| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220360
Identifier: 183220360
GI number: 183220360
Start: 989240
End: 990109
Strand: Reverse
Name: 183220360
Synonym: LEPBI_I0956
Alternate gene names: NA
Gene position: 990109-989240 (Counterclockwise)
Preceding gene: 183220361
Following gene: 183220359
Centisome position: 27.51
GC content: 41.38
Gene sequence:
>870_bases TTGTTTACAGGCATAACAAATGCCCTATGCTCATTTTCTATGAAAACCCTACTCCCATTCCTTCTTTTGGCTGCCTTTGG ATGTTCACAATTGGTATGGCGTGATTCCCAACTCACAGATGAAATTTCTCCCAGTAATGATCCGAATATCAATCTTGTCC TGACAGTTCACTACCAAGAAAAAGATTCATGGAACCCTCTCAATGGAACCACTGACAAACGGAATTATAAAAGCAAAATC AAACTCATTGAGAATGCAGGCACTGGTGGGAAAGTCCTTCGGGAATGGGACTTACCATCCTGGTCGTTAGGTGATGGAAT CTTTTATCATACCAAATCAAACACATTATTTGTGTTATACGGAAAAGATGATGAATATGGTACACTCAACCAAACCCTTT CCATTTATCCAGAAGTAGGCGGGGCATTTTCTTACCCTGCCACTCCCGAAAAAAAAATCATCTTCCAAATGGCACCATCT CCGAATGGAAATTTAGTCGCTCTCATTACGGCAAATCCCACAAAAGAAGATGAATTCACAGAATTTGAACTTTCGATCTT ACAAACCAAAGACAAAAAAGTGCAATCCTTCCCACTCAGTTTTTGGACAGCACTCCCATTGTATGGAATTCGTTGGGCAG AAGATGGGAACAAATTGTATGTCAGGACACCTGATCGCATTTTGGTTTGGAATGGAACGGAATTGGTGGAAACCAAATCC TTCCCAGATTGTTTTACCATTTCCACAAACTTCGGGAAATGGGCCTATGAATCCGCAACTCTCACCGAAGGGGGCAATGT TGTACTTGGGAAAAAATTGCCTACTCCCAAACAGATCACAAATATCGACCAAATCAAACTCTGCCGCTAA
Upstream 100 bases:
>100_bases AATCGACCAAAAGAATAAAGAAAAGGCAAAAGCAAAAAAAGGAAAATAAAACCTTTTCTTGGCACTTTTCTAACTGAGAG GGGACAACAGGTCCCCTTTT
Downstream 100 bases:
>100_bases AAGGCAGAGAGAATATTCAACTCAGGTTCTCTCTCTGGGCCAGTTTTTGGTCTCAATTCGCTTGATTTAATTATGTCACA TGATTGGATGAGTGAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFTGITNALCSFSMKTLLPFLLLAAFGCSQLVWRDSQLTDEISPSNDPNINLVLTVHYQEKDSWNPLNGTTDKRNYKSKI KLIENAGTGGKVLREWDLPSWSLGDGIFYHTKSNTLFVLYGKDDEYGTLNQTLSIYPEVGGAFSYPATPEKKIIFQMAPS PNGNLVALITANPTKEDEFTEFELSILQTKDKKVQSFPLSFWTALPLYGIRWAEDGNKLYVRTPDRILVWNGTELVETKS FPDCFTISTNFGKWAYESATLTEGGNVVLGKKLPTPKQITNIDQIKLCR
Sequences:
>Translated_289_residues MFTGITNALCSFSMKTLLPFLLLAAFGCSQLVWRDSQLTDEISPSNDPNINLVLTVHYQEKDSWNPLNGTTDKRNYKSKI KLIENAGTGGKVLREWDLPSWSLGDGIFYHTKSNTLFVLYGKDDEYGTLNQTLSIYPEVGGAFSYPATPEKKIIFQMAPS PNGNLVALITANPTKEDEFTEFELSILQTKDKKVQSFPLSFWTALPLYGIRWAEDGNKLYVRTPDRILVWNGTELVETKS FPDCFTISTNFGKWAYESATLTEGGNVVLGKKLPTPKQITNIDQIKLCR >Mature_289_residues MFTGITNALCSFSMKTLLPFLLLAAFGCSQLVWRDSQLTDEISPSNDPNINLVLTVHYQEKDSWNPLNGTTDKRNYKSKI KLIENAGTGGKVLREWDLPSWSLGDGIFYHTKSNTLFVLYGKDDEYGTLNQTLSIYPEVGGAFSYPATPEKKIIFQMAPS PNGNLVALITANPTKEDEFTEFELSILQTKDKKVQSFPLSFWTALPLYGIRWAEDGNKLYVRTPDRILVWNGTELVETKS FPDCFTISTNFGKWAYESATLTEGGNVVLGKKLPTPKQITNIDQIKLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32474; Mature: 32474
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTGITNALCSFSMKTLLPFLLLAAFGCSQLVWRDSQLTDEISPSNDPNINLVLTVHYQE CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCEEEEEEEEEEC KDSWNPLNGTTDKRNYKSKIKLIENAGTGGKVLREWDLPSWSLGDGIFYHTKSNTLFVLY CCCCCCCCCCCCCCCHHCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEE GKDDEYGTLNQTLSIYPEVGGAFSYPATPEKKIIFQMAPSPNGNLVALITANPTKEDEFT CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCE EFELSILQTKDKKVQSFPLSFWTALPLYGIRWAEDGNKLYVRTPDRILVWNGTELVETKS EEEEEEEECCCCHHHHCCHHHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCEEEECCC FPDCFTISTNFGKWAYESATLTEGGNVVLGKKLPTPKQITNIDQIKLCR CCCEEEEECCCCCEEECCEEEECCCCEEEECCCCCCHHHCCCCCEEECC >Mature Secondary Structure MFTGITNALCSFSMKTLLPFLLLAAFGCSQLVWRDSQLTDEISPSNDPNINLVLTVHYQE CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCEEEEEEEEEEC KDSWNPLNGTTDKRNYKSKIKLIENAGTGGKVLREWDLPSWSLGDGIFYHTKSNTLFVLY CCCCCCCCCCCCCCCHHCEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEE GKDDEYGTLNQTLSIYPEVGGAFSYPATPEKKIIFQMAPSPNGNLVALITANPTKEDEFT CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCE EFELSILQTKDKKVQSFPLSFWTALPLYGIRWAEDGNKLYVRTPDRILVWNGTELVETKS EEEEEEEECCCCHHHHCCHHHHHHCCCCEEEEECCCCEEEEECCCEEEEECCCEEEECCC FPDCFTISTNFGKWAYESATLTEGGNVVLGKKLPTPKQITNIDQIKLCR CCCEEEEECCCCCEEECCEEEECCCCEEEECCCCCCHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA