGATTTTTACAATTGATTGCGTAAATCTAG GATTTCTCTAAACTGACTTC
Downstream 100 bases:
>100_bases GGGATTTATGCCTGCAAATTTAGTCGTTGGAGCCCAGTGGGGTGATGAAGGAAAGGCAAAAGTAATTGATTACCTTTCAA AAGATACAGATATCATTGTA
Product: ATP phosphoribosyltransferase regulatory subunit
Products: AMP; diphosphate; L-histidyl-tRNA(His)
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MGDRDPGMNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPSFDYSNSFRSQLQDGLESLLV AKDWDGNELSPGVDLTLQVVKGMAARSHWEENQNVYYFAKKIRDHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKK LWDNTLPNKTFTLVFGHSSFFRTILEILGWNEEQTNVLRQFLYTKNLPELVSLAARENTSETHMQIIQLLLKPILSSEMG VFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIFDPALVRDLSYYTGFMFQGYVEQDPEPVFAGGVYNDLY ASFTGIQKDACGFALHLDAIEVMLNKEK
Sequences:
>Translated_348_residues MGDRDPGMNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPSFDYSNSFRSQLQDGLESLLV AKDWDGNELSPGVDLTLQVVKGMAARSHWEENQNVYYFAKKIRDHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKK LWDNTLPNKTFTLVFGHSSFFRTILEILGWNEEQTNVLRQFLYTKNLPELVSLAARENTSETHMQIIQLLLKPILSSEMG VFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIFDPALVRDLSYYTGFMFQGYVEQDPEPVFAGGVYNDLY ASFTGIQKDACGFALHLDAIEVMLNKEK >Mature_347_residues GDRDPGMNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPSFDYSNSFRSQLQDGLESLLVA KDWDGNELSPGVDLTLQVVKGMAARSHWEENQNVYYFAKKIRDHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKKL WDNTLPNKTFTLVFGHSSFFRTILEILGWNEEQTNVLRQFLYTKNLPELVSLAARENTSETHMQIIQLLLKPILSSEMGV FKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIFDPALVRDLSYYTGFMFQGYVEQDPEPVFAGGVYNDLYA SFTGIQKDACGFALHLDAIEVMLNKEK
Specific function: Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine [H]
COG id: COG0124
COG function: function code J; Histidyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. HisZ subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004516 [H]
Pfam domain/function: NA
EC number: 6.1.1.21
Molecular weight: Translated: 40011; Mature: 39880
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRDPGMNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC FDYSNSFRSQLQDGLESLLVAKDWDGNELSPGVDLTLQVVKGMAARSHWEENQNVYYFAK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIRDHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKKLWDNTLPNKTFTLVFGHSSF HHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH FRTILEILGWNEEQTNVLRQFLYTKNLPELVSLAARENTSETHMQIIQLLLKPILSSEMG HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIFDPALVRDLSYYTGFMFQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHC GYVEQDPEPVFAGGVYNDLYASFTGIQKDACGFALHLDAIEVMLNKEK CCCCCCCCCEEECCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GDRDPGMNHKNKPISSEQKWIPDGFHFLGPEESKNRRNLLQSFSELFEKEGYSEITLPS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCC FDYSNSFRSQLQDGLESLLVAKDWDGNELSPGVDLTLQVVKGMAARSHWEENQNVYYFAK CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH KIRDHKKRNASRREVLQVGVESLGNSDTNHLISQIKILKKLWDNTLPNKTFTLVFGHSSF HHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHH FRTILEILGWNEEQTNVLRQFLYTKNLPELVSLAARENTSETHMQIIQLLLKPILSSEMG HHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH VFKKTLETVLSKDELLKVKHDLESITSFFEVWNKEMKGIFCIFDPALVRDLSYYTGFMFQ HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHC GYVEQDPEPVFAGGVYNDLYASFTGIQKDACGFALHLDAIEVMLNKEK CCCCCCCCCEEECCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine; tRNA(His)
Specific reaction: ATP + L-histidine + tRNA(His) = AMP + diphosphate + L-histidyl-tRNA(His)
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA