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The map label for this gene is ugpQ [H]

Identifier: 183221228

GI number: 183221228

Start: 1934077

End: 1934841

Strand: Direct

Name: ugpQ [H]

Synonym: LEPBI_I1842

Alternate gene names: 183221228

Gene position: 1934077-1934841 (Clockwise)

Preceding gene: 183221227

Following gene: 183221230

Centisome position: 53.73

GC content: 43.53

Gene sequence:

>765_bases
ATGTGGAAACCACGCACCGAAAGGTTACAAACAATTCTTGGGAAAGAACCTGCAAACATAGGCCATCGGGGTGCTCGGGG
CCTTGCACCTGAAAATACCCTTGTCTCTTTCCTTGTAGGGTCAGAATTCACACATCTCTTCGAATTGGATACGATGTTAT
GCGGCTCGGGAGAACTTGTGGTGATCCATGATTTTACCGTAGACCGAACCACCGATGGTACAGGAAAAGTTTCGGAATTC
AGCTATCGTAAGTTAGCGGAACTGGATGCCGGTGGATTCTTTGATGAAAGTTTTGAAGGAGAACAAATTCCGACTCTTTC
CCAAGTGGTCCAAACCCTACCCGAAACGAGTGTATTTGATATTGAACTCAAAAGTGAAGGCAAAACAGAAGAGAGAGTGG
CACTAGCCAAAGCCGTTGTCAAACTGATTCGGAAATATCAATTAATTGATCGTGTTTGGGTGAGTAGTTTTGATTGGGAA
CTTGTGGAGCTTGTTAGGCAAGAAGAAACTGAAGTGCTCCGAGGACTCCTAATCGAAAAAGGAGATTCGCTAAACTCTCG
TTACATGGAATATGAACCTGACTTAATTTTACCCCATGTTTCTCACTGTACCAAGGAATTTGTAACCCAATGTCAATCAG
AGTCCCTACTTGTCATCCCTTACACTCCGAATGAAGAAGGAGAGTGGAAAACCTTACTTGAGGTAGGAGTATCAGGGCTC
ATCACAGATTTTCCCGATTTACTCGCTGACTATTTAAAGAAGTAA

Upstream 100 bases:

>100_bases
TACATTGATCGTTACTTAGGGGAAAATTTAAAACAACAGATGTTCAAAGAAGCGATGGAAGAAGAAGGATACGAATCCAC
CATCCAACCAGGGTAAAACC

Downstream 100 bases:

>100_bases
ACCCAAACCCAATTTCCCCATGGGTCTTCCCATAAATGGTAACCCTTTGTTTCTAAGGTTGTGACTGGTTTGAATCTTTG
GAAGATCGGATCGTTTTCCT

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MWKPRTERLQTILGKEPANIGHRGARGLAPENTLVSFLVGSEFTHLFELDTMLCGSGELVVIHDFTVDRTTDGTGKVSEF
SYRKLAELDAGGFFDESFEGEQIPTLSQVVQTLPETSVFDIELKSEGKTEERVALAKAVVKLIRKYQLIDRVWVSSFDWE
LVELVRQEETEVLRGLLIEKGDSLNSRYMEYEPDLILPHVSHCTKEFVTQCQSESLLVIPYTPNEEGEWKTLLEVGVSGL
ITDFPDLLADYLKK

Sequences:

>Translated_254_residues
MWKPRTERLQTILGKEPANIGHRGARGLAPENTLVSFLVGSEFTHLFELDTMLCGSGELVVIHDFTVDRTTDGTGKVSEF
SYRKLAELDAGGFFDESFEGEQIPTLSQVVQTLPETSVFDIELKSEGKTEERVALAKAVVKLIRKYQLIDRVWVSSFDWE
LVELVRQEETEVLRGLLIEKGDSLNSRYMEYEPDLILPHVSHCTKEFVTQCQSESLLVIPYTPNEEGEWKTLLEVGVSGL
ITDFPDLLADYLKK
>Mature_254_residues
MWKPRTERLQTILGKEPANIGHRGARGLAPENTLVSFLVGSEFTHLFELDTMLCGSGELVVIHDFTVDRTTDGTGKVSEF
SYRKLAELDAGGFFDESFEGEQIPTLSQVVQTLPETSVFDIELKSEGKTEERVALAKAVVKLIRKYQLIDRVWVSSFDWE
LVELVRQEETEVLRGLLIEKGDSLNSRYMEYEPDLILPHVSHCTKEFVTQCQSESLLVIPYTPNEEGEWKTLLEVGVSGL
ITDFPDLLADYLKK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=180, Percent_Identity=31.6666666666667, Blast_Score=71, Evalue=1e-12,
Organism=Escherichia coli, GI1789858, Length=239, Percent_Identity=30.9623430962343, Blast_Score=107, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI17542344, Length=272, Percent_Identity=23.1617647058824, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 28731; Mature: 28731

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWKPRTERLQTILGKEPANIGHRGARGLAPENTLVSFLVGSEFTHLFELDTMLCGSGELV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEE
VIHDFTVDRTTDGTGKVSEFSYRKLAELDAGGFFDESFEGEQIPTLSQVVQTLPETSVFD
EEEECEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
IELKSEGKTEERVALAKAVVKLIRKYQLIDRVWVSSFDWELVELVRQEETEVLRGLLIEK
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
GDSLNSRYMEYEPDLILPHVSHCTKEFVTQCQSESLLVIPYTPNEEGEWKTLLEVGVSGL
CCCCCCCCEECCCCEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH
ITDFPDLLADYLKK
HHHHHHHHHHHHCC
>Mature Secondary Structure
MWKPRTERLQTILGKEPANIGHRGARGLAPENTLVSFLVGSEFTHLFELDTMLCGSGELV
CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCEE
VIHDFTVDRTTDGTGKVSEFSYRKLAELDAGGFFDESFEGEQIPTLSQVVQTLPETSVFD
EEEECEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
IELKSEGKTEERVALAKAVVKLIRKYQLIDRVWVSSFDWELVELVRQEETEVLRGLLIEK
EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
GDSLNSRYMEYEPDLILPHVSHCTKEFVTQCQSESLLVIPYTPNEEGEWKTLLEVGVSGL
CCCCCCCCEECCCCEECHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHH
ITDFPDLLADYLKK
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]