| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221028
Identifier: 183221028
GI number: 183221028
Start: 1717089
End: 1717760
Strand: Direct
Name: 183221028
Synonym: LEPBI_I1641
Alternate gene names: NA
Gene position: 1717089-1717760 (Clockwise)
Preceding gene: 183221027
Following gene: 183221030
Centisome position: 47.7
GC content: 35.71
Gene sequence:
>672_bases GTGAATCGTTTAGATGGATCCTTAGTTTCTTCCCATGCCGGTGTATTTTACCCTTACCAACACCAAGATTTTTACGCCAT GGATTCCTTGTTTTTATCACCCTTCAAAGAAGAGGAAGTTTGGGATTTTCAATCCCTTTCTCTTGTCCAAATGGGGTTTC TTGGTTTTTTAACCTTACGAGGTTCCATAAGAGAACAATTGGGACTTTCCAAAATGCAAGTGAGAGGTCTCTCCAAACAT TGGCGATCTTATTTGGCGAAGGAAAATTTTTTAGGGAACCAGATTCATTGGGAAACATTAGAATTCATACCCAATTTAGT CGGTGAAAAAAAAGAAGAACAAAACAGTTTTGGGAAAAAAGGCCATTGGATGAATGAATTCCATTGGGAAAAAAAGGATG GGGAAAATACTTCCGTTTTTTTTATCGCCACCAACAAACAAACGGAAGGCGAAATTGCGATCAGTGATTTGATGAAGGAT TTTTTATCATATTCCCAGACCAATCATTATTTAGAAAGAGCCTACATTCGAAAAGAAAATTCAAGTTATCTTTATTTAAA TGCGAAAGAAACCAATCCAAGAGTGTTTTACCGTGAAAACCAAACCAATTTTCCTTCGTTTTTGTTTTTAGTCGCTGAGT TAAAAAATAAACATATCATTCACCCAAATTAA
Upstream 100 bases:
>100_bases ACGCTGGTGACTAGTCAAACTTTCATTTTCTAAGCTTTCCGCCTCGGTTCCGGGGCGGATTTTACTCTTCCCTTTTCCAA ACTCCGTCGATACTTTTTAT
Downstream 100 bases:
>100_bases GACCCATTAACACTTGTTTTAATAGTTCTGCTTTTGTTTCCAAGTGAGTTGTTTCTAAAATGGTTTGTTTGGTTTTAAAG TCGAAATAAATTAATGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MNRLDGSLVSSHAGVFYPYQHQDFYAMDSLFLSPFKEEEVWDFQSLSLVQMGFLGFLTLRGSIREQLGLSKMQVRGLSKH WRSYLAKENFLGNQIHWETLEFIPNLVGEKKEEQNSFGKKGHWMNEFHWEKKDGENTSVFFIATNKQTEGEIAISDLMKD FLSYSQTNHYLERAYIRKENSSYLYLNAKETNPRVFYRENQTNFPSFLFLVAELKNKHIIHPN
Sequences:
>Translated_223_residues MNRLDGSLVSSHAGVFYPYQHQDFYAMDSLFLSPFKEEEVWDFQSLSLVQMGFLGFLTLRGSIREQLGLSKMQVRGLSKH WRSYLAKENFLGNQIHWETLEFIPNLVGEKKEEQNSFGKKGHWMNEFHWEKKDGENTSVFFIATNKQTEGEIAISDLMKD FLSYSQTNHYLERAYIRKENSSYLYLNAKETNPRVFYRENQTNFPSFLFLVAELKNKHIIHPN >Mature_223_residues MNRLDGSLVSSHAGVFYPYQHQDFYAMDSLFLSPFKEEEVWDFQSLSLVQMGFLGFLTLRGSIREQLGLSKMQVRGLSKH WRSYLAKENFLGNQIHWETLEFIPNLVGEKKEEQNSFGKKGHWMNEFHWEKKDGENTSVFFIATNKQTEGEIAISDLMKD FLSYSQTNHYLERAYIRKENSSYLYLNAKETNPRVFYRENQTNFPSFLFLVAELKNKHIIHPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26314; Mature: 26314
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLDGSLVSSHAGVFYPYQHQDFYAMDSLFLSPFKEEEVWDFQSLSLVQMGFLGFLTLR CCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHH GSIREQLGLSKMQVRGLSKHWRSYLAKENFLGNQIHWETLEFIPNLVGEKKEEQNSFGKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC GHWMNEFHWEKKDGENTSVFFIATNKQTEGEIAISDLMKDFLSYSQTNHYLERAYIRKEN CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC SSYLYLNAKETNPRVFYRENQTNFPSFLFLVAELKNKHIIHPN CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNRLDGSLVSSHAGVFYPYQHQDFYAMDSLFLSPFKEEEVWDFQSLSLVQMGFLGFLTLR CCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHH GSIREQLGLSKMQVRGLSKHWRSYLAKENFLGNQIHWETLEFIPNLVGEKKEEQNSFGKK HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCC GHWMNEFHWEKKDGENTSVFFIATNKQTEGEIAISDLMKDFLSYSQTNHYLERAYIRKEN CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEECC SSYLYLNAKETNPRVFYRENQTNFPSFLFLVAELKNKHIIHPN CCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA