Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220376
Identifier: 183220376
GI number: 183220376
Start: 1007999
End: 1009099
Strand: Reverse
Name: 183220376
Synonym: LEPBI_I0972
Alternate gene names: NA
Gene position: 1009099-1007999 (Counterclockwise)
Preceding gene: 183220377
Following gene: 183220367
Centisome position: 28.03
GC content: 37.87
Gene sequence:
>1101_bases ATGAGTTACCGCGTCAAACTACCAATCTTAATTGGCCTGATTAGTTTTTTATTTTTTTTCATACACTTTCACTTTGCCGA ATTTACCTTCCTACATTGGCAAAATCCGAAAGGGGAAAACACTCTCAATTTTAATTTGGTTGGGATTTATAGCTCTTTTC TTTTGGCATTGTGTATTAGTTTTATCGTATATTATTTTCTTGGATTTTTATACCAATACATCCTTCACATTGTCTTTCAT ATCCAAGATAGCGAAAATGAAATTCCCAAAGACATACGAAACCTAAATCGAAATTCCGATGAATACAAAATATACAAATC GGTAATGTTCACTCTTTTGCAAGGGGAAGAAGGACTTGGAGAAGAACAGTTTGAAAACAAATTTGATTGGAAAACAATCC AAGCCGCCTCAGTAAACAAACAAATCCCAGATATCAAAATTCCGAGTACACCAGGATTTGATGTTGCGGTGTTTCCATCT GTCATGCGTTATGCGGGTGCTGATTATATCCGAATTGTACGAGCAAAAGACGGATTATTTGGAATCATTGCTGGTCATAT GGAACCAGGAATTTTGGAATCCTCGGAAAAGGTATTCATTCATGGGATTGTCTCTTCGTTTGGAGAAGGACTTTTTTCCA CAGAAGAATTATTAACCAAATTAAAATTTGCTCTCCATCAATTTGCTTTCTTAAAATTAAAACTCTCTGCGTTTGTGATC CAAAACAAAGATGATAAAATGTCTTTTTTACATTACATGGACATGCCCATCTTTCAATTTTCGGACCACGGCATCCAAGT GATTGAAGGCAGTGGGGATGACCATTGGTATCCCAATCACAAACATCCGATTTCAATAGCCGATGGGATTGAGATTGGGG ATTATTTGGTTTGGGCGAGTGACCGCACTCTCACCCAATTTGGACTCACATCCTTTGAAATCATGGAAGAATTTGTGGAT TACCTACTCGACCTAAGGCCAAGTTCTTCTAGACAGATGTTACTTGCCATTGCCAAAAAGATGAGTTCCCTCGGGCGCGA ACGAAATCTCACAAATCCCATGGAAAAACTGTCCATCTTAGTGGTTCGTAGAAACAAGTAA
Upstream 100 bases:
>100_bases GGCCTGATGTATTTTCCATGCTCATGTTACTTGTTCCACTGAGCTTTTTATTCTTTTTGTCTGCACTGATGATGAAAGTA TTGGAGACCACGGATTCAAA
Downstream 100 bases:
>100_bases TCGTATCGTATGGCGGAGTAAATCCAGTTTCCCCCAGTTCCCATGCCCTGGCACCACAACTTCTGCGTCAGGGTAACGAG ATAACACTCGTTTCACTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSYRVKLPILIGLISFLFFFIHFHFAEFTFLHWQNPKGENTLNFNLVGIYSSFLLALCISFIVYYFLGFLYQYILHIVFH IQDSENEIPKDIRNLNRNSDEYKIYKSVMFTLLQGEEGLGEEQFENKFDWKTIQAASVNKQIPDIKIPSTPGFDVAVFPS VMRYAGADYIRIVRAKDGLFGIIAGHMEPGILESSEKVFIHGIVSSFGEGLFSTEELLTKLKFALHQFAFLKLKLSAFVI QNKDDKMSFLHYMDMPIFQFSDHGIQVIEGSGDDHWYPNHKHPISIADGIEIGDYLVWASDRTLTQFGLTSFEIMEEFVD YLLDLRPSSSRQMLLAIAKKMSSLGRERNLTNPMEKLSILVVRRNK
Sequences:
>Translated_366_residues MSYRVKLPILIGLISFLFFFIHFHFAEFTFLHWQNPKGENTLNFNLVGIYSSFLLALCISFIVYYFLGFLYQYILHIVFH IQDSENEIPKDIRNLNRNSDEYKIYKSVMFTLLQGEEGLGEEQFENKFDWKTIQAASVNKQIPDIKIPSTPGFDVAVFPS VMRYAGADYIRIVRAKDGLFGIIAGHMEPGILESSEKVFIHGIVSSFGEGLFSTEELLTKLKFALHQFAFLKLKLSAFVI QNKDDKMSFLHYMDMPIFQFSDHGIQVIEGSGDDHWYPNHKHPISIADGIEIGDYLVWASDRTLTQFGLTSFEIMEEFVD YLLDLRPSSSRQMLLAIAKKMSSLGRERNLTNPMEKLSILVVRRNK >Mature_365_residues SYRVKLPILIGLISFLFFFIHFHFAEFTFLHWQNPKGENTLNFNLVGIYSSFLLALCISFIVYYFLGFLYQYILHIVFHI QDSENEIPKDIRNLNRNSDEYKIYKSVMFTLLQGEEGLGEEQFENKFDWKTIQAASVNKQIPDIKIPSTPGFDVAVFPSV MRYAGADYIRIVRAKDGLFGIIAGHMEPGILESSEKVFIHGIVSSFGEGLFSTEELLTKLKFALHQFAFLKLKLSAFVIQ NKDDKMSFLHYMDMPIFQFSDHGIQVIEGSGDDHWYPNHKHPISIADGIEIGDYLVWASDRTLTQFGLTSFEIMEEFVDY LLDLRPSSSRQMLLAIAKKMSSLGRERNLTNPMEKLSILVVRRNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42238; Mature: 42107
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYRVKLPILIGLISFLFFFIHFHFAEFTFLHWQNPKGENTLNFNLVGIYSSFLLALCIS CCEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHH FIVYYFLGFLYQYILHIVFHIQDSENEIPKDIRNLNRNSDEYKIYKSVMFTLLQGEEGLG HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC EEQFENKFDWKTIQAASVNKQIPDIKIPSTPGFDVAVFPSVMRYAGADYIRIVRAKDGLF HHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEE GIIAGHMEPGILESSEKVFIHGIVSSFGEGLFSTEELLTKLKFALHQFAFLKLKLSAFVI EEEECCCCCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE QNKDDKMSFLHYMDMPIFQFSDHGIQVIEGSGDDHWYPNHKHPISIADGIEIGDYLVWAS ECCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCEEECCCCEECCEEEEEC DRTLTQFGLTSFEIMEEFVDYLLDLRPSSSRQMLLAIAKKMSSLGRERNLTNPMEKLSIL CCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEE VVRRNK EEECCC >Mature Secondary Structure SYRVKLPILIGLISFLFFFIHFHFAEFTFLHWQNPKGENTLNFNLVGIYSSFLLALCIS CEEEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEEEHHHHHHHHHHHHHH FIVYYFLGFLYQYILHIVFHIQDSENEIPKDIRNLNRNSDEYKIYKSVMFTLLQGEEGLG HHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC EEQFENKFDWKTIQAASVNKQIPDIKIPSTPGFDVAVFPSVMRYAGADYIRIVRAKDGLF HHHHHCCCCCCEEEHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEE GIIAGHMEPGILESSEKVFIHGIVSSFGEGLFSTEELLTKLKFALHQFAFLKLKLSAFVI EEEECCCCCCCCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE QNKDDKMSFLHYMDMPIFQFSDHGIQVIEGSGDDHWYPNHKHPISIADGIEIGDYLVWAS ECCCCHHHHHHHHCCCCEEECCCCEEEEECCCCCCCCCCCCCCEEECCCCEECCEEEEEC DRTLTQFGLTSFEIMEEFVDYLLDLRPSSSRQMLLAIAKKMSSLGRERNLTNPMEKLSIL CCCHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEEE VVRRNK EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA