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The map label for this gene is yadH [H]

Identifier: 183221289

GI number: 183221289

Start: 1998467

End: 1999237

Strand: Direct

Name: yadH [H]

Synonym: LEPBI_I1906

Alternate gene names: 183221289

Gene position: 1998467-1999237 (Clockwise)

Preceding gene: 183221288

Following gene: 183221290

Centisome position: 55.52

GC content: 35.02

Gene sequence:

>771_bases
ATGTGGAAACAAAATTTTACAGCACTTCAGACCATCGTTCGACGAGAATGGATTCGGATCATTCGTATTTGGGTCCAAAC
TTTAATTCCACCAGTGATTACAATGGCATTGTATTTTCTTATTTTTGGTGAGCTTGTCGGCCGCCAGATTGGCAAAATTG
GAGACTTTACCTATATTGAGTTTATTGTACCAGGTCTCATCATGATGAGTGTGATTACAAATTCGTATAACAATGTGGTT
TCTTCTTTTTTTTCCAGTAAATTCCAAAAGAACATTGAAGAACTTTTGGTTTCCCCCACTTCACCTTATACAATTGTTCT
TGGATATACATTTGGTGGAGTGGTTCGTGGTTTATTTGTAGGAATCCTTGTCACTCTCACATCTTTGTTTTTTACAAATC
TACAATTCCAACATCCGTTTATCATCCTCCTCACAGTCATGTTAACCTCCATACTATTTTCGTTAGGTGGTTTTTTTAAT
GCCTTGTTTGCGAAAAAATTTGATGATGTGACAATCATTCCCACTTTCATCCTCACACCTCTCACCTACCTTGGTGGAGT
ATTTTATTCGGTAAAAAATCTACCAGAGTTTTGGCAGACCATCTCCTATTTGAATCCAATTCTTTATATGGTAAACTTAT
TCCGTTATGGTTTTATTGGGATTACTGATGTGAATTTATATTTTTCCCTAGGATTTATCCTCTTTCTTTCTATTGTCATC
TTTTTACTCAATGTTAGGTTAATGAAAATTGGTTATGGAATTAGAAACTAA

Upstream 100 bases:

>100_bases
TTATAGAACTAACCAAACACAAAATGGAAGTTTTGAGTTTAAGGAATAAATCCAATCGTTTGGAAGAATTATTTTTGTCA
CTAACCGGGAAACACTAATT

Downstream 100 bases:

>100_bases
ACAAACTCGAAAAAATAGAATGGAAGAAGTTTTACGGGAAACCTTCCAACCATTGGAACTGATAGTTCTGGATGTTTCCT
TGGAGCATGCCGGTCACCCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MWKQNFTALQTIVRREWIRIIRIWVQTLIPPVITMALYFLIFGELVGRQIGKIGDFTYIEFIVPGLIMMSVITNSYNNVV
SSFFSSKFQKNIEELLVSPTSPYTIVLGYTFGGVVRGLFVGILVTLTSLFFTNLQFQHPFIILLTVMLTSILFSLGGFFN
ALFAKKFDDVTIIPTFILTPLTYLGGVFYSVKNLPEFWQTISYLNPILYMVNLFRYGFIGITDVNLYFSLGFILFLSIVI
FLLNVRLMKIGYGIRN

Sequences:

>Translated_256_residues
MWKQNFTALQTIVRREWIRIIRIWVQTLIPPVITMALYFLIFGELVGRQIGKIGDFTYIEFIVPGLIMMSVITNSYNNVV
SSFFSSKFQKNIEELLVSPTSPYTIVLGYTFGGVVRGLFVGILVTLTSLFFTNLQFQHPFIILLTVMLTSILFSLGGFFN
ALFAKKFDDVTIIPTFILTPLTYLGGVFYSVKNLPEFWQTISYLNPILYMVNLFRYGFIGITDVNLYFSLGFILFLSIVI
FLLNVRLMKIGYGIRN
>Mature_256_residues
MWKQNFTALQTIVRREWIRIIRIWVQTLIPPVITMALYFLIFGELVGRQIGKIGDFTYIEFIVPGLIMMSVITNSYNNVV
SSFFSSKFQKNIEELLVSPTSPYTIVLGYTFGGVVRGLFVGILVTLTSLFFTNLQFQHPFIILLTVMLTSILFSLGGFFN
ALFAKKFDDVTIIPTFILTPLTYLGGVFYSVKNLPEFWQTISYLNPILYMVNLFRYGFIGITDVNLYFSLGFILFLSIVI
FLLNVRLMKIGYGIRN

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=251, Percent_Identity=56.9721115537849, Blast_Score=290, Evalue=8e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29390; Mature: 29390

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS51012 ABC_TM2 ; PS00284 SERPIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]