Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220552
Identifier: 183220552
GI number: 183220552
Start: 1204392
End: 1205291
Strand: Direct
Name: 183220552
Synonym: LEPBI_I1156
Alternate gene names: NA
Gene position: 1204392-1205291 (Clockwise)
Preceding gene: 183220551
Following gene: 183220553
Centisome position: 33.46
GC content: 38.78
Gene sequence:
>900_bases ATGATTTATTTCTACTTAAAACTCATGCGGATCCCTCAGTGGATCAAAAATATCATCCTATTTGCTGGATTGATTTTTTC CAAACGGATTTTTGATCTGCCATCTTTGACTAAGGTCTGTTTGGCGTTCCTTTGTTTTTCTTTAGTGGCAAGTTGTCAGT ATGTATTCAATGACTTCCTCGACCAAAAAGAGGATGCGAAACACCCGGAAAAAAAACATAGACCCCTTGCGAGTGGGGAT TTGGATTCTGGCATTGCACTTGCCATCACAGGAGTTCTACTTCCAATTGCATTGATAGGTTCTTATAAACTTTCACCAGT TTTCTTTTACCTTACAATCTTCTATTTACTCTTCAATATGTTATATAGTAAGGTTCTCAAACACATTGTGATTTTAGATG TGATGAGTATCTCCATTGGATTTGTACTACGTGCCATCGCTGGGGCCGTTGTCATTGGAGTTGAGTTTTCTCACTGGTTA CTTCTTTGTACATTCATGTTAGCTCTTTTTTGGGGATTCTCCAAACGAAGGGGAGAGATTAATATATTAAAAACAGATGC TGGCAAACATCGAAAAATATTGGAAGAGTATTCGATTGAATTCCTCGATCTGATGATGGCTGTTGTGGCAACACTAACTC TCGTTAGTTACGTAATGTATGCTGTGAGCCCTGAAACCGCAAAAAGTTTAGGAACTCCTTATATGGTGTATACAGTTCCG ATTGTGGTATATGCCATTTTTCGTTCCTTGTATATCATTTATATTAAAAACATGGGCCATAACCCAACGAGGGCCATATT GACAGATGTGAGTGTTCTCGTTTCGGGTGCGATTTGGCTTGTTCTGATCTTATTTTTGATGTTTGGGAACTTATCGGGTC ATCCACCAGTCTACCAATAG
Upstream 100 bases:
>100_bases GAAGAAATCCACAAATCCATTTGGTATTTCCTATGATTTACAATGCCAAAACCATCAAACTGAAAATGAAATACATAGAA GCCCATAAAGTGAAGAAAAA
Downstream 100 bases:
>100_bases AGATGATGAAAATTTGGAAGCAGTTACCTTATGGCTGGAAGGTGTTTTTTGCGTTTGTTTTCTTTTTTTCGGCAACATTA GGATTTGCTTATTTTAAAGC
Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MIYFYLKLMRIPQWIKNIILFAGLIFSKRIFDLPSLTKVCLAFLCFSLVASCQYVFNDFLDQKEDAKHPEKKHRPLASGD LDSGIALAITGVLLPIALIGSYKLSPVFFYLTIFYLLFNMLYSKVLKHIVILDVMSISIGFVLRAIAGAVVIGVEFSHWL LLCTFMLALFWGFSKRRGEINILKTDAGKHRKILEEYSIEFLDLMMAVVATLTLVSYVMYAVSPETAKSLGTPYMVYTVP IVVYAIFRSLYIIYIKNMGHNPTRAILTDVSVLVSGAIWLVLILFLMFGNLSGHPPVYQ
Sequences:
>Translated_299_residues MIYFYLKLMRIPQWIKNIILFAGLIFSKRIFDLPSLTKVCLAFLCFSLVASCQYVFNDFLDQKEDAKHPEKKHRPLASGD LDSGIALAITGVLLPIALIGSYKLSPVFFYLTIFYLLFNMLYSKVLKHIVILDVMSISIGFVLRAIAGAVVIGVEFSHWL LLCTFMLALFWGFSKRRGEINILKTDAGKHRKILEEYSIEFLDLMMAVVATLTLVSYVMYAVSPETAKSLGTPYMVYTVP IVVYAIFRSLYIIYIKNMGHNPTRAILTDVSVLVSGAIWLVLILFLMFGNLSGHPPVYQ >Mature_299_residues MIYFYLKLMRIPQWIKNIILFAGLIFSKRIFDLPSLTKVCLAFLCFSLVASCQYVFNDFLDQKEDAKHPEKKHRPLASGD LDSGIALAITGVLLPIALIGSYKLSPVFFYLTIFYLLFNMLYSKVLKHIVILDVMSISIGFVLRAIAGAVVIGVEFSHWL LLCTFMLALFWGFSKRRGEINILKTDAGKHRKILEEYSIEFLDLMMAVVATLTLVSYVMYAVSPETAKSLGTPYMVYTVP IVVYAIFRSLYIIYIKNMGHNPTRAILTDVSVLVSGAIWLVLILFLMFGNLSGHPPVYQ
Specific function: Possible permease/transporter [H]
COG id: COG0382
COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: NA
Molecular weight: Translated: 33853; Mature: 33853
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFYLKLMRIPQWIKNIILFAGLIFSKRIFDLPSLTKVCLAFLCFSLVASCQYVFNDFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DQKEDAKHPEKKHRPLASGDLDSGIALAITGVLLPIALIGSYKLSPVFFYLTIFYLLFNM CCCHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYSKVLKHIVILDVMSISIGFVLRAIAGAVVIGVEFSHWLLLCTFMLALFWGFSKRRGEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE NILKTDAGKHRKILEEYSIEFLDLMMAVVATLTLVSYVMYAVSPETAKSLGTPYMVYTVP EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHH IVVYAIFRSLYIIYIKNMGHNPTRAILTDVSVLVSGAIWLVLILFLMFGNLSGHPPVYQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIYFYLKLMRIPQWIKNIILFAGLIFSKRIFDLPSLTKVCLAFLCFSLVASCQYVFNDFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DQKEDAKHPEKKHRPLASGDLDSGIALAITGVLLPIALIGSYKLSPVFFYLTIFYLLFNM CCCHHCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LYSKVLKHIVILDVMSISIGFVLRAIAGAVVIGVEFSHWLLLCTFMLALFWGFSKRRGEI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE NILKTDAGKHRKILEEYSIEFLDLMMAVVATLTLVSYVMYAVSPETAKSLGTPYMVYTVP EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHH IVVYAIFRSLYIIYIKNMGHNPTRAILTDVSVLVSGAIWLVLILFLMFGNLSGHPPVYQ HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]