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The map label for this gene is ubiX [C]

Identifier: 183220427

GI number: 183220427

Start: 1067243

End: 1067839

Strand: Direct

Name: ubiX [C]

Synonym: LEPBI_I1024

Alternate gene names: 183220427

Gene position: 1067243-1067839 (Clockwise)

Preceding gene: 183220426

Following gene: 183220429

Centisome position: 29.65

GC content: 44.56

Gene sequence:

>597_bases
ATGAAACTCGTTGTGGGTCTTGCTGGGGCGAGTGGAAGCATTTATGCCGCAAGATTTTTAAAGGCTTTGTTTTCGATCGA
AGGTGAAACCTATATCACAGCAAGTCCTGCCTCACTTCGCATTTTTTCAGAAGAGTATGAAACCAGTGTCAAAACTACTG
AAGACATTTTATTGTTTGTGGAAGAGAAGTGGAAGGTAAAACCCAAACACAAATTCCATGTGCGCAATTTTTTGGATATT
GGATCAGACATTGCCAGTGGTTCCAATGTTTGGGATGCCATGGTTGTGATTCCTTGTAGCATGAAAACTGTGGCTTCGAT
GTCAGCAGGTCTTACGGAAAATTTAATTGAACGTGCGGCCGATGTGACACTCAAAGAAAGAAGGCGCCTCATTGTTGTGC
CAAGAGAAACTCCCTATAACCGCATCCACCTCCGCAATATGTTGGCTTTGGATGAAGCGGGTGCCATCCTCCTACCTGCA
TCTCCTGGGTTTTACCAAATGCCAAAAACATTGGATGATCTGGGTGATTTCATTGCAGGGAGGATTCTGAATTTACTTGG
CCATTCGCAAACCCTCTTCCCTAAGTGGGAGGGGTAA

Upstream 100 bases:

>100_bases
ACCAAATCAATTCCTGGATCAGTGTGGTTTTATTTTTAGCCATTCTCTTTGACAAATGGAATGAGTTTTTACTTAAAATT
TCTTCAGGGATCAGTTTTCG

Downstream 100 bases:

>100_bases
AGTTACGGAAATAGGCTGTGGGTTTTCCATTCTCACCTAAACACACGTAGGTGATGTCACTTTCAATCACGGCAGACATC
TTTCCCGTTTGGGGGTGGTT

Product: 3-octaprenyl-4-hydroxybenzoate carboxylyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKLVVGLAGASGSIYAARFLKALFSIEGETYITASPASLRIFSEEYETSVKTTEDILLFVEEKWKVKPKHKFHVRNFLDI
GSDIASGSNVWDAMVVIPCSMKTVASMSAGLTENLIERAADVTLKERRRLIVVPRETPYNRIHLRNMLALDEAGAILLPA
SPGFYQMPKTLDDLGDFIAGRILNLLGHSQTLFPKWEG

Sequences:

>Translated_198_residues
MKLVVGLAGASGSIYAARFLKALFSIEGETYITASPASLRIFSEEYETSVKTTEDILLFVEEKWKVKPKHKFHVRNFLDI
GSDIASGSNVWDAMVVIPCSMKTVASMSAGLTENLIERAADVTLKERRRLIVVPRETPYNRIHLRNMLALDEAGAILLPA
SPGFYQMPKTLDDLGDFIAGRILNLLGHSQTLFPKWEG
>Mature_198_residues
MKLVVGLAGASGSIYAARFLKALFSIEGETYITASPASLRIFSEEYETSVKTTEDILLFVEEKWKVKPKHKFHVRNFLDI
GSDIASGSNVWDAMVVIPCSMKTVASMSAGLTENLIERAADVTLKERRRLIVVPRETPYNRIHLRNMLALDEAGAILLPA
SPGFYQMPKTLDDLGDFIAGRILNLLGHSQTLFPKWEG

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=200, Percent_Identity=35, Blast_Score=125, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320746, Length=197, Percent_Identity=39.5939086294416, Blast_Score=143, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21986; Mature: 21986

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVVGLAGASGSIYAARFLKALFSIEGETYITASPASLRIFSEEYETSVKTTEDILLFV
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHCCCCCCCCEEEEE
EEKWKVKPKHKFHVRNFLDIGSDIASGSNVWDAMVVIPCSMKTVASMSAGLTENLIERAA
ECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHH
DVTLKERRRLIVVPRETPYNRIHLRNMLALDEAGAILLPASPGFYQMPKTLDDLGDFIAG
CCCHHCCCEEEEEECCCCCCHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH
RILNLLGHSQTLFPKWEG
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKLVVGLAGASGSIYAARFLKALFSIEGETYITASPASLRIFSEEYETSVKTTEDILLFV
CEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHCCCCCCCCEEEEE
EEKWKVKPKHKFHVRNFLDIGSDIASGSNVWDAMVVIPCSMKTVASMSAGLTENLIERAA
ECCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHCCHHHHHHHHHH
DVTLKERRRLIVVPRETPYNRIHLRNMLALDEAGAILLPASPGFYQMPKTLDDLGDFIAG
CCCHHCCCEEEEEECCCCCCHHHHHHHHEECCCCEEEEECCCCCCCCHHHHHHHHHHHHH
RILNLLGHSQTLFPKWEG
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]