| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220248
Identifier: 183220248
GI number: 183220248
Start: 853519
End: 854892
Strand: Direct
Name: 183220248
Synonym: LEPBI_I0841
Alternate gene names: NA
Gene position: 853519-854892 (Clockwise)
Preceding gene: 183220245
Following gene: 183220249
Centisome position: 23.71
GC content: 45.49
Gene sequence:
>1374_bases ATGAAAAACCGCAGGCTTCTATCCCTCACCTTATTCCTATCGGCCATTGCCCCCTCCATTCTTTTGTCGCAAAATTTGAA ATTTAGATCCGTACGGATTTGGGACAGTGAAAAAGCAAATTTTTCCGGATTTGTCGATGTCGATGTGAACCAAGGGAAAA TTGTTTCGATCAAAAACGCGAAAGAAACCAAAAATCCAGAATACCTACTACCTGGATTCTGTGATGCTTCTGTGACTCTT GGGACCAACTCTCTCGGTGGCAAGACCACAAGGACGGAATTCCCAAAAGTACTTTCTGGTTTTTTATCAGCAGGATTTAG CCATATTGAGTCCGTTGCTGATCCCAATCTTTCCGCTCTTTCCACTGAGATCTCCAAATCCAAATGGAATGCACCCATTC TCAGCCAATCACAAAAACCTCATTTGTATCCAGAGCTTCCATTGGGTGAGGGAGCCATTTACCAATCGGGTCTCAAAGGG AATGTTGACCCCAAACGGAATCGTCATGTTCCTATTTTTCTAAAGGAAAATGAAAACAAAGGATTTTCACAAACCGAACT TTTTTCCAAACGAAAAGAATTAGAAACAAATGGGCAATTGGCAGTGGCCTATACCTTTGCCGATCAAACCAGTTGGGAAG ATGCCCTAGACACGGGTTTTTCTGTCCTCTTCCACCCCATGCCAGAAGGGACCAATCTCTTCCGTGCCCAAAAACGAGAT TTTTTATGGGCACCTCTTTTTGGCATCGTGTACCTCCAAGAATTACGCGGGAAACCAGACGAGTGGAAGGAAGAACAAAA AATCTGGTCAGAACTGAACCCTCATTTTGGAAAAACATGGAAGGAGAGTTTGGTTCTAGACGGAGAAAATCTGGCAACCG AATCCAATTTGCCATTTTCCGTTTATGCATCTCAGTTCCGTTTGGAAAAAGAAACCCACTCCCATCTCCTCTTTGCGAGT GGAGCAGGGCATTTTGGACTCTTCTCTGGGCAAGCGGCTGTGGTCGAAGTCAGGTTATGGGAATCCTTATTACAGGAAAC GGAGAAAAAGTCAGAACATCCCAAGGACAGAGCCGTCCCGTTTTGGGAATCACTCTTCGGACAAAAATCCCTCACCCTCC TTCCCATTCAAAATGACGAAGAAAGCCTTCCCCGAGTGCGGCGCCGGATCATCCAAACCCTGACGGAAACCACCTGCCAA TATGTGGGTGCCGATCATGGAGGGAAACTCAGAGTGGGTGGTCCTGCTCATTTTTCCGTCCTTGCAGAAAATCCTCTGAA ACGCACCTCCGGAATATTTCCAATTGAATCCATGGTATTAGGAGGAAAATTGGTATATACCTCCAAACCCACCAAGGAAG GAACCGCAAAATGA
Upstream 100 bases:
>100_bases TATGTAATTTGATGTGATCAGAAATCTCGCTTGTTTCCTTTCCCATACCCGAAATCTTTTCCATTCTAGTCCTTACTGTC AAGGTACTAAGACCGCTAGT
Downstream 100 bases:
>100_bases AAGGCCCATCCTCAGAATTTGATCGATTATTAGAAGAAAGTTTTAAAAAAAGACAATCCATTGAACCCGGCTCGCGTCAC GAAGCCAAAGTAACAGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 457; Mature: 457
Protein sequence:
>457_residues MKNRRLLSLTLFLSAIAPSILLSQNLKFRSVRIWDSEKANFSGFVDVDVNQGKIVSIKNAKETKNPEYLLPGFCDASVTL GTNSLGGKTTRTEFPKVLSGFLSAGFSHIESVADPNLSALSTEISKSKWNAPILSQSQKPHLYPELPLGEGAIYQSGLKG NVDPKRNRHVPIFLKENENKGFSQTELFSKRKELETNGQLAVAYTFADQTSWEDALDTGFSVLFHPMPEGTNLFRAQKRD FLWAPLFGIVYLQELRGKPDEWKEEQKIWSELNPHFGKTWKESLVLDGENLATESNLPFSVYASQFRLEKETHSHLLFAS GAGHFGLFSGQAAVVEVRLWESLLQETEKKSEHPKDRAVPFWESLFGQKSLTLLPIQNDEESLPRVRRRIIQTLTETTCQ YVGADHGGKLRVGGPAHFSVLAENPLKRTSGIFPIESMVLGGKLVYTSKPTKEGTAK
Sequences:
>Translated_457_residues MKNRRLLSLTLFLSAIAPSILLSQNLKFRSVRIWDSEKANFSGFVDVDVNQGKIVSIKNAKETKNPEYLLPGFCDASVTL GTNSLGGKTTRTEFPKVLSGFLSAGFSHIESVADPNLSALSTEISKSKWNAPILSQSQKPHLYPELPLGEGAIYQSGLKG NVDPKRNRHVPIFLKENENKGFSQTELFSKRKELETNGQLAVAYTFADQTSWEDALDTGFSVLFHPMPEGTNLFRAQKRD FLWAPLFGIVYLQELRGKPDEWKEEQKIWSELNPHFGKTWKESLVLDGENLATESNLPFSVYASQFRLEKETHSHLLFAS GAGHFGLFSGQAAVVEVRLWESLLQETEKKSEHPKDRAVPFWESLFGQKSLTLLPIQNDEESLPRVRRRIIQTLTETTCQ YVGADHGGKLRVGGPAHFSVLAENPLKRTSGIFPIESMVLGGKLVYTSKPTKEGTAK >Mature_457_residues MKNRRLLSLTLFLSAIAPSILLSQNLKFRSVRIWDSEKANFSGFVDVDVNQGKIVSIKNAKETKNPEYLLPGFCDASVTL GTNSLGGKTTRTEFPKVLSGFLSAGFSHIESVADPNLSALSTEISKSKWNAPILSQSQKPHLYPELPLGEGAIYQSGLKG NVDPKRNRHVPIFLKENENKGFSQTELFSKRKELETNGQLAVAYTFADQTSWEDALDTGFSVLFHPMPEGTNLFRAQKRD FLWAPLFGIVYLQELRGKPDEWKEEQKIWSELNPHFGKTWKESLVLDGENLATESNLPFSVYASQFRLEKETHSHLLFAS GAGHFGLFSGQAAVVEVRLWESLLQETEKKSEHPKDRAVPFWESLFGQKSLTLLPIQNDEESLPRVRRRIIQTLTETTCQ YVGADHGGKLRVGGPAHFSVLAENPLKRTSGIFPIESMVLGGKLVYTSKPTKEGTAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51084; Mature: 51084
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRRLLSLTLFLSAIAPSILLSQNLKFRSVRIWDSEKANFSGFVDVDVNQGKIVSIKNA CCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECC KETKNPEYLLPGFCDASVTLGTNSLGGKTTRTEFPKVLSGFLSAGFSHIESVADPNLSAL CCCCCCCEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH STEISKSKWNAPILSQSQKPHLYPELPLGEGAIYQSGLKGNVDPKRNRHVPIFLKENENK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCC GFSQTELFSKRKELETNGQLAVAYTFADQTSWEDALDTGFSVLFHPMPEGTNLFRAQKRD CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHCC FLWAPLFGIVYLQELRGKPDEWKEEQKIWSELNPHFGKTWKESLVLDGENLATESNLPFS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCCHH VYASQFRLEKETHSHLLFASGAGHFGLFSGQAAVVEVRLWESLLQETEKKSEHPKDRAVP HHHHHHHHHHHHCCEEEEECCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCC FWESLFGQKSLTLLPIQNDEESLPRVRRRIIQTLTETTCQYVGADHGGKLRVGGPAHFSV HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEE LAENPLKRTSGIFPIESMVLGGKLVYTSKPTKEGTAK EECCCHHHHCCCCCHHHHHCCCEEEEECCCCCCCCCC >Mature Secondary Structure MKNRRLLSLTLFLSAIAPSILLSQNLKFRSVRIWDSEKANFSGFVDVDVNQGKIVSIKNA CCCCEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEECCCCEEEEEECC KETKNPEYLLPGFCDASVTLGTNSLGGKTTRTEFPKVLSGFLSAGFSHIESVADPNLSAL CCCCCCCEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH STEISKSKWNAPILSQSQKPHLYPELPLGEGAIYQSGLKGNVDPKRNRHVPIFLKENENK HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEECCCCC GFSQTELFSKRKELETNGQLAVAYTFADQTSWEDALDTGFSVLFHPMPEGTNLFRAQKRD CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHCC FLWAPLFGIVYLQELRGKPDEWKEEQKIWSELNPHFGKTWKESLVLDGENLATESNLPFS CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHEEECCCCCCCCCCCCHH VYASQFRLEKETHSHLLFASGAGHFGLFSGQAAVVEVRLWESLLQETEKKSEHPKDRAVP HHHHHHHHHHHHCCEEEEECCCCCCEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCC FWESLFGQKSLTLLPIQNDEESLPRVRRRIIQTLTETTCQYVGADHGGKLRVGGPAHFSV HHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEE LAENPLKRTSGIFPIESMVLGGKLVYTSKPTKEGTAK EECCCHHHHCCCCCHHHHHCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA