| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221248
Identifier: 183221248
GI number: 183221248
Start: 1954581
End: 1955990
Strand: Direct
Name: 183221248
Synonym: LEPBI_I1864
Alternate gene names: NA
Gene position: 1954581-1955990 (Clockwise)
Preceding gene: 183221246
Following gene: 183221249
Centisome position: 54.3
GC content: 37.38
Gene sequence:
>1410_bases GTGAACTGGCGCTTTAAAATTCAATTCGGAATTGTTTTTTCACTTTTCTTTCTCAGTTCCACATTACGAGCTAAAATTCC CAATTCGTTTACAGAGGATACCAAATCGGAGTATTCTCAATTTTGGTTTTTGTACGAAAAGGAATCTCGCGGTCGCCAAA ACTTTTTTGCCGTTCGACCGTTTTATATGAGCTTTTCTGACAAGACCTATGCCTTTCGTTTCAGAAGTTACCTCTCTCCG ATTTATTACAAAGAAGAAACCAATTATTGGTACACTTGGTCTTCCCTTTTTTTCTTCAGTGGAACAGGATTCAAACATGA GGAAGGTGACGAAGATGAAGACATCCTTCTCACCCCACTCTTTTTATGGGGCAAAGGGGAATCCCAAAGAGAGAACTATT ATAGTGTCTTTCCCTTTTATGGAAAAATTCGAAACAAACTATCCTACCAAGAATTGAATTATGTGATGTTTCCTATTTAT TCCGAATGGAAATACAAAACCTATCATGCCAAATCCATCGTTTGGCCTCTTGTGATGTGGGGGAGTTCCGAAACTAGAAA TGACATCCGTATCTTTCCTTTTTATTCCAAGAAGGAACATGAAGGGAAATACAGACGGTCTTCAATTCTTTGGCCTTTTT TCCAATGGGGAGAAGAACGTTTGGATAAAAAAGAACCCACCTCCTATCGTATCTTTTTCCCATTTTACAATCAAAAGGAT TCCGCCGATGGGAATATGAAAAGCCGCGCCTTCCTTTGGTTTCCTCTCATCAACTCACTATTTTCCTATGGATATGATAA AAAAACAGGCCAAACCAATTATACTGCCATTTTCATTTTATTCCAATACACAACCTCTACCAAAAAAGATACGGAAAAAC TTGTATTTTTTCCCTTTTATGGATATTCTTATTTTGCAAACAAAGAAGCTGAGTTCATCACACCATTTTACATCCGTTTG TCGCAAAATACCTCTCATCTAAAGTCAACATCACATTTTTTATTACCATTTTATTCTCATATGAAAAATGAATATGTACA AACGGGAAGAGAAGATTATTATTGGAAACTTTGGCCACTGTTTCGGTATCATAAAGATGTGGAAGGGAATTTTGGATGGA ATACAATTGCCATCATCCCTGTGCGATTTGAGGTGATGGAGGATGTTTGGGAACCAATTTTTTCGATCATTGAATACAAA CGTTCGTCTAATGGAGAAAAACGATTGCATCTCATCACAAGACTTTACACTCACCGTTGGACTGAAAACGAAACCCATAT CCACATCCCCATCCTTATGGAATATTCAAAATCACAAACAGGATTCCGATACGAGTTCGCCTATGGTCTTTTTGGCATTG ACACAAGAGAAGAAACAAACAAATACAAATTCTTTTGGTGGGAAGTATGA
Upstream 100 bases:
>100_bases ATATGCTCTCCAGAGATGCCTCCGAAAAGTAGAGCTATTTTGATTTTTGACATGAAATCACTTGATTCCTTTTCATGAAA GTGAACGATAATGAAATTAC
Downstream 100 bases:
>100_bases TCCGTCTCTATAGAAAAACCATTGAACCACTATTGTATGCCATTGGGTATACGGTATTACTGCTCTTTCGAGCGATTGGC CAGTCCCACCAATTGTATTT
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MNWRFKIQFGIVFSLFFLSSTLRAKIPNSFTEDTKSEYSQFWFLYEKESRGRQNFFAVRPFYMSFSDKTYAFRFRSYLSP IYYKEETNYWYTWSSLFFFSGTGFKHEEGDEDEDILLTPLFLWGKGESQRENYYSVFPFYGKIRNKLSYQELNYVMFPIY SEWKYKTYHAKSIVWPLVMWGSSETRNDIRIFPFYSKKEHEGKYRRSSILWPFFQWGEERLDKKEPTSYRIFFPFYNQKD SADGNMKSRAFLWFPLINSLFSYGYDKKTGQTNYTAIFILFQYTTSTKKDTEKLVFFPFYGYSYFANKEAEFITPFYIRL SQNTSHLKSTSHFLLPFYSHMKNEYVQTGREDYYWKLWPLFRYHKDVEGNFGWNTIAIIPVRFEVMEDVWEPIFSIIEYK RSSNGEKRLHLITRLYTHRWTENETHIHIPILMEYSKSQTGFRYEFAYGLFGIDTREETNKYKFFWWEV
Sequences:
>Translated_469_residues MNWRFKIQFGIVFSLFFLSSTLRAKIPNSFTEDTKSEYSQFWFLYEKESRGRQNFFAVRPFYMSFSDKTYAFRFRSYLSP IYYKEETNYWYTWSSLFFFSGTGFKHEEGDEDEDILLTPLFLWGKGESQRENYYSVFPFYGKIRNKLSYQELNYVMFPIY SEWKYKTYHAKSIVWPLVMWGSSETRNDIRIFPFYSKKEHEGKYRRSSILWPFFQWGEERLDKKEPTSYRIFFPFYNQKD SADGNMKSRAFLWFPLINSLFSYGYDKKTGQTNYTAIFILFQYTTSTKKDTEKLVFFPFYGYSYFANKEAEFITPFYIRL SQNTSHLKSTSHFLLPFYSHMKNEYVQTGREDYYWKLWPLFRYHKDVEGNFGWNTIAIIPVRFEVMEDVWEPIFSIIEYK RSSNGEKRLHLITRLYTHRWTENETHIHIPILMEYSKSQTGFRYEFAYGLFGIDTREETNKYKFFWWEV >Mature_469_residues MNWRFKIQFGIVFSLFFLSSTLRAKIPNSFTEDTKSEYSQFWFLYEKESRGRQNFFAVRPFYMSFSDKTYAFRFRSYLSP IYYKEETNYWYTWSSLFFFSGTGFKHEEGDEDEDILLTPLFLWGKGESQRENYYSVFPFYGKIRNKLSYQELNYVMFPIY SEWKYKTYHAKSIVWPLVMWGSSETRNDIRIFPFYSKKEHEGKYRRSSILWPFFQWGEERLDKKEPTSYRIFFPFYNQKD SADGNMKSRAFLWFPLINSLFSYGYDKKTGQTNYTAIFILFQYTTSTKKDTEKLVFFPFYGYSYFANKEAEFITPFYIRL SQNTSHLKSTSHFLLPFYSHMKNEYVQTGREDYYWKLWPLFRYHKDVEGNFGWNTIAIIPVRFEVMEDVWEPIFSIIEYK RSSNGEKRLHLITRLYTHRWTENETHIHIPILMEYSKSQTGFRYEFAYGLFGIDTREETNKYKFFWWEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57411; Mature: 57411
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWRFKIQFGIVFSLFFLSSTLRAKIPNSFTEDTKSEYSQFWFLYEKESRGRQNFFAVRP CCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCEEEEEE FYMSFSDKTYAFRFRSYLSPIYYKEETNYWYTWSSLFFFSGTGFKHEEGDEDEDILLTPL EEEECCCCEEEEEHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEE FLWGKGESQRENYYSVFPFYGKIRNKLSYQELNYVMFPIYSEWKYKTYHAKSIVWPLVMW EEECCCCCCCCCEEEEECCHHHHHCCCCHHHCCEEEEEEECCCEEEEEECCCEEEEEEEE GSSETRNDIRIFPFYSKKEHEGKYRRSSILWPFFQWGEERLDKKEPTSYRIFFPFYNQKD CCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCC SADGNMKSRAFLWFPLINSLFSYGYDKKTGQTNYTAIFILFQYTTSTKKDTEKLVFFPFY CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC GYSYFANKEAEFITPFYIRLSQNTSHLKSTSHFLLPFYSHMKNEYVQTGREDYYWKLWPL CEEEECCCCCCEECEEEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEH FRYHKDVEGNFGWNTIAIIPVRFEVMEDVWEPIFSIIEYKRSSNGEKRLHLITRLYTHRW HHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC TENETHIHIPILMEYSKSQTGFRYEFAYGLFGIDTREETNKYKFFWWEV CCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEC >Mature Secondary Structure MNWRFKIQFGIVFSLFFLSSTLRAKIPNSFTEDTKSEYSQFWFLYEKESRGRQNFFAVRP CCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEEECCCCCCCCEEEEEE FYMSFSDKTYAFRFRSYLSPIYYKEETNYWYTWSSLFFFSGTGFKHEEGDEDEDILLTPL EEEECCCCEEEEEHHHHCCCEEEEECCCEEEEEEEEEEEECCCCCCCCCCCCCCEEEEEE FLWGKGESQRENYYSVFPFYGKIRNKLSYQELNYVMFPIYSEWKYKTYHAKSIVWPLVMW EEECCCCCCCCCEEEEECCHHHHHCCCCHHHCCEEEEEEECCCEEEEEECCCEEEEEEEE GSSETRNDIRIFPFYSKKEHEGKYRRSSILWPFFQWGEERLDKKEPTSYRIFFPFYNQKD CCCCCCCCEEEEEECCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCEEEEEEECCCCC SADGNMKSRAFLWFPLINSLFSYGYDKKTGQTNYTAIFILFQYTTSTKKDTEKLVFFPFY CCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEC GYSYFANKEAEFITPFYIRLSQNTSHLKSTSHFLLPFYSHMKNEYVQTGREDYYWKLWPL CEEEECCCCCCEECEEEEEECCCCHHHHCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEH FRYHKDVEGNFGWNTIAIIPVRFEVMEDVWEPIFSIIEYKRSSNGEKRLHLITRLYTHRW HHHCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC TENETHIHIPILMEYSKSQTGFRYEFAYGLFGIDTREETNKYKFFWWEV CCCCCEEEEEEEEEECCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA