| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221242
Identifier: 183221242
GI number: 183221242
Start: 1949088
End: 1949528
Strand: Direct
Name: 183221242
Synonym: LEPBI_I1858
Alternate gene names: NA
Gene position: 1949088-1949528 (Clockwise)
Preceding gene: 183221236
Following gene: 183221243
Centisome position: 54.15
GC content: 37.64
Gene sequence:
>441_bases TTGCTTTCCCTAATGCTTCGATTTTTGATCCTTTCCATTCTCGTCCTTTGGCAATGTAGCCCGAACAGGCAAACAGAAAC CTATCGTTTCGACCAAATCATCGTCACAAAATTTCCGACAAACCCTCCTCCTGCCTTCCCCCAATCCTTTTTTCCAGAAA AAGCAAATTTTTTGCAGTCTAGTGAATTCAAAACAAGCCACATACATACGAAGGAAGCATTTTTACTCTTAGAAACTTCT GAAACTTGGGAAGAAATCCAGAAACGAATCGACTTTCGTGTCAACCAAGGGGACTGGAAACTAGTAGAAAAAAATACAAA CGATTCTGAAGTCTCTTATCTACTAGAAGGGTTTATCAAAAAATCATTATCGATTTACCTTTCTCGCAGTGGAGAAACAA ACCAAATACGGTTTTACTTTAAAAAACATTCTACGTATTAA
Upstream 100 bases:
>100_bases CAATGGGAAGGAATCCAACACAACGAGATGCTAAAAACCATTCTCCGGTTAGGCAACAAAGATTTTAAAAAATGAATGGA AGGAATCAATACTAGGACAT
Downstream 100 bases:
>100_bases ACATGAACTGGATCACAAATAAAAACGAAACCATCGTCTATATATTGTTAGCAGGAATTTTTCTTGCGACATGTTTTACT TTATTTTTTGTTTTTAAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLSLMLRFLILSILVLWQCSPNRQTETYRFDQIIVTKFPTNPPPAFPQSFFPEKANFLQSSEFKTSHIHTKEAFLLLETS ETWEEIQKRIDFRVNQGDWKLVEKNTNDSEVSYLLEGFIKKSLSIYLSRSGETNQIRFYFKKHSTY
Sequences:
>Translated_146_residues MLSLMLRFLILSILVLWQCSPNRQTETYRFDQIIVTKFPTNPPPAFPQSFFPEKANFLQSSEFKTSHIHTKEAFLLLETS ETWEEIQKRIDFRVNQGDWKLVEKNTNDSEVSYLLEGFIKKSLSIYLSRSGETNQIRFYFKKHSTY >Mature_146_residues MLSLMLRFLILSILVLWQCSPNRQTETYRFDQIIVTKFPTNPPPAFPQSFFPEKANFLQSSEFKTSHIHTKEAFLLLETS ETWEEIQKRIDFRVNQGDWKLVEKNTNDSEVSYLLEGFIKKSLSIYLSRSGETNQIRFYFKKHSTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17340; Mature: 17340
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSLMLRFLILSILVLWQCSPNRQTETYRFDQIIVTKFPTNPPPAFPQSFFPEKANFLQS CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHC SEFKTSHIHTKEAFLLLETSETWEEIQKRIDFRVNQGDWKLVEKNTNDSEVSYLLEGFIK CCCCCHHCCCCCEEEEEECCHHHHHHHHHHCEEECCCCEEEEECCCCHHHHHHHHHHHHH KSLSIYLSRSGETNQIRFYFKKHSTY HHHEEEEECCCCCCEEEEEEEECCCC >Mature Secondary Structure MLSLMLRFLILSILVLWQCSPNRQTETYRFDQIIVTKFPTNPPPAFPQSFFPEKANFLQS CHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHC SEFKTSHIHTKEAFLLLETSETWEEIQKRIDFRVNQGDWKLVEKNTNDSEVSYLLEGFIK CCCCCHHCCCCCEEEEEECCHHHHHHHHHHCEEECCCCEEEEECCCCHHHHHHHHHHHHH KSLSIYLSRSGETNQIRFYFKKHSTY HHHEEEEECCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA