| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220852
Identifier: 183220852
GI number: 183220852
Start: 1527358
End: 1527741
Strand: Direct
Name: 183220852
Synonym: LEPBI_I1465
Alternate gene names: NA
Gene position: 1527358-1527741 (Clockwise)
Preceding gene: 183220851
Following gene: 183220858
Centisome position: 42.43
GC content: 45.31
Gene sequence:
>384_bases TTGTCAGGGCATACCTTACTCATTGGTTCATTTGGAGCCACCGCTGTTTTATTATTTGCTGTTCCAGATGCACCCCTTTC CCAACCACGAAATCTCATCGGAGGTCATATCCTTTCTGCATGTATCGCCGTTTTGCTTGTACAAACAATCGGCACTAATT TTTTGACGATCGGGTTATCGGTTGGTCTTTCAATCCTTGTCATGTATCTGACTCATACCTTACACCCTCCAGGAGGGGCC ACTGCGCTGATTGGTGTGATTGGGGGAGTGGGAGTGGAATTTATATTTTTTCCCGTTATGGTAGGTGTTCTTGTATTACT TTGTAATGCGTTAGTCGTGAACAATCTGGTACACCACCGGAAGTATCCGGTGGTGTGGTTTTAG
Upstream 100 bases:
>100_bases ACCACTTCTCGCGAAACGAAACAAACTTTCCTATCGTTTTGCCATTTGGAGTTTTATCAGTAGTACGGTTTCGATATGGT CCATTTTAATCATTACTAAT
Downstream 100 bases:
>100_bases GTTTTACCAGTTTAGTTTTTTGGAGTCTTCGACAAACTTAGCAAGTCCACTGTCTGTGAGTGGGTGTTTGAATAACATTT CAAATACCGAATAAGGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: HPP Family Protein+B; CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Domain-Containing Protein; HPP Family Membrane Protein; Transmembrane Protein; CBS Domain-Containing Membrane Protein; Conserved Protein; Cbs Domain Containing Membrane Protein; HPP Family; HPP Domain Protein
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MSGHTLLIGSFGATAVLLFAVPDAPLSQPRNLIGGHILSACIAVLLVQTIGTNFLTIGLSVGLSILVMYLTHTLHPPGGA TALIGVIGGVGVEFIFFPVMVGVLVLLCNALVVNNLVHHRKYPVVWF
Sequences:
>Translated_127_residues MSGHTLLIGSFGATAVLLFAVPDAPLSQPRNLIGGHILSACIAVLLVQTIGTNFLTIGLSVGLSILVMYLTHTLHPPGGA TALIGVIGGVGVEFIFFPVMVGVLVLLCNALVVNNLVHHRKYPVVWF >Mature_126_residues SGHTLLIGSFGATAVLLFAVPDAPLSQPRNLIGGHILSACIAVLLVQTIGTNFLTIGLSVGLSILVMYLTHTLHPPGGAT ALIGVIGGVGVEFIFFPVMVGVLVLLCNALVVNNLVHHRKYPVVWF
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13294; Mature: 13163
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGHTLLIGSFGATAVLLFAVPDAPLSQPRNLIGGHILSACIAVLLVQTIGTNFLTIGLS CCCCEEEEECCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VGLSILVMYLTHTLHPPGGATALIGVIGGVGVEFIFFPVMVGVLVLLCNALVVNNLVHHR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KYPVVWF CCCCCCC >Mature Secondary Structure SGHTLLIGSFGATAVLLFAVPDAPLSQPRNLIGGHILSACIAVLLVQTIGTNFLTIGLS CCCEEEEECCCHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VGLSILVMYLTHTLHPPGGATALIGVIGGVGVEFIFFPVMVGVLVLLCNALVVNNLVHHR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KYPVVWF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA