| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is mgtE [H]
Identifier: 183221218
GI number: 183221218
Start: 1920649
End: 1922052
Strand: Reverse
Name: mgtE [H]
Synonym: LEPBI_I1832
Alternate gene names: 183221218
Gene position: 1922052-1920649 (Counterclockwise)
Preceding gene: 183221222
Following gene: 183221217
Centisome position: 53.4
GC content: 42.02
Gene sequence:
>1404_bases ATGGAAGAAGAAAGAAAGAAAGAGTCAGAATTCCGAATCAAAATCGACCGAGACAGCGATTCTTATGAAGAGTTTGTCGA CCAAATCAAATTTTCCATTGAGGCAAAAGACCACGCAAGCCTTAAGTCCATGCTCGACGGAGCCCACCCTGCGGACGTCG TCACACTCTTTAAGGACTTGGAACGGGAAGAGGAACTTTACCTCTTTCGATTACTCACAAACGAAGACCAAGCATACTCC CTCATCAAAATGGAAGAGGAAACACTCGAGTCCTTTTTAGAAGAACTCTCTGTGGATGAAATTTCCAAAACCCTAAGTCA TATTGAAACCGATGAAACTACTTATTTACTCTCCTATCTACCTAGTGCCAAAAGAGAATTAGTTCTATCTAACTTAAGTA AGGCGGATAGTTTTGAAATCCGATCTCAACTTGGATTCCGCGAATACTCGGCAGGACGACTCATGTCGAAAGACTTTGCC ACCGTTACCATCACGGATAACGTGAGAAAGGGGATCATCAATGTCCGGAAAAAAGCAAAAGAAATCGAAGACATTTATCA AATTTATGTAACAGACGAAGATGGTGTTTTAGAAGGATTTATCCCTTTAAAAGACTTATTCCTCACACCCATCAATACAA AGGTCGCAAAGATCACAAATTTTTCCGTTTTTGCCTTTCATTACGATGTGGACCAAGAGGAAGTTGCCAATACATTCAAA AAATATGATTTAGTGAGTGCGGCAGTCACAGATGATTTAGGTCGGATCATTGGGCGCATCACAGTGGATGATGTTTTAGA AATTGTGGAAGAGGAAGCATCAGAAGATATCCTCCTCATGGCAGGGGTTTCGGAAGATGAACGTTTGTCCACACCCATTT TACAATCGGTCAAACGGCGGATCATTTGGCTGAATGTCAATTTACTCACTGCTTTTGTGAGTTCTTCCGTCGTCGCTTTT TTTGAAGATACCATCTCCCAAATTGTGGTACTTGCGACGCTTATGCCAATTGTGGCAGGGCTTGGTGGCAATGCAGGTAC ACAATCTGTAACAGTTGTCATCCGAAACATTGCAACAGGGGATTTGTCTTTTTCCAATTGGTGGGAAGCCGTCCGAAAAG AGTTTACGATCGGTGTTTTGAATGGTTTGGCTTTAGGGACTGTGACTCTTAGCATGATTTACCTTGTGAAAGGAAACTTA ACTTTAGGTCTCGTTGTAGGCACGGCTATGTTTGTGAATATGATTGTGGCATCCCTTGTGGGTTCCCTTGTCCCCATTGT CCTAAAAGGAATGAAAATTGATCCTGCCATTGCCTCTTCTATCTTTGTGACAGCGACAACTGATGTATGTGGGTTTTTCT TTTTCCTTGGACTTGCCACAGTCTTTGCAAAATATTTGGTTTAG
Upstream 100 bases:
>100_bases AGATTCGTTTTCAAAAATGGAACTCGTGCCGACATAGGATATAGCCTATGGTTCACGTGACATAACCGTCAATTGGAAAA TTCAGGAAATCCGCTGATTT
Downstream 100 bases:
>100_bases GGATTCCCATATTTTCTTTAAAATTCTTGCCAGTGGAGGAAAGCACCAAATACTGATGACCAAATGAAATTTTCGTTTCA CTCCGTCCTTCTTTTCCTCC
Product: putative divalent cation transporter; putative MgtE transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MEEERKKESEFRIKIDRDSDSYEEFVDQIKFSIEAKDHASLKSMLDGAHPADVVTLFKDLEREEELYLFRLLTNEDQAYS LIKMEEETLESFLEELSVDEISKTLSHIETDETTYLLSYLPSAKRELVLSNLSKADSFEIRSQLGFREYSAGRLMSKDFA TVTITDNVRKGIINVRKKAKEIEDIYQIYVTDEDGVLEGFIPLKDLFLTPINTKVAKITNFSVFAFHYDVDQEEVANTFK KYDLVSAAVTDDLGRIIGRITVDDVLEIVEEEASEDILLMAGVSEDERLSTPILQSVKRRIIWLNVNLLTAFVSSSVVAF FEDTISQIVVLATLMPIVAGLGGNAGTQSVTVVIRNIATGDLSFSNWWEAVRKEFTIGVLNGLALGTVTLSMIYLVKGNL TLGLVVGTAMFVNMIVASLVGSLVPIVLKGMKIDPAIASSIFVTATTDVCGFFFFLGLATVFAKYLV
Sequences:
>Translated_467_residues MEEERKKESEFRIKIDRDSDSYEEFVDQIKFSIEAKDHASLKSMLDGAHPADVVTLFKDLEREEELYLFRLLTNEDQAYS LIKMEEETLESFLEELSVDEISKTLSHIETDETTYLLSYLPSAKRELVLSNLSKADSFEIRSQLGFREYSAGRLMSKDFA TVTITDNVRKGIINVRKKAKEIEDIYQIYVTDEDGVLEGFIPLKDLFLTPINTKVAKITNFSVFAFHYDVDQEEVANTFK KYDLVSAAVTDDLGRIIGRITVDDVLEIVEEEASEDILLMAGVSEDERLSTPILQSVKRRIIWLNVNLLTAFVSSSVVAF FEDTISQIVVLATLMPIVAGLGGNAGTQSVTVVIRNIATGDLSFSNWWEAVRKEFTIGVLNGLALGTVTLSMIYLVKGNL TLGLVVGTAMFVNMIVASLVGSLVPIVLKGMKIDPAIASSIFVTATTDVCGFFFFLGLATVFAKYLV >Mature_467_residues MEEERKKESEFRIKIDRDSDSYEEFVDQIKFSIEAKDHASLKSMLDGAHPADVVTLFKDLEREEELYLFRLLTNEDQAYS LIKMEEETLESFLEELSVDEISKTLSHIETDETTYLLSYLPSAKRELVLSNLSKADSFEIRSQLGFREYSAGRLMSKDFA TVTITDNVRKGIINVRKKAKEIEDIYQIYVTDEDGVLEGFIPLKDLFLTPINTKVAKITNFSVFAFHYDVDQEEVANTFK KYDLVSAAVTDDLGRIIGRITVDDVLEIVEEEASEDILLMAGVSEDERLSTPILQSVKRRIIWLNVNLLTAFVSSSVVAF FEDTISQIVVLATLMPIVAGLGGNAGTQSVTVVIRNIATGDLSFSNWWEAVRKEFTIGVLNGLALGTVTLSMIYLVKGNL TLGLVVGTAMFVNMIVASLVGSLVPIVLKGMKIDPAIASSIFVTATTDVCGFFFFLGLATVFAKYLV
Specific function: Acts as a magnesium transporter [H]
COG id: COG2239
COG function: function code P; Mg/Co/Ni transporter MgtE (contains CBS domain)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR006668 - InterPro: IPR006667 - InterPro: IPR006669 [H]
Pfam domain/function: PF00571 CBS; PF01769 MgtE; PF03448 MgtE_N [H]
EC number: NA
Molecular weight: Translated: 52066; Mature: 52066
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEERKKESEFRIKIDRDSDSYEEFVDQIKFSIEAKDHASLKSMLDGAHPADVVTLFKDL CCCHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH EREEELYLFRLLTNEDQAYSLIKMEEETLESFLEELSVDEISKTLSHIETDETTYLLSYL CCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHC PSAKRELVLSNLSKADSFEIRSQLGFREYSAGRLMSKDFATVTITDNVRKGIINVRKKAK CCHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH EIEDIYQIYVTDEDGVLEGFIPLKDLFLTPINTKVAKITNFSVFAFHYDVDQEEVANTFK HHHHHHEEEEECCCCCEECCCCHHHHHCCCCCCHHHEEECEEEEEEEECCCHHHHHHHHH KYDLVSAAVTDDLGRIIGRITVDDVLEIVEEEASEDILLMAGVSEDERLSTPILQSVKRR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHCCCHHHHHHHHE IIWLNVNLLTAFVSSSVVAFFEDTISQIVVLATLMPIVAGLGGNAGTQSVTVVIRNIATG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEHHCCC DLSFSNWWEAVRKEFTIGVLNGLALGTVTLSMIYLVKGNLTLGLVVGTAMFVNMIVASLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH GSLVPIVLKGMKIDPAIASSIFVTATTDVCGFFFFLGLATVFAKYLV HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEEERKKESEFRIKIDRDSDSYEEFVDQIKFSIEAKDHASLKSMLDGAHPADVVTLFKDL CCCHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHH EREEELYLFRLLTNEDQAYSLIKMEEETLESFLEELSVDEISKTLSHIETDETTYLLSYL CCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHC PSAKRELVLSNLSKADSFEIRSQLGFREYSAGRLMSKDFATVTITDNVRKGIINVRKKAK CCHHHHHHHHHCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHH EIEDIYQIYVTDEDGVLEGFIPLKDLFLTPINTKVAKITNFSVFAFHYDVDQEEVANTFK HHHHHHEEEEECCCCCEECCCCHHHHHCCCCCCHHHEEECEEEEEEEECCCHHHHHHHHH KYDLVSAAVTDDLGRIIGRITVDDVLEIVEEEASEDILLMAGVSEDERLSTPILQSVKRR HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCHHCCCHHHHHHHHE IIWLNVNLLTAFVSSSVVAFFEDTISQIVVLATLMPIVAGLGGNAGTQSVTVVIRNIATG EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHEEHHCCC DLSFSNWWEAVRKEFTIGVLNGLALGTVTLSMIYLVKGNLTLGLVVGTAMFVNMIVASLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH GSLVPIVLKGMKIDPAIASSIFVTATTDVCGFFFFLGLATVFAKYLV HHHHHHHHCCCCCCHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12663927 [H]