| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220886
Identifier: 183220886
GI number: 183220886
Start: 1558962
End: 1560506
Strand: Direct
Name: 183220886
Synonym: LEPBI_I1499
Alternate gene names: NA
Gene position: 1558962-1560506 (Clockwise)
Preceding gene: 183220879
Following gene: 183220887
Centisome position: 43.31
GC content: 40.58
Gene sequence:
>1545_bases TTGGCATTTTTTATCTTTGTTGGAGCCGCAGTGATTCTACTTGGGTTTCTTTTGACCTTTGTCATCGGACAAAGGCGAGA TGGTTATGCCAAAGCCCTAAGCCTTGCGACTTTAGGGAATTTTCTAGATGCGCGGGCCCTTGTGCGGGAAAAATTAGAAG AAGACCACCAAAATCCCTATGGTCATTACGTGATGGCAAAAATTTATGCCATGGAAAATGACCCACTCAATGAAGCCAAA CACCTCGAAATCATCAAAAAGAACAACCGGTACACCAAAGAAATTGATGCTGTGACCGTTTCCAACCGCATTGCCGAGAT CTATTATAACAAAGATTTTTTTGAAGAAGCTTTTTTTCATTATTTGGACACCCTCCAAGTGGATCGTTCCAATCCAATCG CTTGTATTCGATTGGGTTTTATGGCTCTCGGACAAAAGGAATTCAAAATCGCAGACCATTTTTTTGCAAGGATCCCAGAA GAAAAAATCAATCTCACTTCCTATTACATTGGCAAAGGGGTGATTTCTGGGGTCACAGGTGGGGGGAAGGAAAGAGAGTA TTTTGAAAAAGCATATAAAATCGAAAAAACGCCTGTCTCTGGATTTTTATATGCCTTGTCCTTATCACGTGAAAACAAAC ATAAGGATGCAGTAAAAACTGCCATTGCCATCAGCGAACAAATTGAAGACGAGTTTGTCCGTTTTACTTTATTCCAATTC CTTATGACAGAAGCCATTCTCATGCAAAATTTTCCAGAAGCATTGAAGTATGGTAGGTTGTGTCTTGAGATGGCAAAACT CAATGCATGGCAGAGTGAAATCACAGAGTGTAGTATCCATTTTGCGATGATCACCACCTATATGGGTCGTTATGAGGAAG GGGCAGAGTATTTAATTGAAGCGGAAGCAGAACGATTGGATGACCCTGATGTCATCGCCCTTGCCAATTTAAAATACAGA TTGGAACGCGGAACGGGAACAGTTGAATCGTTAACACATGAATATGATTTGAGTCGTGAATTGAATTTACTTTCCGTCAA CTTATTCCCTAACTCCCGTTACTTTGAGCTGAGTGGGATGCGATCTTCCAAACCCTTCAATATCAAAGGGATGGTTGATG ATAGTGGCAAAAAACTCACATCCAAACTAGATATGCTCGGTCTTGATAAATTTGAAAAATTCATTAGTCTTCCTGGTACT AATTTTAAAAACCAAGCGACAAGAATGGTAATGAAACTTGGGTATCGTGTGACAAAAGAAATCTCAAATCCTGAAGCTGA TGGTGTCAATTTACTTGCTTCCTCTAAAGAAGATGTGAACAAACGCGCTTTATTTCGAGTCCGAAAATGGAAAGATGCCA AGGTGTCCGACGTTTTTTTACGGGAGATGACAAACCAAATGGAAGAATTGGGAGCTACCAAAGGATTTGTGATTGGGAAC TTTGACGTCACAGAAGCTGGAAAAAAAATCATCGCTGCGAGTAACGGAGCCTTGGAGATGTATTCGGGAGATATGTTCGA GGACCTTCTCAACAAAACTATGTAA
Upstream 100 bases:
>100_bases AGTGCAAATGAAATGTAGGTGAGCTGTATCACTTCCAGGACAGAATTGACGTAAGACTCTTTTTTACCAACCAAAATAGG AAAATAGGAAGTATTAGAAT
Downstream 100 bases:
>100_bases TGCGAAGATTTTCCCTATCAAATCAATTCAAATTCTCACAATTGAGAAAACTTAGTTTTTCATTTAAAATTGTTTCTCTC GCTCTTTTATGTTCGTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MAFFIFVGAAVILLGFLLTFVIGQRRDGYAKALSLATLGNFLDARALVREKLEEDHQNPYGHYVMAKIYAMENDPLNEAK HLEIIKKNNRYTKEIDAVTVSNRIAEIYYNKDFFEEAFFHYLDTLQVDRSNPIACIRLGFMALGQKEFKIADHFFARIPE EKINLTSYYIGKGVISGVTGGGKEREYFEKAYKIEKTPVSGFLYALSLSRENKHKDAVKTAIAISEQIEDEFVRFTLFQF LMTEAILMQNFPEALKYGRLCLEMAKLNAWQSEITECSIHFAMITTYMGRYEEGAEYLIEAEAERLDDPDVIALANLKYR LERGTGTVESLTHEYDLSRELNLLSVNLFPNSRYFELSGMRSSKPFNIKGMVDDSGKKLTSKLDMLGLDKFEKFISLPGT NFKNQATRMVMKLGYRVTKEISNPEADGVNLLASSKEDVNKRALFRVRKWKDAKVSDVFLREMTNQMEELGATKGFVIGN FDVTEAGKKIIAASNGALEMYSGDMFEDLLNKTM
Sequences:
>Translated_514_residues MAFFIFVGAAVILLGFLLTFVIGQRRDGYAKALSLATLGNFLDARALVREKLEEDHQNPYGHYVMAKIYAMENDPLNEAK HLEIIKKNNRYTKEIDAVTVSNRIAEIYYNKDFFEEAFFHYLDTLQVDRSNPIACIRLGFMALGQKEFKIADHFFARIPE EKINLTSYYIGKGVISGVTGGGKEREYFEKAYKIEKTPVSGFLYALSLSRENKHKDAVKTAIAISEQIEDEFVRFTLFQF LMTEAILMQNFPEALKYGRLCLEMAKLNAWQSEITECSIHFAMITTYMGRYEEGAEYLIEAEAERLDDPDVIALANLKYR LERGTGTVESLTHEYDLSRELNLLSVNLFPNSRYFELSGMRSSKPFNIKGMVDDSGKKLTSKLDMLGLDKFEKFISLPGT NFKNQATRMVMKLGYRVTKEISNPEADGVNLLASSKEDVNKRALFRVRKWKDAKVSDVFLREMTNQMEELGATKGFVIGN FDVTEAGKKIIAASNGALEMYSGDMFEDLLNKTM >Mature_513_residues AFFIFVGAAVILLGFLLTFVIGQRRDGYAKALSLATLGNFLDARALVREKLEEDHQNPYGHYVMAKIYAMENDPLNEAKH LEIIKKNNRYTKEIDAVTVSNRIAEIYYNKDFFEEAFFHYLDTLQVDRSNPIACIRLGFMALGQKEFKIADHFFARIPEE KINLTSYYIGKGVISGVTGGGKEREYFEKAYKIEKTPVSGFLYALSLSRENKHKDAVKTAIAISEQIEDEFVRFTLFQFL MTEAILMQNFPEALKYGRLCLEMAKLNAWQSEITECSIHFAMITTYMGRYEEGAEYLIEAEAERLDDPDVIALANLKYRL ERGTGTVESLTHEYDLSRELNLLSVNLFPNSRYFELSGMRSSKPFNIKGMVDDSGKKLTSKLDMLGLDKFEKFISLPGTN FKNQATRMVMKLGYRVTKEISNPEADGVNLLASSKEDVNKRALFRVRKWKDAKVSDVFLREMTNQMEELGATKGFVIGNF DVTEAGKKIIAASNGALEMYSGDMFEDLLNKTM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58558; Mature: 58427
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFFIFVGAAVILLGFLLTFVIGQRRDGYAKALSLATLGNFLDARALVREKLEEDHQNPY CEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHYVMAKIYAMENDPLNEAKHLEIIKKNNRYTKEIDAVTVSNRIAEIYYNKDFFEEAFFH CCEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHEEHHHHHHHHHCCHHHHHHHHHH YLDTLQVDRSNPIACIRLGFMALGQKEFKIADHFFARIPEEKINLTSYYIGKGVISGVTG HHHHHEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHEECCCHHHHCCCC GGKEREYFEKAYKIEKTPVSGFLYALSLSRENKHKDAVKTAIAISEQIEDEFVRFTLFQF CCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LMTEAILMQNFPEALKYGRLCLEMAKLNAWQSEITECSIHFAMITTYMGRYEEGAEYLIE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAERLDDPDVIALANLKYRLERGTGTVESLTHEYDLSRELNLLSVNLFPNSRYFELSGM HHHHHCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCC RSSKPFNIKGMVDDSGKKLTSKLDMLGLDKFEKFISLPGTNFKNQATRMVMKLGYRVTKE CCCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ISNPEADGVNLLASSKEDVNKRALFRVRKWKDAKVSDVFLREMTNQMEELGATKGFVIGN CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC FDVTEAGKKIIAASNGALEMYSGDMFEDLLNKTM CCHHHHCCEEEEECCCCEEECCCHHHHHHHHHCC >Mature Secondary Structure AFFIFVGAAVILLGFLLTFVIGQRRDGYAKALSLATLGNFLDARALVREKLEEDHQNPY EEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHYVMAKIYAMENDPLNEAKHLEIIKKNNRYTKEIDAVTVSNRIAEIYYNKDFFEEAFFH CCEEEEEEEEECCCCCCCHHHHHHHCCCCCCHHHHHHEEHHHHHHHHHCCHHHHHHHHHH YLDTLQVDRSNPIACIRLGFMALGQKEFKIADHFFARIPEEKINLTSYYIGKGVISGVTG HHHHHEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHCCHHHCCHHHEECCCHHHHCCCC GGKEREYFEKAYKIEKTPVSGFLYALSLSRENKHKDAVKTAIAISEQIEDEFVRFTLFQF CCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LMTEAILMQNFPEALKYGRLCLEMAKLNAWQSEITECSIHFAMITTYMGRYEEGAEYLIE HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAERLDDPDVIALANLKYRLERGTGTVESLTHEYDLSRELNLLSVNLFPNSRYFELSGM HHHHHCCCCCEEEEECCEEEEECCCCHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCC RSSKPFNIKGMVDDSGKKLTSKLDMLGLDKFEKFISLPGTNFKNQATRMVMKLGYRVTKE CCCCCEEEEEEECCCCHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH ISNPEADGVNLLASSKEDVNKRALFRVRKWKDAKVSDVFLREMTNQMEELGATKGFVIGN CCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEC FDVTEAGKKIIAASNGALEMYSGDMFEDLLNKTM CCHHHHCCEEEEECCCCEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA