Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220434
Identifier: 183220434
GI number: 183220434
Start: 1072538
End: 1073743
Strand: Direct
Name: 183220434
Synonym: LEPBI_I1031
Alternate gene names: NA
Gene position: 1072538-1073743 (Clockwise)
Preceding gene: 183220433
Following gene: 183220435
Centisome position: 29.8
GC content: 38.39
Gene sequence:
>1206_bases GTGAAGTTTGAATCACTTTATCGTCATTTTTTGCTCACAAGAGCCACTCATATTCCCGTGACAAACGAGAAGGGAGATCT TGTCGGTTTACTTTCTAAAGACCGAGTCCATCGTGAATTGTCGGATCTTGGAAAAGAACGAGAAGATTTGGATCAAATCC CAATCGATATTTTGGAAACAGAACTAAACGAATCTGTTATTTTATACTTTAAGGAAACATCTCTCATCCCAGTGATTGGG CTCGATGGAGAAAAAAAAGAAACTTGGGACAAACCAAGATTCCTTGCGGCCTTTACCAAATTAGAATCCAAACAAATTCG CGATCCAAAACTGGATTCAATCGAATCCAAACTAGAGAAAAAAAAAGAAAATTTGGATTCCGTCCAGTGGTTTATGGAAC TCATCTTATCCCATTTCCCGGATGGACTGATTGCCACGGATGTGACCGGTGGTACTATATTTTATAATGAAAGTTTTGAA AATGGTATTCTCACAAAATCACTGTTTGGTGATTCGATTGAAACAGCTGAAAAGTATTTACACAACCTAAATCGGGAAGT ACTTGCTTCGTATCTCAAAGAACATGATTTGAGTATGGGGAAAGAAGCCGATACCAATGTATTAACAACGATGTTACCAG ACTTACAATCACAAGTGCGGATCATCACATTAAAAAAAGAGAAGAAAGTGGTTGGGTTTTTATACCATTTTGCAACGAGT GTGGGTGGGTTTGGGAATGGAAAAGGTAAGTCAGAATTCCCTGATTTGGATTTGGCCTTCCATTCCAAATTGCCATTAGA AACCGTTCTTGCAGAAATGGAAGCGCACTACATCCACAAATCCTTACAAAGGAATTCTCAAAATATTTCCCATGCGGCAA GTGAGCTCGGAATCCCGAGAACCACCTTACAAAACAGAATCCGTTTTTTGAATTTGGCAGAAAGGTTCCAAAACAACCAA AAGGAAAGAGTGGTCATCCCTAGAAAACGATCAGAAAAACAGGTAGCTCCCGAAAAAAAACCACTTCCAAAAAAGGGACA AAGCAAAAAACAATCAAGTTTGCCAAAGAAGAAATCCAAAAATACACAACAAAAACCAGTTAAATCAGCAAAACAAACGA CTCCCACTGAGAAAAAACAAGTAAAAGCGAAGAAAGGAACTCAAAACACTGGGAAACCTAGTAAAAAGGCAAAAAAAAGA CGTTGA
Upstream 100 bases:
>100_bases CATTTGGATGGGACTCCACAAACAAAAGCAAAACTCCATCCAAGAAAACTAAAAATTTTTTCATTTTCATTCACACCAAA TTTCAAAAAATGACTGCTTA
Downstream 100 bases:
>100_bases CGAAAACGCTCAGGAAAAGAAGTTTTTCATTACCGTTTGAGAAAACACCTCCGCACTTCGCTGTTTCACTTGCATACATA ACTTGCACAAATGGTTTCCC
Product: putative transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKFESLYRHFLLTRATHIPVTNEKGDLVGLLSKDRVHRELSDLGKEREDLDQIPIDILETELNESVILYFKETSLIPVIG LDGEKKETWDKPRFLAAFTKLESKQIRDPKLDSIESKLEKKKENLDSVQWFMELILSHFPDGLIATDVTGGTIFYNESFE NGILTKSLFGDSIETAEKYLHNLNREVLASYLKEHDLSMGKEADTNVLTTMLPDLQSQVRIITLKKEKKVVGFLYHFATS VGGFGNGKGKSEFPDLDLAFHSKLPLETVLAEMEAHYIHKSLQRNSQNISHAASELGIPRTTLQNRIRFLNLAERFQNNQ KERVVIPRKRSEKQVAPEKKPLPKKGQSKKQSSLPKKKSKNTQQKPVKSAKQTTPTEKKQVKAKKGTQNTGKPSKKAKKR R
Sequences:
>Translated_401_residues MKFESLYRHFLLTRATHIPVTNEKGDLVGLLSKDRVHRELSDLGKEREDLDQIPIDILETELNESVILYFKETSLIPVIG LDGEKKETWDKPRFLAAFTKLESKQIRDPKLDSIESKLEKKKENLDSVQWFMELILSHFPDGLIATDVTGGTIFYNESFE NGILTKSLFGDSIETAEKYLHNLNREVLASYLKEHDLSMGKEADTNVLTTMLPDLQSQVRIITLKKEKKVVGFLYHFATS VGGFGNGKGKSEFPDLDLAFHSKLPLETVLAEMEAHYIHKSLQRNSQNISHAASELGIPRTTLQNRIRFLNLAERFQNNQ KERVVIPRKRSEKQVAPEKKPLPKKGQSKKQSSLPKKKSKNTQQKPVKSAKQTTPTEKKQVKAKKGTQNTGKPSKKAKKR R >Mature_401_residues MKFESLYRHFLLTRATHIPVTNEKGDLVGLLSKDRVHRELSDLGKEREDLDQIPIDILETELNESVILYFKETSLIPVIG LDGEKKETWDKPRFLAAFTKLESKQIRDPKLDSIESKLEKKKENLDSVQWFMELILSHFPDGLIATDVTGGTIFYNESFE NGILTKSLFGDSIETAEKYLHNLNREVLASYLKEHDLSMGKEADTNVLTTMLPDLQSQVRIITLKKEKKVVGFLYHFATS VGGFGNGKGKSEFPDLDLAFHSKLPLETVLAEMEAHYIHKSLQRNSQNISHAASELGIPRTTLQNRIRFLNLAERFQNNQ KERVVIPRKRSEKQVAPEKKPLPKKGQSKKQSSLPKKKSKNTQQKPVKSAKQTTPTEKKQVKAKKGTQNTGKPSKKAKKR R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45715; Mature: 45715
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFESLYRHFLLTRATHIPVTNEKGDLVGLLSKDRVHRELSDLGKEREDLDQIPIDILET CCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH ELNESVILYFKETSLIPVIGLDGEKKETWDKPRFLAAFTKLESKQIRDPKLDSIESKLEK HCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KKENLDSVQWFMELILSHFPDGLIATDVTGGTIFYNESFENGILTKSLFGDSIETAEKYL HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHH HNLNREVLASYLKEHDLSMGKEADTNVLTTMLPDLQSQVRIITLKKEKKVVGFLYHFATS HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHH VGGFGNGKGKSEFPDLDLAFHSKLPLETVLAEMEAHYIHKSLQRNSQNISHAASELGIPR HCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH TTLQNRIRFLNLAERFQNNQKERVVIPRKRSEKQVAPEKKPLPKKGQSKKQSSLPKKKSK HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCC NTQQKPVKSAKQTTPTEKKQVKAKKGTQNTGKPSKKAKKRR CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCC >Mature Secondary Structure MKFESLYRHFLLTRATHIPVTNEKGDLVGLLSKDRVHRELSDLGKEREDLDQIPIDILET CCHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHH ELNESVILYFKETSLIPVIGLDGEKKETWDKPRFLAAFTKLESKQIRDPKLDSIESKLEK HCCCCEEEEEECCCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHH KKENLDSVQWFMELILSHFPDGLIATDVTGGTIFYNESFENGILTKSLFGDSIETAEKYL HHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCCCCCCCHHHHHHCCHHHHHHHHH HNLNREVLASYLKEHDLSMGKEADTNVLTTMLPDLQSQVRIITLKKEKKVVGFLYHFATS HHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHHH VGGFGNGKGKSEFPDLDLAFHSKLPLETVLAEMEAHYIHKSLQRNSQNISHAASELGIPR HCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH TTLQNRIRFLNLAERFQNNQKERVVIPRKRSEKQVAPEKKPLPKKGQSKKQSSLPKKKSK HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCC NTQQKPVKSAKQTTPTEKKQVKAKKGTQNTGKPSKKAKKRR CCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA