Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220556
Identifier: 183220556
GI number: 183220556
Start: 1207560
End: 1208108
Strand: Direct
Name: 183220556
Synonym: LEPBI_I1160
Alternate gene names: NA
Gene position: 1207560-1208108 (Clockwise)
Preceding gene: 183220554
Following gene: 183220557
Centisome position: 33.55
GC content: 42.08
Gene sequence:
>549_bases ATGAAGCTACTCAAGCGATACGCAAACCGCAGGCTCTATGATCCAGAAACAAGTTCCACGATCACCTTAGAAGATGTGGC AAAGATGATCATCGGCGGAGAAGAGATCAAAGTCCAAGACAATCTTTCGGGAGAAGACATCACTCCTAAAATCCTCGGCC AAACATTTTTGAAAGTAAGCCTTGGCCAAAGGAACGAAGATTTTTCGAATTTTATGTTAACCTCACTGATTCGGGAAACA GGCCGAGATGTTTCGGGGCTTTTTGAACGGCTGGTTCTCGGAGGGATTGGTGCCAATTACCTGACCCGGGAACGACTGGA AAAAATTGTGAATTCAATGGTAGAATTGGGTGAATTAAAGGAAGTTGATTTTAGCCTCTACCGAGAAGATTTGCTCCGCA AAATGGCGTCTCGTGCGAGCGAAAAAAAGGAACAAATCCAAAAGGATTTGGAAAAATTCAGCCAATCGATTTTGGAAGAA GACAAAGCCACACTCGGTGACCTTTCTGAAAAATTAAAAGAAGTCGCAGAAAAATTAAAAGAAAATTAA
Upstream 100 bases:
>100_bases GTTCAGGAAGTTGTGTCAAAACGGCACCGAATAGTGAGTCCATACGATTGTATTTTAGTTGACCCCCTAGGCTTGAAAGT CATTTTAAAAAGCATCTCCA
Downstream 100 bases:
>100_bases CCAAAATCGGTTACAATGTCCTCCGATTTCGGGGGAAATGAATGAAATTCCAATATGTTCTTTTGTTACTTGTACTTACC AGTGGGAGCGTTTTCTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Regulator For Granula-Associated Protein
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MKLLKRYANRRLYDPETSSTITLEDVAKMIIGGEEIKVQDNLSGEDITPKILGQTFLKVSLGQRNEDFSNFMLTSLIRET GRDVSGLFERLVLGGIGANYLTRERLEKIVNSMVELGELKEVDFSLYREDLLRKMASRASEKKEQIQKDLEKFSQSILEE DKATLGDLSEKLKEVAEKLKEN
Sequences:
>Translated_182_residues MKLLKRYANRRLYDPETSSTITLEDVAKMIIGGEEIKVQDNLSGEDITPKILGQTFLKVSLGQRNEDFSNFMLTSLIRET GRDVSGLFERLVLGGIGANYLTRERLEKIVNSMVELGELKEVDFSLYREDLLRKMASRASEKKEQIQKDLEKFSQSILEE DKATLGDLSEKLKEVAEKLKEN >Mature_182_residues MKLLKRYANRRLYDPETSSTITLEDVAKMIIGGEEIKVQDNLSGEDITPKILGQTFLKVSLGQRNEDFSNFMLTSLIRET GRDVSGLFERLVLGGIGANYLTRERLEKIVNSMVELGELKEVDFSLYREDLLRKMASRASEKKEQIQKDLEKFSQSILEE DKATLGDLSEKLKEVAEKLKEN
Specific function: Unknown
COG id: COG5394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20779; Mature: 20779
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKRYANRRLYDPETSSTITLEDVAKMIIGGEEIKVQDNLSGEDITPKILGQTFLKVS CHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHH LGQRNEDFSNFMLTSLIRETGRDVSGLFERLVLGGIGANYLTRERLEKIVNSMVELGELK HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EVDFSLYREDLLRKMASRASEKKEQIQKDLEKFSQSILEEDKATLGDLSEKLKEVAEKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EN CC >Mature Secondary Structure MKLLKRYANRRLYDPETSSTITLEDVAKMIIGGEEIKVQDNLSGEDITPKILGQTFLKVS CHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHH LGQRNEDFSNFMLTSLIRETGRDVSGLFERLVLGGIGANYLTRERLEKIVNSMVELGELK HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EVDFSLYREDLLRKMASRASEKKEQIQKDLEKFSQSILEEDKATLGDLSEKLKEVAEKLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EN CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA