Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220405
Identifier: 183220405
GI number: 183220405
Start: 1047204
End: 1047821
Strand: Direct
Name: 183220405
Synonym: LEPBI_I1001
Alternate gene names: NA
Gene position: 1047204-1047821 (Clockwise)
Preceding gene: 183220404
Following gene: 183220409
Centisome position: 29.09
GC content: 38.35
Gene sequence:
>618_bases ATGACAAATCCTTTTGGAATTGAAGTTCGATCCATACTCAGTGTCATTGCGATTTGGCTTACCTTTGTTGCCTACATTCC CTACTTAAAAGGAATCAAAGAGGGAAAAGTCCAACCTCATGTATTTTCATGGATCATTTGGGGAGCCACAACTTGTATCG TTTTTTTTGCACAATGGGTTGGGAATGGTGGCATTGGAACATTACCCATTGCCATCTCTGGGATCACAACATTTCTTGTT GCCCTTTTCGCTTACCATAAACGCGGTGAGATTAAAATTACGAAAGTGGATTGGTTCTTTTTTATTTTAGCTCTCTCGAG TTTACCATTTTGGTTTTTTTTCTCTAGTCCACTGGCTGCCGTGATTGTTTTGTCCATCGCTGATTCTCTTGGATTTATCC CCACCATTCGAAAGGGTTATACTTTGCCACATTCAGAACCACTTGGTTTTTATTTAATATTTTTAATCAGAAATACACTC GCTATCATAGCATTGGCCGAATGGAACCTAACTACTGTTTTGTTTCCTGGTTCGGCAGGCCTTGCTTGCCTTGTATTTGT TTTACTTGTAAAGTTTAGACAAAAACATCAAAAAAGTTTTTCAACTACTCTAGATTAG
Upstream 100 bases:
>100_bases GTGTGGATGCTATGGAAGAAGTGTATGGAAAAGTCATCGAAGCCATGAAAGGAAAAGTAAAAAAGACAACCATCTTTGAT TTGTTTTTTGATTTTATGCA
Downstream 100 bases:
>100_bases GTAGAGGGTAAAAGATCACAGATCGAACTTGTTTGCCATCTTCGGTTTCTTCGTAAGTGACTTCTGCTTGTTTGGATCTG ACTGGCAAATACAATTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MTNPFGIEVRSILSVIAIWLTFVAYIPYLKGIKEGKVQPHVFSWIIWGATTCIVFFAQWVGNGGIGTLPIAISGITTFLV ALFAYHKRGEIKITKVDWFFFILALSSLPFWFFFSSPLAAVIVLSIADSLGFIPTIRKGYTLPHSEPLGFYLIFLIRNTL AIIALAEWNLTTVLFPGSAGLACLVFVLLVKFRQKHQKSFSTTLD
Sequences:
>Translated_205_residues MTNPFGIEVRSILSVIAIWLTFVAYIPYLKGIKEGKVQPHVFSWIIWGATTCIVFFAQWVGNGGIGTLPIAISGITTFLV ALFAYHKRGEIKITKVDWFFFILALSSLPFWFFFSSPLAAVIVLSIADSLGFIPTIRKGYTLPHSEPLGFYLIFLIRNTL AIIALAEWNLTTVLFPGSAGLACLVFVLLVKFRQKHQKSFSTTLD >Mature_204_residues TNPFGIEVRSILSVIAIWLTFVAYIPYLKGIKEGKVQPHVFSWIIWGATTCIVFFAQWVGNGGIGTLPIAISGITTFLVA LFAYHKRGEIKITKVDWFFFILALSSLPFWFFFSSPLAAVIVLSIADSLGFIPTIRKGYTLPHSEPLGFYLIFLIRNTLA IIALAEWNLTTVLFPGSAGLACLVFVLLVKFRQKHQKSFSTTLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22868; Mature: 22737
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNPFGIEVRSILSVIAIWLTFVAYIPYLKGIKEGKVQPHVFSWIIWGATTCIVFFAQWV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GNGGIGTLPIAISGITTFLVALFAYHKRGEIKITKVDWFFFILALSSLPFWFFFSSPLAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHH VIVLSIADSLGFIPTIRKGYTLPHSEPLGFYLIFLIRNTLAIIALAEWNLTTVLFPGSAG HHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCC LACLVFVLLVKFRQKHQKSFSTTLD HHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TNPFGIEVRSILSVIAIWLTFVAYIPYLKGIKEGKVQPHVFSWIIWGATTCIVFFAQWV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GNGGIGTLPIAISGITTFLVALFAYHKRGEIKITKVDWFFFILALSSLPFWFFFSSPLAA CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCHHHHHHHHHHH VIVLSIADSLGFIPTIRKGYTLPHSEPLGFYLIFLIRNTLAIIALAEWNLTTVLFPGSAG HHHHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCEEEEEECCCCC LACLVFVLLVKFRQKHQKSFSTTLD HHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA