| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is flgI [H]
Identifier: 183220922
GI number: 183220922
Start: 1600713
End: 1601891
Strand: Direct
Name: flgI [H]
Synonym: LEPBI_I1535
Alternate gene names: 183220922
Gene position: 1600713-1601891 (Clockwise)
Preceding gene: 183220921
Following gene: 183220923
Centisome position: 44.47
GC content: 44.61
Gene sequence:
>1179_bases GTGAGTAATTTTATGAACCATTTACAAAGTTTGCCCACTCGGAAGGAAAACCTTTCTCTAGTTTCCCTTTTATCGAAACA TAAACTTTCCTCCGCATTTCTTAAATCTTTCATGATCTTCCTACTTTTGATAGGGGGAAACACTCCCATCTTTTCAGTAG AAACTAGACTGAAAGACTTAGTGCGAATGGATGCGGTGCGAGAAAACCAACTCACAGGATTTGGTCTGGTGGTAGGACTG AATGGAACGGGGGATACCAAAAACCCTCTCACAGAAGAAGCCTTACAAAATTATCTCAGTGGTCTTGGCGTGAATACCAA GAAGAACCTAAGGGATGCGAAAAACACAGCATCTGTTCTTATCACCGCCAATGTTCCTGTCAATCTGAAGGAAGGAGATA AAATTGATATCGTCGTATCTTCCCTTGGTGATGCTCGGTCTCTTGAAGGTGGAGTTTTGTTACAATCCCCACTGAAAGCG GCAAACGGGGAAACCATTGCGGTTGCCTCCGGTATACTTGTGTTTGGTGGAAAAGAGAAAAAAAGAGGAGCAGATAAAAA ATCGGGTTCCAATACGGCCCTTGTTCCCATGGGTGCGATCTTAGAAAAATCGATTCCCAATGCTCCGATCATGAAATCAG TCAAACTCACTTTACTCGAAAAAGATTATACCACTATGGGTGCAATCGTGGATGCCATCACTTCGGAACTTTCCGTTGTA CCCGAAGTGGTTTCTCCCACTGAAGTCCTTGTCCCTTTGCCCACATCCCCAAACACAACAGGTCCCAATGGGGAACTCGT CTCAGGGGCACCAAAACTAGATCTCAATTTTTTATCCAAATTGGAAAACCTTACCATTAACTCCTCACCTGTGGCCCGGG TTGTCATCAATGAACGAACAGGGACCATCGTCATGGGAGCAAACATTGCCATCGATGAAGTTGCCATCTCCCAACAAGGT CTCACCATTCAGATTGCCAATCGGGACAAGGCCCGTTATTTTTTCCCCATCCAAGAGGAAGGCAAGGGGGAATCGGTGTT TGTTTTGAAAGAGAGCACACAGGTTTCCGATGTGGTGGGTGCCTTAAATAAAGTTGGGGCTTCCACAAAGGATATTATCT CCATTTTAGAAGCCTTAAAAAAACAGGGCGCGCTCAAAGCAGAACTTGTGATTCAGTAA
Upstream 100 bases:
>100_bases ATCACAAATCCAGATGGATCTGTCACAGAAAAAGCAGAACTGTCAGACAAAGAAAAACAAGAAATCATTTTGAAAAATAT CAAACGTCTCTTAGGGGAAA
Downstream 100 bases:
>100_bases TTTCCAAAATTGCCGATAGGATAACTAGACATAATATGGACATTCACAAAATCCAAGACTATTCAGGTAGGCTTAGCCGT TCTCATGATGAATCCATTCT
Product: flagellar basal body P-ring protein
Products: NA
Alternate protein names: Basal body P-ring protein [H]
Number of amino acids: Translated: 392; Mature: 391
Protein sequence:
>392_residues MSNFMNHLQSLPTRKENLSLVSLLSKHKLSSAFLKSFMIFLLLIGGNTPIFSVETRLKDLVRMDAVRENQLTGFGLVVGL NGTGDTKNPLTEEALQNYLSGLGVNTKKNLRDAKNTASVLITANVPVNLKEGDKIDIVVSSLGDARSLEGGVLLQSPLKA ANGETIAVASGILVFGGKEKKRGADKKSGSNTALVPMGAILEKSIPNAPIMKSVKLTLLEKDYTTMGAIVDAITSELSVV PEVVSPTEVLVPLPTSPNTTGPNGELVSGAPKLDLNFLSKLENLTINSSPVARVVINERTGTIVMGANIAIDEVAISQQG LTIQIANRDKARYFFPIQEEGKGESVFVLKESTQVSDVVGALNKVGASTKDIISILEALKKQGALKAELVIQ
Sequences:
>Translated_392_residues MSNFMNHLQSLPTRKENLSLVSLLSKHKLSSAFLKSFMIFLLLIGGNTPIFSVETRLKDLVRMDAVRENQLTGFGLVVGL NGTGDTKNPLTEEALQNYLSGLGVNTKKNLRDAKNTASVLITANVPVNLKEGDKIDIVVSSLGDARSLEGGVLLQSPLKA ANGETIAVASGILVFGGKEKKRGADKKSGSNTALVPMGAILEKSIPNAPIMKSVKLTLLEKDYTTMGAIVDAITSELSVV PEVVSPTEVLVPLPTSPNTTGPNGELVSGAPKLDLNFLSKLENLTINSSPVARVVINERTGTIVMGANIAIDEVAISQQG LTIQIANRDKARYFFPIQEEGKGESVFVLKESTQVSDVVGALNKVGASTKDIISILEALKKQGALKAELVIQ >Mature_391_residues SNFMNHLQSLPTRKENLSLVSLLSKHKLSSAFLKSFMIFLLLIGGNTPIFSVETRLKDLVRMDAVRENQLTGFGLVVGLN GTGDTKNPLTEEALQNYLSGLGVNTKKNLRDAKNTASVLITANVPVNLKEGDKIDIVVSSLGDARSLEGGVLLQSPLKAA NGETIAVASGILVFGGKEKKRGADKKSGSNTALVPMGAILEKSIPNAPIMKSVKLTLLEKDYTTMGAIVDAITSELSVVP EVVSPTEVLVPLPTSPNTTGPNGELVSGAPKLDLNFLSKLENLTINSSPVARVVINERTGTIVMGANIAIDEVAISQQGL TIQIANRDKARYFFPIQEEGKGESVFVLKESTQVSDVVGALNKVGASTKDIISILEALKKQGALKAELVIQ
Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]
COG id: COG1706
COG function: function code N; Flagellar basal-body P-ring protein
Gene ontology:
Cell location: Periplasm. Bacterial flagellum basal body (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgI family [H]
Homologues:
Organism=Escherichia coli, GI1787320, Length=363, Percent_Identity=32.7823691460055, Blast_Score=151, Evalue=6e-38,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001782 [H]
Pfam domain/function: PF02119 FlgI [H]
EC number: NA
Molecular weight: Translated: 41625; Mature: 41494
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFMNHLQSLPTRKENLSLVSLLSKHKLSSAFLKSFMIFLLLIGGNTPIFSVETRLKDL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH VRMDAVRENQLTGFGLVVGLNGTGDTKNPLTEEALQNYLSGLGVNTKKNLRDAKNTASVL HHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEE ITANVPVNLKEGDKIDIVVSSLGDARSLEGGVLLQSPLKAANGETIAVASGILVFGGKEK EEECCEEECCCCCEEEEEEECCCCCCCCCCCEEEECCHHHCCCCEEEEECCEEEECCCCH KRGADKKSGSNTALVPMGAILEKSIPNAPIMKSVKLTLLEKDYTTMGAIVDAITSELSVV HCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHH PEVVSPTEVLVPLPTSPNTTGPNGELVSGAPKLDLNFLSKLENLTINSSPVARVVINERT HHHCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCEECCCCEEEEEEECCC GTIVMGANIAIDEVAISQQGLTIQIANRDKARYFFPIQEEGKGESVFVLKESTQVSDVVG CEEEEECCEEEEHEEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHH ALNKVGASTKDIISILEALKKQGALKAELVIQ HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure SNFMNHLQSLPTRKENLSLVSLLSKHKLSSAFLKSFMIFLLLIGGNTPIFSVETRLKDL CHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHH VRMDAVRENQLTGFGLVVGLNGTGDTKNPLTEEALQNYLSGLGVNTKKNLRDAKNTASVL HHHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEE ITANVPVNLKEGDKIDIVVSSLGDARSLEGGVLLQSPLKAANGETIAVASGILVFGGKEK EEECCEEECCCCCEEEEEEECCCCCCCCCCCEEEECCHHHCCCCEEEEECCEEEECCCCH KRGADKKSGSNTALVPMGAILEKSIPNAPIMKSVKLTLLEKDYTTMGAIVDAITSELSVV HCCCCCCCCCCEEEEEHHHHHHHCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHH PEVVSPTEVLVPLPTSPNTTGPNGELVSGAPKLDLNFLSKLENLTINSSPVARVVINERT HHHCCCCEEEEECCCCCCCCCCCCCEECCCCCCCHHHHHHHHCCEECCCCEEEEEEECCC GTIVMGANIAIDEVAISQQGLTIQIANRDKARYFFPIQEEGKGESVFVLKESTQVSDVVG CEEEEECCEEEEHEEECCCCCEEEEECCCCCEEEEEECCCCCCCEEEEEECCCHHHHHHH ALNKVGASTKDIISILEALKKQGALKAELVIQ HHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA