| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220357
Identifier: 183220357
GI number: 183220357
Start: 983845
End: 984444
Strand: Reverse
Name: 183220357
Synonym: LEPBI_I0953
Alternate gene names: NA
Gene position: 984444-983845 (Counterclockwise)
Preceding gene: 183220359
Following gene: 183220356
Centisome position: 27.35
GC content: 36.5
Gene sequence:
>600_bases GTGAAACGATTTCGGTTTAGTTTGGAAACGGTTTTAAAACTACGAGGCATGAAGGAAGAGGAAGAGATCCGCCGTCTGTC CCTTGTGGTTTCCAAACTGAATGCTCTCATTTCCGAAAAAGAAAATAACGAAACAGAAATCCAATCATCTTACGATGCCA TCCTTTCTTCTGCCCAAGTGGGAACCAGTTTATCAGACTACCTTTCCATCGAACAATACATCAAAGGCCTCATCCGACGT AACGAAGAATTAGACCATAGAATTCAAAACCAAACAGAAGAGGTCAATTTAGTTCGGAAAGATGTGATGGTGGCAAGGAT GAATAAAAAAGTCATCGAAGTCTTAAAAGACAAACGTTTTTTAGAATGGAAAAAAAAACGAAATCGTATGGAACGAAGGG AAGTAGAAGAATTCAATTTCCAATTAAGCAAACAAACATTATTTGATTCTTTAGAAAGTTACGGCTCAAAACATTCCAAA AAAATCCCAAGAACTTTCAAAATTTTAAACAGAGAAGATGGTGGAGACGAACTCGCATCTGATTTTAAAACTCTCCGCGA TTTTTATGAAAAATATTATTTAGGACAAGGCAAACCATAA
Upstream 100 bases:
>100_bases TAAGTATTTATGGGACAATATTCCAAGTTTTACGTATTTTTTTAAAAATACGAGTAAAAAAGAGTACAAAAATTATTTAG AATCGAAGAAATAGACAGCT
Downstream 100 bases:
>100_bases TGGCAAGCGTAACAGACAACACAAGATCCTTCTTTTTGATTGTATTAATTTTTTTCCTTATCGCAATTGGATTTTTTGTT TTTGACTACTTCCAAGTCAT
Product: putative flagellar protein FliJ
Products: NA
Alternate protein names: Flagellar Protein FliJ
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MKRFRFSLETVLKLRGMKEEEEIRRLSLVVSKLNALISEKENNETEIQSSYDAILSSAQVGTSLSDYLSIEQYIKGLIRR NEELDHRIQNQTEEVNLVRKDVMVARMNKKVIEVLKDKRFLEWKKKRNRMERREVEEFNFQLSKQTLFDSLESYGSKHSK KIPRTFKILNREDGGDELASDFKTLRDFYEKYYLGQGKP
Sequences:
>Translated_199_residues MKRFRFSLETVLKLRGMKEEEEIRRLSLVVSKLNALISEKENNETEIQSSYDAILSSAQVGTSLSDYLSIEQYIKGLIRR NEELDHRIQNQTEEVNLVRKDVMVARMNKKVIEVLKDKRFLEWKKKRNRMERREVEEFNFQLSKQTLFDSLESYGSKHSK KIPRTFKILNREDGGDELASDFKTLRDFYEKYYLGQGKP >Mature_199_residues MKRFRFSLETVLKLRGMKEEEEIRRLSLVVSKLNALISEKENNETEIQSSYDAILSSAQVGTSLSDYLSIEQYIKGLIRR NEELDHRIQNQTEEVNLVRKDVMVARMNKKVIEVLKDKRFLEWKKKRNRMERREVEEFNFQLSKQTLFDSLESYGSKHSK KIPRTFKILNREDGGDELASDFKTLRDFYEKYYLGQGKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23667; Mature: 23667
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFRFSLETVLKLRGMKEEEEIRRLSLVVSKLNALISEKENNETEIQSSYDAILSSAQV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GTSLSDYLSIEQYIKGLIRRNEELDHRIQNQTEEVNLVRKDVMVARMNKKVIEVLKDKRF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEWKKKRNRMERREVEEFNFQLSKQTLFDSLESYGSKHSKKIPRTFKILNREDGGDELAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCCHHHHHH DFKTLRDFYEKYYLGQGKP HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKRFRFSLETVLKLRGMKEEEEIRRLSLVVSKLNALISEKENNETEIQSSYDAILSSAQV CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH GTSLSDYLSIEQYIKGLIRRNEELDHRIQNQTEEVNLVRKDVMVARMNKKVIEVLKDKRF CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LEWKKKRNRMERREVEEFNFQLSKQTLFDSLESYGSKHSKKIPRTFKILNREDGGDELAS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHCCCCCHHHHHH DFKTLRDFYEKYYLGQGKP HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA