| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yidB [C]
Identifier: 183220835
GI number: 183220835
Start: 1511866
End: 1512267
Strand: Direct
Name: yidB [C]
Synonym: LEPBI_I1447
Alternate gene names: 183220835
Gene position: 1511866-1512267 (Clockwise)
Preceding gene: 183220833
Following gene: 183220842
Centisome position: 42.0
GC content: 42.54
Gene sequence:
>402_bases ATGAGTTTTTTTGAAAGTTTAAAAGCCGTAGCAGCTCAGGCAGTCGAGCTAGTCCAAAACAATCCACAAGTAGTTTCTGG AATCCAGAAGATCATCGAAGAGAACGGTGGAGTTTCTGGCATTGTTGCAAAATTCAAAGAAAAAGGGTTTTCAGAAGCCG CTTCTTCTTGGGTTGGAACGGGAGACAATGTTAGCATTGGAGCTGATGATGTGTTAAAGGTTTTAGGAAATGATTCGGTA AAAGATTTAGCATCCAAAGTGGGTCTCGACACCGATGCCACAGCAGGATTAGTGGGAAATTTATTACCACTCGTGATTGA CAAACTTTCTCCCGATGGAAAGGAACCAGGTGGGGACATCGCATCCCAACTTTCGAGTTTGGCTTCTTTGTTTACGAAAT AA
Upstream 100 bases:
>100_bases TTGGAAAGCAATCAATTATTGGCTTTGGAGTTAGGATAAAGTTGGATTTTAAGAAAAAAATTTCTTTCCATATCTTTTTG GATCGGGCAGAATACCCGTC
Downstream 100 bases:
>100_bases GATCAGGATGTTGATGAACTAATTTGGTTTTGACGTATCTTCTTTGATTTCCGTAAAACTTCGGTCCGGATTCATCGTAT AAGCACCTTTAAAAGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSFFESLKAVAAQAVELVQNNPQVVSGIQKIIEENGGVSGIVAKFKEKGFSEAASSWVGTGDNVSIGADDVLKVLGNDSV KDLASKVGLDTDATAGLVGNLLPLVIDKLSPDGKEPGGDIASQLSSLASLFTK
Sequences:
>Translated_133_residues MSFFESLKAVAAQAVELVQNNPQVVSGIQKIIEENGGVSGIVAKFKEKGFSEAASSWVGTGDNVSIGADDVLKVLGNDSV KDLASKVGLDTDATAGLVGNLLPLVIDKLSPDGKEPGGDIASQLSSLASLFTK >Mature_132_residues SFFESLKAVAAQAVELVQNNPQVVSGIQKIIEENGGVSGIVAKFKEKGFSEAASSWVGTGDNVSIGADDVLKVLGNDSVK DLASKVGLDTDATAGLVGNLLPLVIDKLSPDGKEPGGDIASQLSSLASLFTK
Specific function: Unknown
COG id: COG3753
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13603; Mature: 13472
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFFESLKAVAAQAVELVQNNPQVVSGIQKIIEENGGVSGIVAKFKEKGFSEAASSWVGT CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GDNVSIGADDVLKVLGNDSVKDLASKVGLDTDATAGLVGNLLPLVIDKLSPDGKEPGGDI CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH ASQLSSLASLFTK HHHHHHHHHHHCC >Mature Secondary Structure SFFESLKAVAAQAVELVQNNPQVVSGIQKIIEENGGVSGIVAKFKEKGFSEAASSWVGT CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC GDNVSIGADDVLKVLGNDSVKDLASKVGLDTDATAGLVGNLLPLVIDKLSPDGKEPGGDI CCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHH ASQLSSLASLFTK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA