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The map label for this gene is 183220536

Identifier: 183220536

GI number: 183220536

Start: 1187594

End: 1189132

Strand: Direct

Name: 183220536

Synonym: LEPBI_I1139

Alternate gene names: NA

Gene position: 1187594-1189132 (Clockwise)

Preceding gene: 183220535

Following gene: 183220537

Centisome position: 32.99

GC content: 43.53

Gene sequence:

>1539_bases
ATGGAAACAGAATGGGATGTGATTGTCCTTGGCTCAGGCCTTGGGGGGCTCAGTGCTGCCTTGGCCTTTGCTACAAAGGG
CAAACGGGTTTTGGTTCTCGAAAAAAGTATCTCACCTGGCGGTTGTGCCTCAAGTTTTTGGAAAAATGGATATCTGTTTG
AATCCGGTGCCACAACTCTCGTTGGTTTTGAACGAGGATTGCCTTTGGACAGATTTTCGAAAGAACTTGGTGTAAAGTTC
CCCATCATACCCTTAGAACGGTCGATGGTCGTCCATCTGAACGGATCCCGAATTGAAAGGTTTCAAGACCGAACGTTATG
GATCAGTGAATCCTTACGTGTGTTCGGCGGTGGACTGCGCATGAAATTCTTTTGGAAACTTTGTTTTTTTGTATCTGATA
GGCTTTGGAATTTGTCAGCACGCTACAAATGGTTTCCGTTTCGGACTTTTGGGGATATTAGAAAAACAATATTTGTCTTC
CGCCCACTTGATCTCATCGTCTTTTTGTTTTCCTTTGTTTCCATACGATTTGTCCAAAAAATTTTATTTTTGCATCAAAA
CAAAGATTGGAATTCCTTTTTAGACGAACAACTTCTCATCACAAACCAAACCACTGCAGTGGATGCCCCATTTGGTATGG
CCGCCGCTGGTCTTACCTATCCGAATTTACAAAACTATATTGTGCCAGGGGGTATGGTCGAACTGGCAAATACCATTCTT
CGGAGTTTGTCTGAAAAAAAAGGAGAGATCCTTTATAAACAGGAAGTGGTCAAGGTCAGAAAATTAACAGTTCCAAAAAA
TGGAAGTCCAGGATCGATCGAAACCAACACAGTTTGGGAAGTGGTTACTAAAAATAGAGAAAACAATGTTTTCCGAGCCC
CCATCCTTGTCTCGAACCTTCCTGTATGGAATTTGACCGAACTTGCCGTAGACCTCCCTCGATTGAAACAGAAAGTGGGC
GCGATGGAAAAGGGAATCTGGGGTGCTTTTACCATGGGGATTGTCGTTCTGGTAGGCACAGAATACGAGTTGCTTGCATC
TGAATGCCTCCACCACCAAATCCATTTGCCAGAGGATTTACCCTATGGTGGAGGAAAGTCAGTCTTTGTATCCATCTCAC
ATCCCAAAGATACCGTTCGCACAAAGGACGGAAGTTATACCCTCTCTCTTTCTACCCACATAAAAGACCCAGAAGTATGG
AAACGAGATAAAGACTATCCAGCCAAGAAAAAAGAAATCGAATCCATCCTCATATCGGTTTTGGAAAAAGAGTTTGATTG
GTTCCAAAGGGAAAAAATTTTATTTTCTCACTCTGCAACGCCTGTTACATGGCAAACTTGGACAGGGCGAAAATTTGGTA
GAGTCGGAGGGATTCCTTCCTCTTATTTTTTTAATCCCTTTCGGATGGTTTCCAATCGTTCGGAGGACCCAAGTCTTTTG
TTAACAGGAGATACGGTTTACCCAGGACAAGGGATCCCTGCTGTGGTACTTGGTGGGCTCAATGCTGTGGAACAATTCTA
CGGAAGAAAGAGAGGTTGA

Upstream 100 bases:

>100_bases
CGGAGTGAATTGAAAAAAAATCGTTCTGATCAAATCACAAAAATCATTTGGACATAAAATCTTTTTCCCATTCGATTTTC
ACATCCAGTCTACTGGATAG

Downstream 100 bases:

>100_bases
TTTTGAAGCCGAATCGTAGAGCCTGGGCGAAACGATGGTTCGCTTACCAAAGATTCATATCAAAGTCCCAGGGACTTCTG
CCAATTTGGGCCCTGGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: Phytoene Dehydrogenase; C-3 4' Desaturase CrtD; FAD Dependent Oxidoreductase; Phytoene Dehydrogenase ; Carotenoid Isomerase; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Phytoene Dehydrogenase And Related Proteins-Like; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase-Related Protein; Phytoene Dehydrogenase/Carotenoid Isomerase

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
METEWDVIVLGSGLGGLSAALAFATKGKRVLVLEKSISPGGCASSFWKNGYLFESGATTLVGFERGLPLDRFSKELGVKF
PIIPLERSMVVHLNGSRIERFQDRTLWISESLRVFGGGLRMKFFWKLCFFVSDRLWNLSARYKWFPFRTFGDIRKTIFVF
RPLDLIVFLFSFVSIRFVQKILFLHQNKDWNSFLDEQLLITNQTTAVDAPFGMAAAGLTYPNLQNYIVPGGMVELANTIL
RSLSEKKGEILYKQEVVKVRKLTVPKNGSPGSIETNTVWEVVTKNRENNVFRAPILVSNLPVWNLTELAVDLPRLKQKVG
AMEKGIWGAFTMGIVVLVGTEYELLASECLHHQIHLPEDLPYGGGKSVFVSISHPKDTVRTKDGSYTLSLSTHIKDPEVW
KRDKDYPAKKKEIESILISVLEKEFDWFQREKILFSHSATPVTWQTWTGRKFGRVGGIPSSYFFNPFRMVSNRSEDPSLL
LTGDTVYPGQGIPAVVLGGLNAVEQFYGRKRG

Sequences:

>Translated_512_residues
METEWDVIVLGSGLGGLSAALAFATKGKRVLVLEKSISPGGCASSFWKNGYLFESGATTLVGFERGLPLDRFSKELGVKF
PIIPLERSMVVHLNGSRIERFQDRTLWISESLRVFGGGLRMKFFWKLCFFVSDRLWNLSARYKWFPFRTFGDIRKTIFVF
RPLDLIVFLFSFVSIRFVQKILFLHQNKDWNSFLDEQLLITNQTTAVDAPFGMAAAGLTYPNLQNYIVPGGMVELANTIL
RSLSEKKGEILYKQEVVKVRKLTVPKNGSPGSIETNTVWEVVTKNRENNVFRAPILVSNLPVWNLTELAVDLPRLKQKVG
AMEKGIWGAFTMGIVVLVGTEYELLASECLHHQIHLPEDLPYGGGKSVFVSISHPKDTVRTKDGSYTLSLSTHIKDPEVW
KRDKDYPAKKKEIESILISVLEKEFDWFQREKILFSHSATPVTWQTWTGRKFGRVGGIPSSYFFNPFRMVSNRSEDPSLL
LTGDTVYPGQGIPAVVLGGLNAVEQFYGRKRG
>Mature_512_residues
METEWDVIVLGSGLGGLSAALAFATKGKRVLVLEKSISPGGCASSFWKNGYLFESGATTLVGFERGLPLDRFSKELGVKF
PIIPLERSMVVHLNGSRIERFQDRTLWISESLRVFGGGLRMKFFWKLCFFVSDRLWNLSARYKWFPFRTFGDIRKTIFVF
RPLDLIVFLFSFVSIRFVQKILFLHQNKDWNSFLDEQLLITNQTTAVDAPFGMAAAGLTYPNLQNYIVPGGMVELANTIL
RSLSEKKGEILYKQEVVKVRKLTVPKNGSPGSIETNTVWEVVTKNRENNVFRAPILVSNLPVWNLTELAVDLPRLKQKVG
AMEKGIWGAFTMGIVVLVGTEYELLASECLHHQIHLPEDLPYGGGKSVFVSISHPKDTVRTKDGSYTLSLSTHIKDPEVW
KRDKDYPAKKKEIESILISVLEKEFDWFQREKILFSHSATPVTWQTWTGRKFGRVGGIPSSYFFNPFRMVSNRSEDPSLL
LTGDTVYPGQGIPAVVLGGLNAVEQFYGRKRG

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57840; Mature: 57840

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METEWDVIVLGSGLGGLSAALAFATKGKRVLVLEKSISPGGCASSFWKNGYLFESGATTL
CCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEECCCCEE
VGFERGLPLDRFSKELGVKFPIIPLERSMVVHLNGSRIERFQDRTLWISESLRVFGGGLR
EEECCCCCHHHHHHHHCCCCCEEECCCEEEEEECCHHHHHHHCCEEEEECCHHHHCCCCH
MKFFWKLCFFVSDRLWNLSARYKWFPFRTFGDIRKTIFVFRPLDLIVFLFSFVSIRFVQK
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH
ILFLHQNKDWNSFLDEQLLITNQTTAVDAPFGMAAAGLTYPNLQNYIVPGGMVELANTIL
HHHHHCCCCHHHHCCCEEEEECCCCEECCCCCHHHCCCCCCCCCCEECCCHHHHHHHHHH
RSLSEKKGEILYKQEVVKVRKLTVPKNGSPGSIETNTVWEVVTKNRENNVFRAPILVSNL
HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHEEEECCCCCCCEEECCEEEECC
PVWNLTELAVDLPRLKQKVGAMEKGIWGAFTMGIVVLVGTEYELLASECLHHQIHLPEDL
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCCC
PYGGGKSVFVSISHPKDTVRTKDGSYTLSLSTHIKDPEVWKRDKDYPAKKKEIESILISV
CCCCCCEEEEEECCCCHHCEECCCCEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHH
LEKEFDWFQREKILFSHSATPVTWQTWTGRKFGRVGGIPSSYFFNPFRMVSNRSEDPSLL
HHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCEE
LTGDTVYPGQGIPAVVLGGLNAVEQFYGRKRG
EECCEECCCCCCCCEEECCHHHHHHHHCCCCC
>Mature Secondary Structure
METEWDVIVLGSGLGGLSAALAFATKGKRVLVLEKSISPGGCASSFWKNGYLFESGATTL
CCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHCCCEEEECCCCEE
VGFERGLPLDRFSKELGVKFPIIPLERSMVVHLNGSRIERFQDRTLWISESLRVFGGGLR
EEECCCCCHHHHHHHHCCCCCEEECCCEEEEEECCHHHHHHHCCEEEEECCHHHHCCCCH
MKFFWKLCFFVSDRLWNLSARYKWFPFRTFGDIRKTIFVFRPLDLIVFLFSFVSIRFVQK
HHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH
ILFLHQNKDWNSFLDEQLLITNQTTAVDAPFGMAAAGLTYPNLQNYIVPGGMVELANTIL
HHHHHCCCCHHHHCCCEEEEECCCCEECCCCCHHHCCCCCCCCCCEECCCHHHHHHHHHH
RSLSEKKGEILYKQEVVKVRKLTVPKNGSPGSIETNTVWEVVTKNRENNVFRAPILVSNL
HHHHHHCCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHEEEECCCCCCCEEECCEEEECC
PVWNLTELAVDLPRLKQKVGAMEKGIWGAFTMGIVVLVGTEYELLASECLHHQIHLPEDL
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHCCCCCCCC
PYGGGKSVFVSISHPKDTVRTKDGSYTLSLSTHIKDPEVWKRDKDYPAKKKEIESILISV
CCCCCCEEEEEECCCCHHCEECCCCEEEEEEECCCCCHHHCCCCCCCHHHHHHHHHHHHH
LEKEFDWFQREKILFSHSATPVTWQTWTGRKFGRVGGIPSSYFFNPFRMVSNRSEDPSLL
HHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHCCCCCCCCEE
LTGDTVYPGQGIPAVVLGGLNAVEQFYGRKRG
EECCEECCCCCCCCEEECCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA