Click here to switch to the map view.

The map label for this gene is 183220219

Identifier: 183220219

GI number: 183220219

Start: 825803

End: 827902

Strand: Direct

Name: 183220219

Synonym: LEPBI_I0811

Alternate gene names: NA

Gene position: 825803-827902 (Clockwise)

Preceding gene: 183220218

Following gene: 183220220

Centisome position: 22.94

GC content: 37.38

Gene sequence:

>2100_bases
GTGGGACTCCTAGACCGGGCCGAAGAAATTAATAAAACTTCGGAAGCTAAAGTATCCTCATCTCCCACTCCCAAAAAAGA
ATCCCCTTCGTTACTCAAAAAAGCTGAACATTTTCGAGAAGAAGAACTACCTAATCATCAAAGTTTGGCGGAGCCAGTAA
CTGTTTCAGATTCAGACTCTGATTGGTTAGAAGATGCGATTTCTGATACACTGGCTACCGAAATTGGAGACTTACCAAAT
CCAGACGGAGAAGAAGAATTTGATTTAAGTGATATCCCAGAATTAACAGATTCCGACTTCGGAGATTTGAGTGAAAGCCA
TGATGATTGGAAAGAAAATCCTGTATCCAATTTAGAAGACGATTTGGATTCCATTCATGATGAAACAAATCCATATGAAC
CAGTTGAACCTGATTTAGGTGATGACCTTGTCGAACGTGATTACCATGATGATTTATTAGAAGCGGATGCACCTCTTCCT
GAAGTCAATTTATTTGATGAATGGGAAAACGAAGCCAAAAAAGAAGCCGCCAAGCAACCGTTACGTCAATCAAAAGAAGA
CCCAGCTCCGATTGGCGAAGAAGTATTATTTGATGATGAGTCCGATTTTGGAACTGCACCGATGTCTTACCATCTAGCGT
CCAAAAAACGGATCGAAAATTACCAAGCCATATTTGAAATCACAAAGGAGATTGCTTCTTCCAAAGAGTTCTCAGATTTT
TTTGATAATCTAGTTTATAGTTTAATCGGGCAAGTTGGTTGCCAATCTGTTGTTATTTTAACATCTACCAATCCAAAGAA
TTTGAAATGGGAAGCAATCGCCGCGCAAGGGATCCAATCAAAAGACTCTTGGTATCTGACACCAGGTGACGAAATTTATG
CACGGATTTCTGATTCCGAAACAGTAATTTACGCAGGTGAGTTTAAGTCTTCACGTTTACCAAACAGAGAATTGAATTTG
TTGAAAGAAATGGAATCTGAGATTCTTGTCCCCATTCGACATGGTGACAAATGTTTCGGAGTATTATCACTCGGAAAACT
CATCAATGGTGAAGAATACATTACAGATGATTTAGAATTTGCTAAAATTGTTGGTGATATTGCCGGTTCTGTTTTTGAAA
GAGTTTCGGAATTTGAAGCCATCAATGATGAATTGGTGCATGCCAAAGAAGTCATTGAAATCAATGAATCTGTTCTACAA
TTTGCACGTGACTTTTCCAAAGTTCGTAAGATGGATGAAGCTTATGACTTTTTAATTGATAACATCAAAAACAAATTAGG
TGTAAAACAGTTTTCCTTTTTAGTCCTAGATTCAGAAACCAGATCCGATTATATTGTGTTTGGATCAAATTTCATATTAC
CAGAACGAACAAAAGACTTCCGACTCAGTAAAGATTCGGATATCATTGGGATGGTTTCCAATGTTTCAGGAGTGTATAAG
TTAGAGAATTTCAGAGAGGACTCTGAATTAAAATCTATTTTCACAAATGACGAATTGGGTATTATGAGCGAATTTACGAT
ACTCCCAATTATCAACTTAAACTGGTTAGTTGGTATGGTCATCATCCACTCGACAGGTTCTGCTTGGACAGATACAACTC
GAGATGTGGCAGTGTCGTTATTGGAAACATCAGCTCCAGTGTTTGCCAATTTACTAATCCTCCAGGAAAAAGAAGCACTT
TTTAGAAACCCATTCAATCCACTGGAATCAAGGATTTTATTGGAAATTGAGAAGGCATCAACTCTCAAAGCATCATTTAC
TGTTTCCTTATTCAAAATCCAAAATGTTTCCAGAATGATCCATCTAGTTGGCACAGGTACATTTGCTCGTTATGCAGATA
CATTAAGAAAAACAATGATGGATCACATCAGCGAATTGGATTTTTTTACACGGGTTGGACAGGGCAAATTTGTTTTAGTT
TTACATGGGAAAGACAAAGAAGAAACAGATGTTGTGATCAAAAAAATCAAATCATCTTTTGCGAAAAAAGAAGAAGCCAT
CATTGGGAATTTCCGGGCAAGTTACCGTGTATTAACTTTGGCATATCCACATGATACAAAGGACAAAAATCAATTTTTGG
AAATGGTTGAAGAAGCCTAA

Upstream 100 bases:

>100_bases
AATTTACTTGGAAATCTACCAGACGAGGTCATCCGAGAGTTCTCGAAATCACAATACTTCGAGTTATACAAAAAAATGAT
GAAAGAATTGGAGATATAAA

Downstream 100 bases:

>100_bases
TCAATTCTTGTGTTATTCAACTCCCTGACGTTTCTTTTACATTTTTTTGTATTCTACTTAATTTATTATTACTCATCATT
TCGGATTCGAAAACTACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: CGMP-Specific Phosphodiesterase

Number of amino acids: Translated: 699; Mature: 698

Protein sequence:

>699_residues
MGLLDRAEEINKTSEAKVSSSPTPKKESPSLLKKAEHFREEELPNHQSLAEPVTVSDSDSDWLEDAISDTLATEIGDLPN
PDGEEEFDLSDIPELTDSDFGDLSESHDDWKENPVSNLEDDLDSIHDETNPYEPVEPDLGDDLVERDYHDDLLEADAPLP
EVNLFDEWENEAKKEAAKQPLRQSKEDPAPIGEEVLFDDESDFGTAPMSYHLASKKRIENYQAIFEITKEIASSKEFSDF
FDNLVYSLIGQVGCQSVVILTSTNPKNLKWEAIAAQGIQSKDSWYLTPGDEIYARISDSETVIYAGEFKSSRLPNRELNL
LKEMESEILVPIRHGDKCFGVLSLGKLINGEEYITDDLEFAKIVGDIAGSVFERVSEFEAINDELVHAKEVIEINESVLQ
FARDFSKVRKMDEAYDFLIDNIKNKLGVKQFSFLVLDSETRSDYIVFGSNFILPERTKDFRLSKDSDIIGMVSNVSGVYK
LENFREDSELKSIFTNDELGIMSEFTILPIINLNWLVGMVIIHSTGSAWTDTTRDVAVSLLETSAPVFANLLILQEKEAL
FRNPFNPLESRILLEIEKASTLKASFTVSLFKIQNVSRMIHLVGTGTFARYADTLRKTMMDHISELDFFTRVGQGKFVLV
LHGKDKEETDVVIKKIKSSFAKKEEAIIGNFRASYRVLTLAYPHDTKDKNQFLEMVEEA

Sequences:

>Translated_699_residues
MGLLDRAEEINKTSEAKVSSSPTPKKESPSLLKKAEHFREEELPNHQSLAEPVTVSDSDSDWLEDAISDTLATEIGDLPN
PDGEEEFDLSDIPELTDSDFGDLSESHDDWKENPVSNLEDDLDSIHDETNPYEPVEPDLGDDLVERDYHDDLLEADAPLP
EVNLFDEWENEAKKEAAKQPLRQSKEDPAPIGEEVLFDDESDFGTAPMSYHLASKKRIENYQAIFEITKEIASSKEFSDF
FDNLVYSLIGQVGCQSVVILTSTNPKNLKWEAIAAQGIQSKDSWYLTPGDEIYARISDSETVIYAGEFKSSRLPNRELNL
LKEMESEILVPIRHGDKCFGVLSLGKLINGEEYITDDLEFAKIVGDIAGSVFERVSEFEAINDELVHAKEVIEINESVLQ
FARDFSKVRKMDEAYDFLIDNIKNKLGVKQFSFLVLDSETRSDYIVFGSNFILPERTKDFRLSKDSDIIGMVSNVSGVYK
LENFREDSELKSIFTNDELGIMSEFTILPIINLNWLVGMVIIHSTGSAWTDTTRDVAVSLLETSAPVFANLLILQEKEAL
FRNPFNPLESRILLEIEKASTLKASFTVSLFKIQNVSRMIHLVGTGTFARYADTLRKTMMDHISELDFFTRVGQGKFVLV
LHGKDKEETDVVIKKIKSSFAKKEEAIIGNFRASYRVLTLAYPHDTKDKNQFLEMVEEA
>Mature_698_residues
GLLDRAEEINKTSEAKVSSSPTPKKESPSLLKKAEHFREEELPNHQSLAEPVTVSDSDSDWLEDAISDTLATEIGDLPNP
DGEEEFDLSDIPELTDSDFGDLSESHDDWKENPVSNLEDDLDSIHDETNPYEPVEPDLGDDLVERDYHDDLLEADAPLPE
VNLFDEWENEAKKEAAKQPLRQSKEDPAPIGEEVLFDDESDFGTAPMSYHLASKKRIENYQAIFEITKEIASSKEFSDFF
DNLVYSLIGQVGCQSVVILTSTNPKNLKWEAIAAQGIQSKDSWYLTPGDEIYARISDSETVIYAGEFKSSRLPNRELNLL
KEMESEILVPIRHGDKCFGVLSLGKLINGEEYITDDLEFAKIVGDIAGSVFERVSEFEAINDELVHAKEVIEINESVLQF
ARDFSKVRKMDEAYDFLIDNIKNKLGVKQFSFLVLDSETRSDYIVFGSNFILPERTKDFRLSKDSDIIGMVSNVSGVYKL
ENFREDSELKSIFTNDELGIMSEFTILPIINLNWLVGMVIIHSTGSAWTDTTRDVAVSLLETSAPVFANLLILQEKEALF
RNPFNPLESRILLEIEKASTLKASFTVSLFKIQNVSRMIHLVGTGTFARYADTLRKTMMDHISELDFFTRVGQGKFVLVL
HGKDKEETDVVIKKIKSSFAKKEEAIIGNFRASYRVLTLAYPHDTKDKNQFLEMVEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 78969; Mature: 78838

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLDRAEEINKTSEAKVSSSPTPKKESPSLLKKAEHFREEELPNHQSLAEPVTVSDSDS
CCCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCH
DWLEDAISDTLATEIGDLPNPDGEEEFDLSDIPELTDSDFGDLSESHDDWKENPVSNLED
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH
DLDSIHDETNPYEPVEPDLGDDLVERDYHDDLLEADAPLPEVNLFDEWENEAKKEAAKQP
HHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LRQSKEDPAPIGEEVLFDDESDFGTAPMSYHLASKKRIENYQAIFEITKEIASSKEFSDF
HHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FDNLVYSLIGQVGCQSVVILTSTNPKNLKWEAIAAQGIQSKDSWYLTPGDEIYARISDSE
HHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCEEECCCHHEEEEECCCC
TVIYAGEFKSSRLPNRELNLLKEMESEILVPIRHGDKCFGVLSLGKLINGEEYITDDLEF
EEEEECCCCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHCHHHH
AKIVGDIAGSVFERVSEFEAINDELVHAKEVIEINESVLQFARDFSKVRKMDEAYDFLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIKNKLGVKQFSFLVLDSETRSDYIVFGSNFILPERTKDFRLSKDSDIIGMVSNVSGVYK
HHHHHHCCCCEEEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCEEEHHCCCCHHH
LENFREDSELKSIFTNDELGIMSEFTILPIINLNWLVGMVIIHSTGSAWTDTTRDVAVSL
HHHCCCHHHHHHHHCCCCCCCHHCEEEEEECCHHHHHHHHHEECCCCCCCCCHHHHHHHH
LETSAPVFANLLILQEKEALFRNPFNPLESRILLEIEKASTLKASFTVSLFKIQNVSRMI
HHHCCHHHHHHHHHCCHHHHHCCCCCHHCHHEEEEECCCCCEEHHHEEEHHHHHHHHHHH
HLVGTGTFARYADTLRKTMMDHISELDFFTRVGQGKFVLVLHGKDKEETDVVIKKIKSSF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AKKEEAIIGNFRASYRVLTLAYPHDTKDKNQFLEMVEEA
HHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GLLDRAEEINKTSEAKVSSSPTPKKESPSLLKKAEHFREEELPNHQSLAEPVTVSDSDS
CCCHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCEECCCCH
DWLEDAISDTLATEIGDLPNPDGEEEFDLSDIPELTDSDFGDLSESHDDWKENPVSNLED
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHH
DLDSIHDETNPYEPVEPDLGDDLVERDYHDDLLEADAPLPEVNLFDEWENEAKKEAAKQP
HHHHHCCCCCCCCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
LRQSKEDPAPIGEEVLFDDESDFGTAPMSYHLASKKRIENYQAIFEITKEIASSKEFSDF
HHHCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FDNLVYSLIGQVGCQSVVILTSTNPKNLKWEAIAAQGIQSKDSWYLTPGDEIYARISDSE
HHHHHHHHHHHHCCCEEEEEECCCCCCCEEHHHHHCCCCCCCCEEECCCHHEEEEECCCC
TVIYAGEFKSSRLPNRELNLLKEMESEILVPIRHGDKCFGVLSLGKLINGEEYITDDLEF
EEEEECCCCCCCCCCHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCCHHHHCHHHH
AKIVGDIAGSVFERVSEFEAINDELVHAKEVIEINESVLQFARDFSKVRKMDEAYDFLID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NIKNKLGVKQFSFLVLDSETRSDYIVFGSNFILPERTKDFRLSKDSDIIGMVSNVSGVYK
HHHHHHCCCCEEEEEEECCCCCCEEEECCCEECCCCCCCCCCCCCCCCEEEHHCCCCHHH
LENFREDSELKSIFTNDELGIMSEFTILPIINLNWLVGMVIIHSTGSAWTDTTRDVAVSL
HHHCCCHHHHHHHHCCCCCCCHHCEEEEEECCHHHHHHHHHEECCCCCCCCCHHHHHHHH
LETSAPVFANLLILQEKEALFRNPFNPLESRILLEIEKASTLKASFTVSLFKIQNVSRMI
HHHCCHHHHHHHHHCCHHHHHCCCCCHHCHHEEEEECCCCCEEHHHEEEHHHHHHHHHHH
HLVGTGTFARYADTLRKTMMDHISELDFFTRVGQGKFVLVLHGKDKEETDVVIKKIKSSF
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHH
AKKEEAIIGNFRASYRVLTLAYPHDTKDKNQFLEMVEEA
HHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA