Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220497
Identifier: 183220497
GI number: 183220497
Start: 1144983
End: 1145717
Strand: Direct
Name: 183220497
Synonym: LEPBI_I1096
Alternate gene names: NA
Gene position: 1144983-1145717 (Clockwise)
Preceding gene: 183220496
Following gene: 183220498
Centisome position: 31.81
GC content: 40.68
Gene sequence:
>735_bases TTGAACGTAGGAGCAGAGGAGATTCCAGATGAAGGACGAACCAGTCTATATCAGATCTATTCCTTCACTCCGGACATTTT GATCGAAAATACAAGTTTTGTGATGACAGGAAAAAATTTAGATGCTCTTTCCAAGTCCGATGTATTTGGAGAGAGTGCCA CTAAGTTGGTCACATTTTTTGAAACTTCGGAAGAACAGATCACGGGTTATCTTAGGTTCTGTCCTGCAAAGAAAATTGAA GTGGAATTGGTAACTCCAAACGTTGGCCGTAAAATACATTACATCCCTTGTCTCGGATCCTTTCGGTATTCTCCTTCATC TTATTTGTTAGAACAAAACCAACCTGTCTCTCTCTTCGGACCTCTAGAGTCGCATCCATACTTGCAAACATTACGTTCTT TGGGAACGATCTCATTTAGCATCAATCCGATTCTTCCCAATGGACTTGTTTTTGACGAGTCAACAGGTGTCGTATCGGGG ATTCCTACGGTAACGACGAAGAATGAATTTTTGGTTTTTACTGTTACGGCACAGTTAGATCAAAAGCCATTGGTCAAAAT CACATCTCCTCTAAAATTAATGGTTCTCACACCAGAAGAAAAAACGAACAGAACATGTAGGGCCATTTCTGCCACTTCGA CTTGTAATGTTCCTTCCCCATATACTTGTTTCAATAGTAGCCAATGTTTTACGAACCAAATGGCGTGTATCACGGATCCT CAATGCGGATTCTAA
Upstream 100 bases:
>100_bases GTTCCTCTTTTGTTTGGTGGAATGTTCAAAACCAAACACTCAGTCTCTTTCCCATTGGATCGCAAGTTTGGTCCTACTCG AAACTGACCAAACAAAAGAA
Downstream 100 bases:
>100_bases AGGAAACCACAAAACCTCTGTTTACAAATCAAATCCCATCCGAAACCATGTGATTGTCAGGTGGTCACAGAGTGAAGTAT TTTGGAATTTTAATCGTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MNVGAEEIPDEGRTSLYQIYSFTPDILIENTSFVMTGKNLDALSKSDVFGESATKLVTFFETSEEQITGYLRFCPAKKIE VELVTPNVGRKIHYIPCLGSFRYSPSSYLLEQNQPVSLFGPLESHPYLQTLRSLGTISFSINPILPNGLVFDESTGVVSG IPTVTTKNEFLVFTVTAQLDQKPLVKITSPLKLMVLTPEEKTNRTCRAISATSTCNVPSPYTCFNSSQCFTNQMACITDP QCGF
Sequences:
>Translated_244_residues MNVGAEEIPDEGRTSLYQIYSFTPDILIENTSFVMTGKNLDALSKSDVFGESATKLVTFFETSEEQITGYLRFCPAKKIE VELVTPNVGRKIHYIPCLGSFRYSPSSYLLEQNQPVSLFGPLESHPYLQTLRSLGTISFSINPILPNGLVFDESTGVVSG IPTVTTKNEFLVFTVTAQLDQKPLVKITSPLKLMVLTPEEKTNRTCRAISATSTCNVPSPYTCFNSSQCFTNQMACITDP QCGF >Mature_244_residues MNVGAEEIPDEGRTSLYQIYSFTPDILIENTSFVMTGKNLDALSKSDVFGESATKLVTFFETSEEQITGYLRFCPAKKIE VELVTPNVGRKIHYIPCLGSFRYSPSSYLLEQNQPVSLFGPLESHPYLQTLRSLGTISFSINPILPNGLVFDESTGVVSG IPTVTTKNEFLVFTVTAQLDQKPLVKITSPLKLMVLTPEEKTNRTCRAISATSTCNVPSPYTCFNSSQCFTNQMACITDP QCGF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26943; Mature: 26943
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVGAEEIPDEGRTSLYQIYSFTPDILIENTSFVMTGKNLDALSKSDVFGESATKLVTFF CCCCCHHCCCCCCCEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEE ETSEEQITGYLRFCPAKKIEVELVTPNVGRKIHYIPCLGSFRYSPSSYLLEQNQPVSLFG ECCHHHHEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHEECCCCCEEEEC PLESHPYLQTLRSLGTISFSINPILPNGLVFDESTGVVSGIPTVTTKNEFLVFTVTAQLD CCCCCHHHHHHHHCCEEEEEECCCCCCCEEEECCCCEEECCCCEEECCEEEEEEEEECCC QKPLVKITSPLKLMVLTPEEKTNRTCRAISATSTCNVPSPYTCFNSSQCFTNQMACITDP CCCEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEECCC QCGF CCCC >Mature Secondary Structure MNVGAEEIPDEGRTSLYQIYSFTPDILIENTSFVMTGKNLDALSKSDVFGESATKLVTFF CCCCCHHCCCCCCCEEEEEEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCEEEEEEE ETSEEQITGYLRFCPAKKIEVELVTPNVGRKIHYIPCLGSFRYSPSSYLLEQNQPVSLFG ECCHHHHEEEEEECCCCEEEEEEECCCCCCEEEEEECCCCCCCCCHHHEECCCCCEEEEC PLESHPYLQTLRSLGTISFSINPILPNGLVFDESTGVVSGIPTVTTKNEFLVFTVTAQLD CCCCCHHHHHHHHCCEEEEEECCCCCCCEEEECCCCEEECCCCEEECCEEEEEEEEECCC QKPLVKITSPLKLMVLTPEEKTNRTCRAISATSTCNVPSPYTCFNSSQCFTNQMACITDP CCCEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEECCC QCGF CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA