Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183220304
Identifier: 183220304
GI number: 183220304
Start: 921428
End: 922375
Strand: Direct
Name: 183220304
Synonym: LEPBI_I0899
Alternate gene names: NA
Gene position: 921428-922375 (Clockwise)
Preceding gene: 183220303
Following gene: 183220305
Centisome position: 25.6
GC content: 39.45
Gene sequence:
>948_bases ATGAAACGAATATTCGTTTTTCTTTTGGTCATTTTGACTCTATTGGCCACTTCCATCCAAGCCCAAGGGAAGGTAGAAGG TAACACTTTACGCATAAAGGGTGGATTGTTTTTAGGAAGCCTGCGCACAGATTTAGAAAAAAGAAATTTTTACGGTGATA TTGTTCGGACAGAATACAACCAAGAGTGGCAAAACAATGGCTCGATCAGTCTCATCAATGATTGGGGGTTTGATTATTTC CAATCGGTAAATGCAGGCATTCTATCCAATGTATTCCTTGGTCTCCACTTGAATCGGTTTGGACGCGGATATGAATGGAA TTCATTTTATCCTGTAGGGCTTGGGATCAAAGAAGCTGACTATCGTTTGCTTTACTCCGATATCAATTTAGGTGTGACCC TCACTCCTACTTCCAATTTTCGAATCCTTCCAAAGTATGTATTGCGGAGTATGAGCCAAACCTTAGAAGGCACCTACTTA GGGATAGGAGGTCCAGCATACTACGGACAAGATACAAAAACCACAACAGGAACTTCTGGTTTGCTTGGTGTTGGAATTGA ATTTGATCTGAACGATCGTGCCACTCTCTTTGCAGATTTTTTACTCTTTGGTCCATTCCTCTTAAACTCATCAGGATTGT ATAGTTCTGAACAATTCCGAATCTCTAATGGAGGATTTTCATATAATTATGCAAACGGTGGTTATACGTTCCATTCCGAA AAGTTAAGTTTTGGTGCAAGCGTTGTGATAGTTCCGAAACTCCGATTGTTTTTAAGTTTTGAACGAGAATACATGAATGC CAAAGCAAAGAGTCCAGTTGCTTTTAGTTTCGATGGAGACAATCTTTCTTCTGTTGGAACTTTGATGGAATTTGTTTCAG CCACAGCAGACCACAGAATCGAAATTTCCGGTCTAAAATTTGGTGCTACATACGATTTAAATTTGTAA
Upstream 100 bases:
>100_bases TTCATTAGGGATTTCTAGCAACAAAACGAATCTCTTTTAAAAAATTTCCTTGAGTGGTCATCATTTCATTTGTTATTGGA TGAGAGAGGTAATTCAAATC
Downstream 100 bases:
>100_bases CTTTTCTTTAAATTGTACTTGCGATTCCAGCCCAGCTAGGAGTAATGGTAATTACTCCTGGTGATTATGGAGAGAAGGCC ATACCCGTTCCCATTCCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKRIFVFLLVILTLLATSIQAQGKVEGNTLRIKGGLFLGSLRTDLEKRNFYGDIVRTEYNQEWQNNGSISLINDWGFDYF QSVNAGILSNVFLGLHLNRFGRGYEWNSFYPVGLGIKEADYRLLYSDINLGVTLTPTSNFRILPKYVLRSMSQTLEGTYL GIGGPAYYGQDTKTTTGTSGLLGVGIEFDLNDRATLFADFLLFGPFLLNSSGLYSSEQFRISNGGFSYNYANGGYTFHSE KLSFGASVVIVPKLRLFLSFEREYMNAKAKSPVAFSFDGDNLSSVGTLMEFVSATADHRIEISGLKFGATYDLNL
Sequences:
>Translated_315_residues MKRIFVFLLVILTLLATSIQAQGKVEGNTLRIKGGLFLGSLRTDLEKRNFYGDIVRTEYNQEWQNNGSISLINDWGFDYF QSVNAGILSNVFLGLHLNRFGRGYEWNSFYPVGLGIKEADYRLLYSDINLGVTLTPTSNFRILPKYVLRSMSQTLEGTYL GIGGPAYYGQDTKTTTGTSGLLGVGIEFDLNDRATLFADFLLFGPFLLNSSGLYSSEQFRISNGGFSYNYANGGYTFHSE KLSFGASVVIVPKLRLFLSFEREYMNAKAKSPVAFSFDGDNLSSVGTLMEFVSATADHRIEISGLKFGATYDLNL >Mature_315_residues MKRIFVFLLVILTLLATSIQAQGKVEGNTLRIKGGLFLGSLRTDLEKRNFYGDIVRTEYNQEWQNNGSISLINDWGFDYF QSVNAGILSNVFLGLHLNRFGRGYEWNSFYPVGLGIKEADYRLLYSDINLGVTLTPTSNFRILPKYVLRSMSQTLEGTYL GIGGPAYYGQDTKTTTGTSGLLGVGIEFDLNDRATLFADFLLFGPFLLNSSGLYSSEQFRISNGGFSYNYANGGYTFHSE KLSFGASVVIVPKLRLFLSFEREYMNAKAKSPVAFSFDGDNLSSVGTLMEFVSATADHRIEISGLKFGATYDLNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35039; Mature: 35039
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIFVFLLVILTLLATSIQAQGKVEGNTLRIKGGLFLGSLRTDLEKRNFYGDIVRTEYN CHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCEEEEHHHHHHHHCCCCCCEEECCCC QEWQNNGSISLINDWGFDYFQSVNAGILSNVFLGLHLNRFGRGYEWNSFYPVGLGIKEAD HHHCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHEEHHHCCCCCCCCCEEEECCCCCCCC YRLLYSDINLGVTLTPTSNFRILPKYVLRSMSQTLEGTYLGIGGPAYYGQDTKTTTGTSG EEEEEEECCCCEEECCCCCCEECHHHHHHHHHHHHCCEEEECCCCEECCCCCCCCCCCCC LLGVGIEFDLNDRATLFADFLLFGPFLLNSSGLYSSEQFRISNGGFSYNYANGGYTFHSE EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCEEEECC KLSFGASVVIVPKLRLFLSFEREYMNAKAKSPVAFSFDGDNLSSVGTLMEFVSATADHRI CCCCCCEEEEECCEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEE EISGLKFGATYDLNL EEEEEEECEEEECCC >Mature Secondary Structure MKRIFVFLLVILTLLATSIQAQGKVEGNTLRIKGGLFLGSLRTDLEKRNFYGDIVRTEYN CHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEECCEEEEHHHHHHHHCCCCCCEEECCCC QEWQNNGSISLINDWGFDYFQSVNAGILSNVFLGLHLNRFGRGYEWNSFYPVGLGIKEAD HHHCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHEEHHHCCCCCCCCCEEEECCCCCCCC YRLLYSDINLGVTLTPTSNFRILPKYVLRSMSQTLEGTYLGIGGPAYYGQDTKTTTGTSG EEEEEEECCCCEEECCCCCCEECHHHHHHHHHHHHCCEEEECCCCEECCCCCCCCCCCCC LLGVGIEFDLNDRATLFADFLLFGPFLLNSSGLYSSEQFRISNGGFSYNYANGGYTFHSE EEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCCCEEEECC KLSFGASVVIVPKLRLFLSFEREYMNAKAKSPVAFSFDGDNLSSVGTLMEFVSATADHRI CCCCCCEEEEECCEEEHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCEE EISGLKFGATYDLNL EEEEEEECEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA