| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221203
Identifier: 183221203
GI number: 183221203
Start: 1898381
End: 1899511
Strand: Reverse
Name: 183221203
Synonym: LEPBI_I1817
Alternate gene names: NA
Gene position: 1899511-1898381 (Counterclockwise)
Preceding gene: 183221204
Following gene: 183221201
Centisome position: 52.77
GC content: 34.22
Gene sequence:
>1131_bases ATGAAAATCAAATTTCCAATCGTATTGTATCCATTCTTACTTGTTTTGGTTTTATTTTTATTTGATAAAATATTTTTCCT ACCTATCATTGTAGAAAATACATATAGTTGGAAAAAAATTGAACGAAAATTCTATGAATTGAAGGAAGACTTATTCGAAG TTATGTTGGATGTATCCAAAAAAGATCCTTCCAAACAGATCGGACTTATATTAGGTAGTTCTCGTTCTGGTGAATTTGAT TCCGAGATGGTGGAAGAATTTTTCCCAAATACGAACTCCTTTAATTTTGCAGCTCCATTTGGACCTCCTAGTTTCCAAGC CTATTGGTTGGAACGTGTCCTAAAAACTAAATTACCAATCCGTTACGTACTCATTGAAGTTGATCCATTATTGTTTTCCA AATCGTCCATCGATTATTCTTTAAATGGTTCCTATGATAATTTATATATACTGAATCATATTGACTTTTTCCGTAGCAAA ACTGTCGATCCTTGGTCTACAAAAACAACTGGGTTTTCAGTGGATGAAGCTGAAGTTTATTTTTTGAAAAAATTATTTGC TCTCTATAAATATCCATTGGATCCTTCTGCGATCAAAGCAAACAACAAAGAGATTGAGATTGGCTTTTTTCCAGGATTGT CTTCTGGGATTACTGGTAAAGAACACAAACGTGGTTACATTGACAAAATCAAATTGGTCAACCGTGCCAAATTTGGGGCA CTACCGAATGAAATAAAATTTGCGAATATGGATTTGTTTTTAGAGCGTGATGCCGAAGCGATGTACAACCAATACTTACG CGGATCATCCTTATCACCGACGCAAATTTTCTTTTTCAAAAAAATGTTACATCTCCTCGAAGGGACTGGAATTCCAGTGA TTATTTATTTTCCTGCTGTTTCAGAGCCTTTACGTCGTAAGATGCAAACTGATGGATTATTAGAGCGTTTCAATTTGGAA ATTAGAAACCAAGTTTCGTTGGTCTCAAAAGTACCAAATTCTAAGTTTTATGTCATTGATCCAAATGTTGACCCTAATTG GAAATGTAAAGATTTTGTGGATTCTCTCCATTTGAGTGGTGCTTGTTTTCCAAACCTTTTACCAATTCTTTTTCCAAAAT ACCTTCGTTAG
Upstream 100 bases:
>100_bases TTTAGTTTGGTTTTTTTGTTTTTATTCTCATTTGTCATTACGGTTCTGTTAGGTTATTTGGCGCCAGGAGGAACGGAGTT TATTTACTTCCAATTTTAAT
Downstream 100 bases:
>100_bases GTGCGTTGGTTTTTCCTTTTTTGTAGTTGTTTCGGTAGGAAATAAAATCGAAACATCAAATACCCAAGCACACTCATACC TAAGAACAATAGAGAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKIKFPIVLYPFLLVLVLFLFDKIFFLPIIVENTYSWKKIERKFYELKEDLFEVMLDVSKKDPSKQIGLILGSSRSGEFD SEMVEEFFPNTNSFNFAAPFGPPSFQAYWLERVLKTKLPIRYVLIEVDPLLFSKSSIDYSLNGSYDNLYILNHIDFFRSK TVDPWSTKTTGFSVDEAEVYFLKKLFALYKYPLDPSAIKANNKEIEIGFFPGLSSGITGKEHKRGYIDKIKLVNRAKFGA LPNEIKFANMDLFLERDAEAMYNQYLRGSSLSPTQIFFFKKMLHLLEGTGIPVIIYFPAVSEPLRRKMQTDGLLERFNLE IRNQVSLVSKVPNSKFYVIDPNVDPNWKCKDFVDSLHLSGACFPNLLPILFPKYLR
Sequences:
>Translated_376_residues MKIKFPIVLYPFLLVLVLFLFDKIFFLPIIVENTYSWKKIERKFYELKEDLFEVMLDVSKKDPSKQIGLILGSSRSGEFD SEMVEEFFPNTNSFNFAAPFGPPSFQAYWLERVLKTKLPIRYVLIEVDPLLFSKSSIDYSLNGSYDNLYILNHIDFFRSK TVDPWSTKTTGFSVDEAEVYFLKKLFALYKYPLDPSAIKANNKEIEIGFFPGLSSGITGKEHKRGYIDKIKLVNRAKFGA LPNEIKFANMDLFLERDAEAMYNQYLRGSSLSPTQIFFFKKMLHLLEGTGIPVIIYFPAVSEPLRRKMQTDGLLERFNLE IRNQVSLVSKVPNSKFYVIDPNVDPNWKCKDFVDSLHLSGACFPNLLPILFPKYLR >Mature_376_residues MKIKFPIVLYPFLLVLVLFLFDKIFFLPIIVENTYSWKKIERKFYELKEDLFEVMLDVSKKDPSKQIGLILGSSRSGEFD SEMVEEFFPNTNSFNFAAPFGPPSFQAYWLERVLKTKLPIRYVLIEVDPLLFSKSSIDYSLNGSYDNLYILNHIDFFRSK TVDPWSTKTTGFSVDEAEVYFLKKLFALYKYPLDPSAIKANNKEIEIGFFPGLSSGITGKEHKRGYIDKIKLVNRAKFGA LPNEIKFANMDLFLERDAEAMYNQYLRGSSLSPTQIFFFKKMLHLLEGTGIPVIIYFPAVSEPLRRKMQTDGLLERFNLE IRNQVSLVSKVPNSKFYVIDPNVDPNWKCKDFVDSLHLSGACFPNLLPILFPKYLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43586; Mature: 43586
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKFPIVLYPFLLVLVLFLFDKIFFLPIIVENTYSWKKIERKFYELKEDLFEVMLDVSK CEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC KDPSKQIGLILGSSRSGEFDSEMVEEFFPNTNSFNFAAPFGPPSFQAYWLERVLKTKLPI CCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCE RYVLIEVDPLLFSKSSIDYSLNGSYDNLYILNHIDFFRSKTVDPWSTKTTGFSVDEAEVY EEEEEEECHHEEECCCCCEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHHH FLKKLFALYKYPLDPSAIKANNKEIEIGFFPGLSSGITGKEHKRGYIDKIKLVNRAKFGA HHHHHHHHHCCCCCCHHEECCCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCC LPNEIKFANMDLFLERDAEAMYNQYLRGSSLSPTQIFFFKKMLHLLEGTGIPVIIYFPAV CCCCEEEECCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC SEPLRRKMQTDGLLERFNLEIRNQVSLVSKVPNSKFYVIDPNVDPNWKCKDFVDSLHLSG CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCC ACFPNLLPILFPKYLR CCHHHHHHHHHHHHCC >Mature Secondary Structure MKIKFPIVLYPFLLVLVLFLFDKIFFLPIIVENTYSWKKIERKFYELKEDLFEVMLDVSK CEEECHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHCC KDPSKQIGLILGSSRSGEFDSEMVEEFFPNTNSFNFAAPFGPPSFQAYWLERVLKTKLPI CCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHCCCE RYVLIEVDPLLFSKSSIDYSLNGSYDNLYILNHIDFFRSKTVDPWSTKTTGFSVDEAEVY EEEEEEECHHEEECCCCCEEECCCCCCEEEEECHHHHHHCCCCCCCCCCCCCCCCHHHHH FLKKLFALYKYPLDPSAIKANNKEIEIGFFPGLSSGITGKEHKRGYIDKIKLVNRAKFGA HHHHHHHHHCCCCCCHHEECCCCEEEEEECCCCCCCCCCCHHCCCHHHHHHHHHHHHHCC LPNEIKFANMDLFLERDAEAMYNQYLRGSSLSPTQIFFFKKMLHLLEGTGIPVIIYFPAV CCCCEEEECCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCC SEPLRRKMQTDGLLERFNLEIRNQVSLVSKVPNSKFYVIDPNVDPNWKCKDFVDSLHLSG CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCCC ACFPNLLPILFPKYLR CCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA