Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220499
Identifier: 183220499
GI number: 183220499
Start: 1146472
End: 1147005
Strand: Direct
Name: 183220499
Synonym: LEPBI_I1099
Alternate gene names: NA
Gene position: 1146472-1147005 (Clockwise)
Preceding gene: 183220498
Following gene: 183220500
Centisome position: 31.85
GC content: 44.94
Gene sequence:
>534_bases ATGCGTAAGATTCATTTCCTTTTCCCCCTGTTATTTGTACTTCTTGTACAATGTTCTCCTGATGAAGAAAAAGGAATCAT TCCTGGGACCAACATCACAGGTGATCCACTCACGGATGCACTGTTACTGGGTGTATTGTCTGTTCCGCCATGCCAATTTC TCACAACACAAAATGTGAATGCACCCGTTGTCGTAGGAGAAGGGGGAGGATCTGTTTGTAGCACCGAACTTTTGAATGGA TCATTACAAGTTTCGACGACAGGTACATACCAAATCAGCGCAACCGCTGGAAAACAAACCCTTTCTTCGTCAAGGTGTCA GTCCAGTTATTTTGACTTTCATATCTCCTTAAAAGAGGGGAGTTCGGAACTCCACTCATCGGTCACACCTGGTATGGCGA ATGTGACGTTAACTGTCGGGACCACCTATACATTACAAGCCTCAGGTATTGTGGATCCCAATTTATACGACTGCCAAGGT CGGTCTGTGACCTCCACTGTCACACCTTATCGGATCAATTTTCGTAAGCTCTAA
Upstream 100 bases:
>100_bases TGATGGATCAGATTCGAAAAAATTTCAAAATTCTGAAACCATAATAGAACCAAACACATACATTTTTTACCTACCTATGA CAATCATAAGTAGGTAAAGT
Downstream 100 bases:
>100_bases AGTTGTTTCACTCACACTCTCTTTAGGTAGTTTCCGCAATTGCGGAAACCTACCATCGCTTTCCCACCGTTAGGAGGTTA CACTCGACTCATGAGGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRKIHFLFPLLFVLLVQCSPDEEKGIIPGTNITGDPLTDALLLGVLSVPPCQFLTTQNVNAPVVVGEGGGSVCSTELLNG SLQVSTTGTYQISATAGKQTLSSSRCQSSYFDFHISLKEGSSELHSSVTPGMANVTLTVGTTYTLQASGIVDPNLYDCQG RSVTSTVTPYRINFRKL
Sequences:
>Translated_177_residues MRKIHFLFPLLFVLLVQCSPDEEKGIIPGTNITGDPLTDALLLGVLSVPPCQFLTTQNVNAPVVVGEGGGSVCSTELLNG SLQVSTTGTYQISATAGKQTLSSSRCQSSYFDFHISLKEGSSELHSSVTPGMANVTLTVGTTYTLQASGIVDPNLYDCQG RSVTSTVTPYRINFRKL >Mature_177_residues MRKIHFLFPLLFVLLVQCSPDEEKGIIPGTNITGDPLTDALLLGVLSVPPCQFLTTQNVNAPVVVGEGGGSVCSTELLNG SLQVSTTGTYQISATAGKQTLSSSRCQSSYFDFHISLKEGSSELHSSVTPGMANVTLTVGTTYTLQASGIVDPNLYDCQG RSVTSTVTPYRINFRKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18835; Mature: 18835
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIHFLFPLLFVLLVQCSPDEEKGIIPGTNITGDPLTDALLLGVLSVPPCQFLTTQNVN CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC APVVVGEGGGSVCSTELLNGSLQVSTTGTYQISATAGKQTLSSSRCQSSYFDFHISLKEG CCEEEECCCCCEEEHHHCCCEEEEEECCEEEEEECCCCHHHHHHHCCCCEEEEEEEECCC SSELHSSVTPGMANVTLTVGTTYTLQASGIVDPNLYDCQGRSVTSTVTPYRINFRKL CHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEC >Mature Secondary Structure MRKIHFLFPLLFVLLVQCSPDEEKGIIPGTNITGDPLTDALLLGVLSVPPCQFLTTQNVN CCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCC APVVVGEGGGSVCSTELLNGSLQVSTTGTYQISATAGKQTLSSSRCQSSYFDFHISLKEG CCEEEECCCCCEEEHHHCCCEEEEEECCEEEEEECCCCHHHHHHHCCCCEEEEEEEECCC SSELHSSVTPGMANVTLTVGTTYTLQASGIVDPNLYDCQGRSVTSTVTPYRINFRKL CHHHHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCEEECCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA